RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 RAPGEF3O95398 923 aa15.73■□□□□ 0.11
FAM239A-201ENST00000381108 PPP1R15AO75807 674 aaPredicted RBP15.73■□□□□ 0.11
FAM239A-201ENST00000381108 KDM5CP41229 1560 aa15.73■□□□□ 0.11
FAM239A-201ENST00000381108 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
FAM239A-201ENST00000381108 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
FAM239A-201ENST00000381108 HECW2Q9P2P5 1572 aa15.71■□□□□ 0.11
FAM239A-201ENST00000381108 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
FAM239A-201ENST00000381108 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
FAM239A-201ENST00000381108 PPRC1Q5VV67 1664 aaKnown RBP15.69■□□□□ 0.1
FAM239A-201ENST00000381108 RICTORQ6R327 1708 aa15.68■□□□□ 0.1
FAM239A-201ENST00000381108 KIF3BO15066 747 aa15.68■□□□□ 0.1
FAM239A-201ENST00000381108 L3MBTL2Q969R5 705 aa15.68■□□□□ 0.1
FAM239A-201ENST00000381108 MLH3Q9UHC1 1453 aa15.67■□□□□ 0.1
FAM239A-201ENST00000381108 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
FAM239A-201ENST00000381108 ABCA6Q8N139 1617 aa15.67■□□□□ 0.1
FAM239A-201ENST00000381108 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
FAM239A-201ENST00000381108 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
FAM239A-201ENST00000381108 A2MP01023 1474 aa15.66■□□□□ 0.1
FAM239A-201ENST00000381108 TEX14Q8IWB6 1497 aa15.66■□□□□ 0.1
FAM239A-201ENST00000381108 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
FAM239A-201ENST00000381108 EIF2AK4Q9P2K8 1649 aaKnown RBP15.66■□□□□ 0.1
FAM239A-201ENST00000381108 FRMPD1Q5SYB0 1578 aa15.64■□□□□ 0.09
FAM239A-201ENST00000381108 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
FAM239A-201ENST00000381108 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
FAM239A-201ENST00000381108 DIP2CQ9Y2E4 1556 aa15.61■□□□□ 0.09
FAM239A-201ENST00000381108 KANK1Q14678 1352 aa15.61■□□□□ 0.09
FAM239A-201ENST00000381108 E9PCH4 1651 aa15.61■□□□□ 0.09
FAM239A-201ENST00000381108 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
FAM239A-201ENST00000381108 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
FAM239A-201ENST00000381108 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
FAM239A-201ENST00000381108 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
FAM239A-201ENST00000381108 TET3O43151 1660 aa15.58■□□□□ 0.08
FAM239A-201ENST00000381108 VWDEQ8N2E2 1590 aa15.58■□□□□ 0.08
FAM239A-201ENST00000381108 GGT6Q6P531 493 aa15.58■□□□□ 0.08
FAM239A-201ENST00000381108 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
FAM239A-201ENST00000381108 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
FAM239A-201ENST00000381108 CEP152O94986 1710 aa15.57■□□□□ 0.08
FAM239A-201ENST00000381108 NBPF8Q3BBV2 869 aa15.56■□□□□ 0.08
FAM239A-201ENST00000381108 ZMYM4Q5VZL5 1548 aa15.56■□□□□ 0.08
FAM239A-201ENST00000381108 SPHKAPQ2M3C7 1700 aa15.55■□□□□ 0.08
FAM239A-201ENST00000381108 ATP10AO60312 1499 aa15.54■□□□□ 0.08
FAM239A-201ENST00000381108 BCORL1Q5H9F3 1711 aa15.53■□□□□ 0.08
FAM239A-201ENST00000381108 RGL3Q3MIN7 710 aa15.53■□□□□ 0.08
FAM239A-201ENST00000381108 KDM2AQ9Y2K7 1162 aa15.53■□□□□ 0.08
FAM239A-201ENST00000381108 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
FAM239A-201ENST00000381108 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.08
FAM239A-201ENST00000381108 DCAF11Q8TEB1 546 aa15.52■□□□□ 0.07
FAM239A-201ENST00000381108 TRPM2O94759 1503 aa15.51■□□□□ 0.07
FAM239A-201ENST00000381108 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
FAM239A-201ENST00000381108 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
FAM239A-201ENST00000381108 CLTCL1P53675 1640 aa15.49■□□□□ 0.07
FAM239A-201ENST00000381108 CFAP65Q6ZU64 1925 aaKnown RBP15.48■□□□□ 0.07
FAM239A-201ENST00000381108 PTPRTO14522 1441 aa15.48■□□□□ 0.07
FAM239A-201ENST00000381108 ABCC3O15438 1527 aa15.48■□□□□ 0.07
FAM239A-201ENST00000381108 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
FAM239A-201ENST00000381108 UGGT1Q9NYU2 1555 aa15.48■□□□□ 0.07
FAM239A-201ENST00000381108 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
FAM239A-201ENST00000381108 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.07
FAM239A-201ENST00000381108 EIF4G2P78344 907 aaKnown RBP eCLIP15.45■□□□□ 0.06
FAM239A-201ENST00000381108 NPATQ14207 1427 aa15.45■□□□□ 0.06
FAM239A-201ENST00000381108 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
FAM239A-201ENST00000381108 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
FAM239A-201ENST00000381108 SIGLEC1Q9BZZ2 1709 aa15.44■□□□□ 0.06
FAM239A-201ENST00000381108 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
FAM239A-201ENST00000381108 ZC3H13Q5T200 1668 aaKnown RBP15.42■□□□□ 0.06
FAM239A-201ENST00000381108 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
FAM239A-201ENST00000381108 MIER1Q8N108 512 aa15.42■□□□□ 0.06
FAM239A-201ENST00000381108 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
FAM239A-201ENST00000381108 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
FAM239A-201ENST00000381108 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
FAM239A-201ENST00000381108 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
FAM239A-201ENST00000381108 MLECQ14165 292 aa15.4■□□□□ 0.06
FAM239A-201ENST00000381108 KIF1BO60333 1816 aa15.4■□□□□ 0.06
FAM239A-201ENST00000381108 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
FAM239A-201ENST00000381108 TRPM1Q7Z4N2 1603 aa15.39■□□□□ 0.05
FAM239A-201ENST00000381108 CENPBP07199 599 aaPredicted RBP15.39■□□□□ 0.05
FAM239A-201ENST00000381108 USP47Q96K76 1375 aa15.38■□□□□ 0.05
FAM239A-201ENST00000381108 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
FAM239A-201ENST00000381108 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
FAM239A-201ENST00000381108 ROCK2O75116 1388 aaKnown RBP15.38■□□□□ 0.05
FAM239A-201ENST00000381108 AGLP35573 1532 aa15.37■□□□□ 0.05
FAM239A-201ENST00000381108 CHGAP10645 457 aaKnown RBP15.37■□□□□ 0.05
FAM239A-201ENST00000381108 CNTLNQ9NXG0 1405 aa15.36■□□□□ 0.05
FAM239A-201ENST00000381108 CLTCQ00610 1675 aaKnown RBP15.35■□□□□ 0.05
FAM239A-201ENST00000381108 SYNMO15061 1565 aa15.35■□□□□ 0.05
FAM239A-201ENST00000381108 MADDQ8WXG6 1647 aa15.34■□□□□ 0.05
FAM239A-201ENST00000381108 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
FAM239A-201ENST00000381108 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
FAM239A-201ENST00000381108 ARID4BQ4LE39 1312 aaPredicted RBP15.33■□□□□ 0.04
FAM239A-201ENST00000381108 NOS1P29475 1434 aa15.33■□□□□ 0.04
FAM239A-201ENST00000381108 ARHGAP31Q2M1Z3 1444 aa15.33■□□□□ 0.04
FAM239A-201ENST00000381108 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
FAM239A-201ENST00000381108 PREX1Q8TCU6 1659 aa15.33■□□□□ 0.04
FAM239A-201ENST00000381108 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
FAM239A-201ENST00000381108 NEURL4Q96JN8 1562 aa15.31■□□□□ 0.04
FAM239A-201ENST00000381108 IFT172Q9UG01 1749 aa15.3■□□□□ 0.04
FAM239A-201ENST00000381108 PIK3C2BO00750 1634 aa15.3■□□□□ 0.04
FAM239A-201ENST00000381108 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
FAM239A-201ENST00000381108 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
FAM239A-201ENST00000381108 POLR1AO95602 1720 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms