RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 PANK3Q9H999 370 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 EID1Q9Y6B2 187 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 PRKRIP1Q9H875 184 aaPredicted RBP20■□□□□ 0.79
COL2A1-202ENST00000380518 TRAK1Q9UPV9 953 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 CSPP1Q1MSJ5 1256 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 CCDC34Q96HJ3 373 aa20■□□□□ 0.79
COL2A1-202ENST00000380518 AMPHP49418 695 aa19.99■□□□□ 0.79
COL2A1-202ENST00000380518 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
COL2A1-202ENST00000380518 CENPQQ7L2Z9 268 aaPredicted RBP19.98■□□□□ 0.79
COL2A1-202ENST00000380518 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
COL2A1-202ENST00000380518 ST18O60284 1047 aa19.98■□□□□ 0.79
COL2A1-202ENST00000380518 TPM4P67936 248 aa19.98■□□□□ 0.79
COL2A1-202ENST00000380518 TAF7LQ5H9L4 462 aa19.97■□□□□ 0.79
COL2A1-202ENST00000380518 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
COL2A1-202ENST00000380518 CLSTN1O94985 981 aa19.97■□□□□ 0.79
COL2A1-202ENST00000380518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL2A1-202ENST00000380518 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
COL2A1-202ENST00000380518 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
COL2A1-202ENST00000380518 ZBED9Q6R2W3 1325 aa19.94■□□□□ 0.78
COL2A1-202ENST00000380518 E9PSI1 815 aa19.94■□□□□ 0.78
COL2A1-202ENST00000380518 USP35Q9P2H5 1018 aa19.93■□□□□ 0.78
COL2A1-202ENST00000380518 WIZO95785 1651 aa19.93■□□□□ 0.78
COL2A1-202ENST00000380518 FAM161AQ3B820 660 aa19.93■□□□□ 0.78
COL2A1-202ENST00000380518 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
COL2A1-202ENST00000380518 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
COL2A1-202ENST00000380518 KIF3AQ9Y496 699 aa19.92■□□□□ 0.78
COL2A1-202ENST00000380518 PDE4AP27815 886 aa19.91■□□□□ 0.78
COL2A1-202ENST00000380518 CGNL1Q0VF96 1302 aa19.91■□□□□ 0.78
COL2A1-202ENST00000380518 RRP1P56182 461 aaKnown RBP19.91■□□□□ 0.78
COL2A1-202ENST00000380518 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
COL2A1-202ENST00000380518 NOL8Q76FK4 1167 aaKnown RBP19.91■□□□□ 0.78
COL2A1-202ENST00000380518 KIF16BQ96L93 1317 aa19.9■□□□□ 0.78
COL2A1-202ENST00000380518 PHF14O94880 888 aa19.9■□□□□ 0.78
COL2A1-202ENST00000380518 USP47Q96K76 1375 aa19.9■□□□□ 0.78
COL2A1-202ENST00000380518 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
COL2A1-202ENST00000380518 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.78
COL2A1-202ENST00000380518 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.77
COL2A1-202ENST00000380518 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
COL2A1-202ENST00000380518 EXOC6Q8TAG9 804 aa19.88■□□□□ 0.77
COL2A1-202ENST00000380518 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
COL2A1-202ENST00000380518 PLIN1O60240 522 aa19.87■□□□□ 0.77
COL2A1-202ENST00000380518 NGEFQ8N5V2 710 aa19.86■□□□□ 0.77
COL2A1-202ENST00000380518 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
COL2A1-202ENST00000380518 ELL2O00472 640 aaPredicted RBP19.86■□□□□ 0.77
COL2A1-202ENST00000380518 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
COL2A1-202ENST00000380518 TMX4Q9H1E5 349 aaPredicted RBP19.85■□□□□ 0.77
COL2A1-202ENST00000380518 COG3Q96JB2 828 aa19.85■□□□□ 0.77
COL2A1-202ENST00000380518 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
COL2A1-202ENST00000380518 APAF1O14727 1248 aa19.83■□□□□ 0.76
COL2A1-202ENST00000380518 COG6Q9Y2V7 657 aa19.83■□□□□ 0.76
COL2A1-202ENST00000380518 RASSF8Q8NHQ8 419 aa19.82■□□□□ 0.76
COL2A1-202ENST00000380518 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
COL2A1-202ENST00000380518 SF3A1Q15459 793 aaKnown RBP19.82■□□□□ 0.76
COL2A1-202ENST00000380518 RILPL2Q969X0 211 aa19.81■□□□□ 0.76
COL2A1-202ENST00000380518 CHMP4CQ96CF2 233 aa19.81■□□□□ 0.76
COL2A1-202ENST00000380518 ATP6V1DQ9Y5K8 247 aa19.81■□□□□ 0.76
COL2A1-202ENST00000380518 TOMM22Q9NS69 142 aa19.8■□□□□ 0.76
COL2A1-202ENST00000380518 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
COL2A1-202ENST00000380518 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
COL2A1-202ENST00000380518 CCDC9Q9Y3X0 531 aaKnown RBP19.8■□□□□ 0.76
COL2A1-202ENST00000380518 SKOR2Q2VWA4 1001 aaPredicted RBP19.79■□□□□ 0.76
COL2A1-202ENST00000380518 ARID3AQ99856 593 aa19.79■□□□□ 0.76
COL2A1-202ENST00000380518 PTPRGP23470 1445 aa19.79■□□□□ 0.76
COL2A1-202ENST00000380518 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
COL2A1-202ENST00000380518 NOC3LQ8WTT2 800 aaKnown RBP19.79■□□□□ 0.76
COL2A1-202ENST00000380518 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
COL2A1-202ENST00000380518 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
COL2A1-202ENST00000380518 SLC4A3P48751 1232 aa19.77■□□□□ 0.75
COL2A1-202ENST00000380518 TEFQ10587 303 aa19.76■□□□□ 0.75
COL2A1-202ENST00000380518 FRAT2O75474 233 aaPredicted RBP19.76■□□□□ 0.75
COL2A1-202ENST00000380518 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
COL2A1-202ENST00000380518 H3BQV1 296 aa19.75■□□□□ 0.75
COL2A1-202ENST00000380518 C1orf141Q5JVX7 400 aa19.75■□□□□ 0.75
COL2A1-202ENST00000380518 IFFO2Q5TF58 517 aa19.75■□□□□ 0.75
COL2A1-202ENST00000380518 REC8O95072 547 aa19.75■□□□□ 0.75
COL2A1-202ENST00000380518 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
COL2A1-202ENST00000380518 GSE1Q14687 1217 aa19.75■□□□□ 0.75
COL2A1-202ENST00000380518 API5Q9BZZ5 524 aaKnown RBP19.75■□□□□ 0.75
COL2A1-202ENST00000380518 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
COL2A1-202ENST00000380518 FAM184AQ8NB25 1140 aa19.74■□□□□ 0.75
COL2A1-202ENST00000380518 MYOM3Q5VTT5 1437 aa19.73■□□□□ 0.75
COL2A1-202ENST00000380518 DZIP1LQ8IYY4 767 aaKnown RBP19.73■□□□□ 0.75
COL2A1-202ENST00000380518 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
COL2A1-202ENST00000380518 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
COL2A1-202ENST00000380518 TPM3P06753 285 aa19.73■□□□□ 0.75
COL2A1-202ENST00000380518 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.72■□□□□ 0.75
COL2A1-202ENST00000380518 RUFY2Q8WXA3 655 aa19.72■□□□□ 0.75
COL2A1-202ENST00000380518 NEXNQ0ZGT2 675 aa19.72■□□□□ 0.75
COL2A1-202ENST00000380518 GOLGA6L1Q8N7Z2 621 aa19.72■□□□□ 0.75
COL2A1-202ENST00000380518 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
COL2A1-202ENST00000380518 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
COL2A1-202ENST00000380518 CREBRFQ8IUR6 639 aa19.71■□□□□ 0.75
COL2A1-202ENST00000380518 LRRFIP1Q32MZ4 808 aaKnown RBP19.7■□□□□ 0.74
COL2A1-202ENST00000380518 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
COL2A1-202ENST00000380518 G3V3G9 751 aa19.7■□□□□ 0.74
COL2A1-202ENST00000380518 DCAF8Q5TAQ9 597 aa19.7■□□□□ 0.74
COL2A1-202ENST00000380518 RIPK4P57078 832 aa19.7■□□□□ 0.74
COL2A1-202ENST00000380518 GOLGA6L19H0YKK7 550 aa19.69■□□□□ 0.74
COL2A1-202ENST00000380518 ZKSCAN1P17029 563 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms