RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 CFTRP13569 1480 aa26.92■■□□□ 1.9
NKX3-2-201ENST00000382438 FAM13BQ9NYF5 915 aa26.89■■□□□ 1.89
NKX3-2-201ENST00000382438 ROCK2O75116 1388 aaKnown RBP26.88■■□□□ 1.89
NKX3-2-201ENST00000382438 IGHDP01880 384 aa26.87■■□□□ 1.89
NKX3-2-201ENST00000382438 RIPK4P57078 832 aa26.85■■□□□ 1.89
NKX3-2-201ENST00000382438 ST20-MTHFSA0A0A6YYL1 179 aa26.85■■□□□ 1.89
NKX3-2-201ENST00000382438 CARD11Q9BXL7 1154 aa26.83■■□□□ 1.89
NKX3-2-201ENST00000382438 ZHX1Q9UKY1 873 aaPredicted RBP26.83■■□□□ 1.89
NKX3-2-201ENST00000382438 CC2D1BQ5T0F9 858 aaKnown RBP26.82■■□□□ 1.88
NKX3-2-201ENST00000382438 PDE4CQ08493 712 aa26.81■■□□□ 1.88
NKX3-2-201ENST00000382438 GAS2L3Q86XJ1 694 aa26.81■■□□□ 1.88
NKX3-2-201ENST00000382438 PRDM10Q9NQV6 1147 aa26.8■■□□□ 1.88
NKX3-2-201ENST00000382438 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
NKX3-2-201ENST00000382438 DUSP27Q5VZP5 1158 aa26.78■■□□□ 1.88
NKX3-2-201ENST00000382438 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.76■■□□□ 1.87
NKX3-2-201ENST00000382438 NLRP1Q9C000 1473 aa26.75■■□□□ 1.87
NKX3-2-201ENST00000382438 UPF2Q9HAU5 1272 aaKnown RBP26.74■■□□□ 1.87
NKX3-2-201ENST00000382438 KDM5CP41229 1560 aa26.73■■□□□ 1.87
NKX3-2-201ENST00000382438 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
NKX3-2-201ENST00000382438 TBC1D32Q96NH3 1257 aa26.73■■□□□ 1.87
NKX3-2-201ENST00000382438 PARD3Q8TEW0 1356 aa26.73■■□□□ 1.87
NKX3-2-201ENST00000382438 R3HCC1Q9Y3T6 440 aaKnown RBP26.72■■□□□ 1.87
NKX3-2-201ENST00000382438 CHMP5Q9NZZ3 219 aa26.72■■□□□ 1.87
NKX3-2-201ENST00000382438 ADAMTS8Q9UP79 889 aa26.71■■□□□ 1.87
NKX3-2-201ENST00000382438 KDM2AQ9Y2K7 1162 aa26.71■■□□□ 1.87
NKX3-2-201ENST00000382438 OFD1O75665 1012 aa26.7■■□□□ 1.86
NKX3-2-201ENST00000382438 BCAR3O75815 825 aa26.7■■□□□ 1.86
NKX3-2-201ENST00000382438 BLMP54132 1417 aaPredicted RBP26.68■■□□□ 1.86
NKX3-2-201ENST00000382438 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
NKX3-2-201ENST00000382438 SUPT6HQ7KZ85 1726 aaKnown RBP26.67■■□□□ 1.86
NKX3-2-201ENST00000382438 PLEKHH1Q9ULM0 1364 aa26.67■■□□□ 1.86
NKX3-2-201ENST00000382438 ZSCAN30Q86W11 494 aa26.64■■□□□ 1.86
NKX3-2-201ENST00000382438 MAPK8IP3Q9UPT6 1336 aa26.64■■□□□ 1.86
NKX3-2-201ENST00000382438 SMAP1Q8IYB5 467 aaPredicted RBP26.64■■□□□ 1.85
NKX3-2-201ENST00000382438 EFCAB5A4FU69 1503 aa26.64■■□□□ 1.85
NKX3-2-201ENST00000382438 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
NKX3-2-201ENST00000382438 ZMYM4Q5VZL5 1548 aa26.63■■□□□ 1.85
NKX3-2-201ENST00000382438 MSNP26038 577 aaKnown RBP26.63■■□□□ 1.85
NKX3-2-201ENST00000382438 GOLGA2Q08379 1002 aa26.63■■□□□ 1.85
NKX3-2-201ENST00000382438 VIRMAQ69YN4 1812 aaKnown RBP26.63■■□□□ 1.85
NKX3-2-201ENST00000382438 DDX11L8A8MPP1 907 aa26.62■■□□□ 1.85
NKX3-2-201ENST00000382438 PER1O15534 1290 aaPredicted RBP26.62■■□□□ 1.85
NKX3-2-201ENST00000382438 LRRIQ1Q96JM4 1722 aa26.62■■□□□ 1.85
NKX3-2-201ENST00000382438 UGGT2Q9NYU1 1516 aa26.62■■□□□ 1.85
NKX3-2-201ENST00000382438 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.62■■□□□ 1.85
NKX3-2-201ENST00000382438 ARID3CA6NKF2 412 aa26.61■■□□□ 1.85
NKX3-2-201ENST00000382438 BBXQ8WY36 941 aaPredicted RBP26.61■■□□□ 1.85
NKX3-2-201ENST00000382438 MAP7D2Q96T17 732 aa26.61■■□□□ 1.85
NKX3-2-201ENST00000382438 BCL11BQ9C0K0 894 aaPredicted RBP26.61■■□□□ 1.85
NKX3-2-201ENST00000382438 ISY1Q9ULR0 285 aaKnown RBP26.61■■□□□ 1.85
NKX3-2-201ENST00000382438 UQCRHLA0A096LP55 91 aa26.59■■□□□ 1.85
NKX3-2-201ENST00000382438 UQCRHP07919 91 aa26.59■■□□□ 1.85
NKX3-2-201ENST00000382438 TCOF1Q13428 1488 aaKnown RBP26.58■■□□□ 1.85
NKX3-2-201ENST00000382438 EIF3AQ14152 1382 aaKnown RBP26.58■■□□□ 1.85
NKX3-2-201ENST00000382438 COG6Q9Y2V7 657 aa26.57■■□□□ 1.84
NKX3-2-201ENST00000382438 SPINK5Q9NQ38 1064 aaPredicted RBP26.57■■□□□ 1.84
NKX3-2-201ENST00000382438 MAGI3Q5TCQ9 1506 aa26.56■■□□□ 1.84
NKX3-2-201ENST00000382438 CCDC173Q0VFZ6 552 aa26.55■■□□□ 1.84
NKX3-2-201ENST00000382438 PANK1Q8TE04 598 aa26.55■■□□□ 1.84
NKX3-2-201ENST00000382438 EHBP1L1Q8N3D4 1523 aa26.55■■□□□ 1.84
NKX3-2-201ENST00000382438 NASPP49321 788 aaPredicted RBP26.54■■□□□ 1.84
NKX3-2-201ENST00000382438 XPCQ01831 940 aaPredicted RBP26.54■■□□□ 1.84
NKX3-2-201ENST00000382438 PKD2Q13563 968 aa26.54■■□□□ 1.84
NKX3-2-201ENST00000382438 KIF14Q15058 1648 aa26.53■■□□□ 1.84
NKX3-2-201ENST00000382438 CLUAP1Q96AJ1 413 aa26.53■■□□□ 1.84
NKX3-2-201ENST00000382438 MFAP1P55081 439 aaKnown RBP26.53■■□□□ 1.84
NKX3-2-201ENST00000382438 PLEKHH2Q8IVE3 1493 aa26.53■■□□□ 1.84
NKX3-2-201ENST00000382438 SLFN5Q08AF3 891 aa26.52■■□□□ 1.84
NKX3-2-201ENST00000382438 TNPO1Q92973 898 aaKnown RBP26.52■■□□□ 1.84
NKX3-2-201ENST00000382438 ZNF692Q9BU19 519 aaPredicted RBP26.52■■□□□ 1.84
NKX3-2-201ENST00000382438 PPP1R9BQ96SB3 815 aa26.51■■□□□ 1.83
NKX3-2-201ENST00000382438 TERF1P54274 439 aa26.5■■□□□ 1.83
NKX3-2-201ENST00000382438 C22orf23Q9BZE7 217 aa26.5■■□□□ 1.83
NKX3-2-201ENST00000382438 ZNF644Q9H582 1327 aaPredicted RBP26.5■■□□□ 1.83
NKX3-2-201ENST00000382438 WDR43Q15061 677 aaKnown RBP eCLIP26.49■■□□□ 1.836e-7■■■■■ 42.7
NKX3-2-201ENST00000382438 PANK3Q9H999 370 aa26.49■■□□□ 1.83
NKX3-2-201ENST00000382438 CCDC146Q8IYE0 955 aa26.49■■□□□ 1.83
NKX3-2-201ENST00000382438 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
NKX3-2-201ENST00000382438 CANXP27824 592 aaKnown RBP26.48■■□□□ 1.83
NKX3-2-201ENST00000382438 GTF2E1P29083 439 aaPredicted RBP26.48■■□□□ 1.83
NKX3-2-201ENST00000382438 PDZRN3Q9UPQ7 1066 aa26.48■■□□□ 1.83
NKX3-2-201ENST00000382438 ZNF521Q96K83 1311 aa26.48■■□□□ 1.83
NKX3-2-201ENST00000382438 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
NKX3-2-201ENST00000382438 ANP32BQ92688 251 aaKnown RBP26.47■■□□□ 1.83
NKX3-2-201ENST00000382438 RALGAPBQ86X10 1494 aa26.47■■□□□ 1.83
NKX3-2-201ENST00000382438 DMTNQ08495 405 aa26.46■■□□□ 1.83
NKX3-2-201ENST00000382438 HSCBQ8IWL3 235 aa26.46■■□□□ 1.83
NKX3-2-201ENST00000382438 E9PCH4 1651 aa26.46■■□□□ 1.83
NKX3-2-201ENST00000382438 PZPP20742 1482 aa26.45■■□□□ 1.83
NKX3-2-201ENST00000382438 CGNL1Q0VF96 1302 aa26.44■■□□□ 1.82
NKX3-2-201ENST00000382438 FOXD4L1Q9NU39 408 aa26.43■■□□□ 1.82
NKX3-2-201ENST00000382438 ZSCAN20P17040 1043 aaPredicted RBP26.43■■□□□ 1.82
NKX3-2-201ENST00000382438 INSRP06213 1382 aa26.42■■□□□ 1.82
NKX3-2-201ENST00000382438 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
NKX3-2-201ENST00000382438 PCDHB15Q9Y5E8 787 aa26.42■■□□□ 1.82
NKX3-2-201ENST00000382438 STAC3Q96MF2 364 aa26.41■■□□□ 1.82
NKX3-2-201ENST00000382438 DAPK1P53355 1430 aa26.41■■□□□ 1.82
NKX3-2-201ENST00000382438 ZBTB7CA1YPR0 619 aa26.41■■□□□ 1.82
NKX3-2-201ENST00000382438 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
NKX3-2-201ENST00000382438 CHMP4BQ9H444 224 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms