RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
SMN1-202ENST00000380707 SETD5Q9C0A6 1442 aa18.99■□□□□ 0.63
SMN1-202ENST00000380707 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
SMN1-202ENST00000380707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMN1-202ENST00000380707 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
SMN1-202ENST00000380707 KDM4FA0A1W2PPD8 638 aa18.95■□□□□ 0.62
SMN1-202ENST00000380707 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
SMN1-202ENST00000380707 DEPDC5O75140 1603 aa18.95■□□□□ 0.62
SMN1-202ENST00000380707 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
SMN1-202ENST00000380707 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
SMN1-202ENST00000380707 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
SMN1-202ENST00000380707 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
SMN1-202ENST00000380707 MADDQ8WXG6 1647 aa18.93■□□□□ 0.62
SMN1-202ENST00000380707 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
SMN1-202ENST00000380707 UNC13BO14795 1591 aa18.92■□□□□ 0.62
SMN1-202ENST00000380707 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
SMN1-202ENST00000380707 NUP155O75694 1391 aa18.9■□□□□ 0.62
SMN1-202ENST00000380707 FER1L4A9Z1Z3 1794 aa18.9■□□□□ 0.62
SMN1-202ENST00000380707 KANK1Q14678 1352 aa18.89■□□□□ 0.62
SMN1-202ENST00000380707 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
SMN1-202ENST00000380707 ABCC3O15438 1527 aa18.89■□□□□ 0.61
SMN1-202ENST00000380707 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
SMN1-202ENST00000380707 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
SMN1-202ENST00000380707 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
SMN1-202ENST00000380707 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
SMN1-202ENST00000380707 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
SMN1-202ENST00000380707 RIMS1Q86UR5 1692 aaKnown RBP18.86■□□□□ 0.61
SMN1-202ENST00000380707 HRCP23327 699 aa18.86■□□□□ 0.61
SMN1-202ENST00000380707 CEP152O94986 1710 aa18.85■□□□□ 0.61
SMN1-202ENST00000380707 ZMYM3Q14202 1370 aa18.85■□□□□ 0.61
SMN1-202ENST00000380707 ZC3H13Q5T200 1668 aaKnown RBP18.84■□□□□ 0.61
SMN1-202ENST00000380707 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
SMN1-202ENST00000380707 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
SMN1-202ENST00000380707 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
SMN1-202ENST00000380707 PTPRMP28827 1452 aa18.83■□□□□ 0.6
SMN1-202ENST00000380707 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
SMN1-202ENST00000380707 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
SMN1-202ENST00000380707 PZPP20742 1482 aa18.81■□□□□ 0.6
SMN1-202ENST00000380707 FOXD1Q16676 465 aa18.81■□□□□ 0.6
SMN1-202ENST00000380707 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
SMN1-202ENST00000380707 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
SMN1-202ENST00000380707 C3P01024 1663 aa18.79■□□□□ 0.6
SMN1-202ENST00000380707 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
SMN1-202ENST00000380707 TET3O43151 1660 aa18.79■□□□□ 0.6
SMN1-202ENST00000380707 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
SMN1-202ENST00000380707 ARHGAP31Q2M1Z3 1444 aa18.78■□□□□ 0.6
SMN1-202ENST00000380707 FBXO31Q5XUX0 539 aaPredicted RBP18.78■□□□□ 0.6
SMN1-202ENST00000380707 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
SMN1-202ENST00000380707 NPATQ14207 1427 aa18.78■□□□□ 0.6
SMN1-202ENST00000380707 PKD2Q13563 968 aa18.75■□□□□ 0.59
SMN1-202ENST00000380707 E9PCH4 1651 aa18.74■□□□□ 0.59
SMN1-202ENST00000380707 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
SMN1-202ENST00000380707 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
SMN1-202ENST00000380707 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
SMN1-202ENST00000380707 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
SMN1-202ENST00000380707 PREX1Q8TCU6 1659 aa18.69■□□□□ 0.58
SMN1-202ENST00000380707 NOS1P29475 1434 aa18.68■□□□□ 0.58
SMN1-202ENST00000380707 TNRQ92752 1358 aa18.68■□□□□ 0.58
SMN1-202ENST00000380707 MSH5O43196 834 aa18.66■□□□□ 0.58
SMN1-202ENST00000380707 PTPRTO14522 1441 aa18.66■□□□□ 0.58
SMN1-202ENST00000380707 SYNMO15061 1565 aa18.65■□□□□ 0.58
SMN1-202ENST00000380707 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
SMN1-202ENST00000380707 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
SMN1-202ENST00000380707 SETD1BQ9UPS6 1966 aaKnown RBP18.63■□□□□ 0.57
SMN1-202ENST00000380707 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
SMN1-202ENST00000380707 IDI1Q13907 227 aa18.62■□□□□ 0.57
SMN1-202ENST00000380707 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
SMN1-202ENST00000380707 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
SMN1-202ENST00000380707 TRPM2O94759 1503 aa18.6■□□□□ 0.57
SMN1-202ENST00000380707 ANKRD30BQ9BXX2 1392 aa18.6■□□□□ 0.57
SMN1-202ENST00000380707 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
SMN1-202ENST00000380707 NLRP1Q9C000 1473 aa18.59■□□□□ 0.57
SMN1-202ENST00000380707 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.57
SMN1-202ENST00000380707 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
SMN1-202ENST00000380707 A2ML1A8K2U0 1454 aa18.56■□□□□ 0.56
SMN1-202ENST00000380707 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
SMN1-202ENST00000380707 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
SMN1-202ENST00000380707 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
SMN1-202ENST00000380707 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
SMN1-202ENST00000380707 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
SMN1-202ENST00000380707 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
SMN1-202ENST00000380707 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
SMN1-202ENST00000380707 HSPA2P54652 639 aa18.5■□□□□ 0.55
SMN1-202ENST00000380707 UBR1Q8IWV7 1749 aa18.5■□□□□ 0.55
SMN1-202ENST00000380707 TMEM131LA2VDJ0 1609 aa18.5■□□□□ 0.55
SMN1-202ENST00000380707 ADGRB3O60242 1522 aa18.5■□□□□ 0.55
SMN1-202ENST00000380707 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
SMN1-202ENST00000380707 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
SMN1-202ENST00000380707 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
SMN1-202ENST00000380707 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
SMN1-202ENST00000380707 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
SMN1-202ENST00000380707 KIF1BO60333 1816 aa18.46■□□□□ 0.55
SMN1-202ENST00000380707 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
SMN1-202ENST00000380707 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
SMN1-202ENST00000380707 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
SMN1-202ENST00000380707 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
SMN1-202ENST00000380707 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
SMN1-202ENST00000380707 SLIT1O75093 1534 aa18.42■□□□□ 0.54
SMN1-202ENST00000380707 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
SMN1-202ENST00000380707 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms