RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 UNC13BO14795 1591 aa36.54■■■■□ 3.44
TM6SF1-204ENST00000379390 MROH1Q8NDA8 1641 aa36.54■■■■□ 3.44
TM6SF1-204ENST00000379390 PRDM15P57071 1507 aaPredicted RBP36.48■■■■□ 3.43
TM6SF1-204ENST00000379390 MLECQ14165 292 aa36.46■■■■□ 3.43
TM6SF1-204ENST00000379390 GGT6Q6P531 493 aa36.46■■■■□ 3.43
TM6SF1-204ENST00000379390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.44■■■■□ 3.42
TM6SF1-204ENST00000379390 CEP152O94986 1710 aa36.44■■■■□ 3.42
TM6SF1-204ENST00000379390 IQGAP3Q86VI3 1631 aa36.39■■■■□ 3.42
TM6SF1-204ENST00000379390 FER1L4A9Z1Z3 1794 aa36.38■■■■□ 3.41
TM6SF1-204ENST00000379390 TRIM52Q96A61 297 aa36.37■■■■□ 3.41
TM6SF1-204ENST00000379390 VWDEQ8N2E2 1590 aa36.37■■■■□ 3.41
TM6SF1-204ENST00000379390 NUP155O75694 1391 aa36.36■■■■□ 3.41
TM6SF1-204ENST00000379390 KDM5DQ9BY66 1539 aa36.36■■■■□ 3.41
TM6SF1-204ENST00000379390 CLTCQ00610 1675 aaKnown RBP36.35■■■■□ 3.41
TM6SF1-204ENST00000379390 ZC3H13Q5T200 1668 aaKnown RBP36.35■■■■□ 3.41
TM6SF1-204ENST00000379390 KANK1Q14678 1352 aa36.33■■■■□ 3.41
TM6SF1-204ENST00000379390 FAM135AQ9P2D6 1515 aa36.32■■■■□ 3.41
TM6SF1-204ENST00000379390 HRCP23327 699 aa36.32■■■■□ 3.4
TM6SF1-204ENST00000379390 ADAMTSL3P82987 1691 aa36.32■■■■□ 3.4
TM6SF1-204ENST00000379390 ABCC3O15438 1527 aa36.32■■■■□ 3.4
TM6SF1-204ENST00000379390 MADDQ8WXG6 1647 aa36.31■■■■□ 3.4
TM6SF1-204ENST00000379390 PZPP20742 1482 aa36.29■■■■□ 3.4
TM6SF1-204ENST00000379390 CAMSAP1Q5T5Y3 1602 aa36.28■■■■□ 3.4
TM6SF1-204ENST00000379390 TET3O43151 1660 aa36.27■■■■□ 3.4
TM6SF1-204ENST00000379390 WASHC2CQ9Y4E1 1318 aa36.26■■■■□ 3.4
TM6SF1-204ENST00000379390 RIMS1Q86UR5 1692 aaKnown RBP36.25■■■■□ 3.39
TM6SF1-204ENST00000379390 ACIN1Q9UKV3 1341 aaKnown RBP36.23■■■■□ 3.39
TM6SF1-204ENST00000379390 LMTK2Q8IWU2 1503 aa36.22■■■■□ 3.39
TM6SF1-204ENST00000379390 CFAP65Q6ZU64 1925 aaKnown RBP36.22■■■■□ 3.39
TM6SF1-204ENST00000379390 MROH2AA6NES4 1674 aa36.21■■■■□ 3.39
TM6SF1-204ENST00000379390 PPP6R1Q9UPN7 881 aa36.21■■■■□ 3.39
TM6SF1-204ENST00000379390 E9PCH4 1651 aa36.2■■■■□ 3.39
TM6SF1-204ENST00000379390 EFCAB6Q5THR3 1501 aa36.2■■■■□ 3.39
TM6SF1-204ENST00000379390 ESF1Q9H501 851 aaKnown RBP36.19■■■■□ 3.38
TM6SF1-204ENST00000379390 SLC4A1APQ9BWU0 796 aaKnown RBP36.18■■■■□ 3.38
TM6SF1-204ENST00000379390 CNTLNQ9NXG0 1405 aa36.15■■■■□ 3.38
TM6SF1-204ENST00000379390 MPHOSPH9Q99550 1183 aa36.15■■■■□ 3.38
TM6SF1-204ENST00000379390 C3P01024 1663 aa36.13■■■■□ 3.37
TM6SF1-204ENST00000379390 NPATQ14207 1427 aa36.08■■■■□ 3.37
TM6SF1-204ENST00000379390 DHX57Q6P158 1386 aaKnown RBP36.08■■■■□ 3.37
TM6SF1-204ENST00000379390 PKD2Q13563 968 aa36.08■■■■□ 3.37
TM6SF1-204ENST00000379390 ZMYM3Q14202 1370 aa36.06■■■■□ 3.36
TM6SF1-204ENST00000379390 PREX1Q8TCU6 1659 aa36.05■■■■□ 3.36
TM6SF1-204ENST00000379390 FOXD1Q16676 465 aa36.05■■■■□ 3.36
TM6SF1-204ENST00000379390 SPHKAPQ2M3C7 1700 aa36.04■■■■□ 3.36
TM6SF1-204ENST00000379390 ARHGAP31Q2M1Z3 1444 aa36.03■■■■□ 3.36
TM6SF1-204ENST00000379390 RPRD2Q5VT52 1461 aaKnown RBP36.02■■■■□ 3.36
TM6SF1-204ENST00000379390 KDM4FA0A1W2PPD8 638 aa36.01■■■■□ 3.36
TM6SF1-204ENST00000379390 PLPPR3Q6T4P5 718 aa35.99■■■■□ 3.35
TM6SF1-204ENST00000379390 CEBPAP49715 358 aaPredicted RBP35.98■■■■□ 3.35
TM6SF1-204ENST00000379390 PTPRMP28827 1452 aa35.98■■■■□ 3.35
TM6SF1-204ENST00000379390 ERVK-7P63135 1459 aa35.95■■■■□ 3.34
TM6SF1-204ENST00000379390 FBXO31Q5XUX0 539 aaPredicted RBP35.94■■■■□ 3.34
TM6SF1-204ENST00000379390 SPATA31D1Q6ZQQ2 1576 aa35.92■■■■□ 3.34
TM6SF1-204ENST00000379390 SYNMO15061 1565 aa35.91■■■■□ 3.34
TM6SF1-204ENST00000379390 TRPM2O94759 1503 aa35.88■■■■□ 3.33
TM6SF1-204ENST00000379390 NOS1P29475 1434 aa35.88■■■■□ 3.33
TM6SF1-204ENST00000379390 PLA2R1Q13018 1463 aa35.88■■■■□ 3.33
TM6SF1-204ENST00000379390 PTPRTO14522 1441 aa35.87■■■■□ 3.33
TM6SF1-204ENST00000379390 UGGT1Q9NYU2 1555 aa35.86■■■■□ 3.33
TM6SF1-204ENST00000379390 CCER1Q8TC90 406 aaPredicted RBP35.84■■■■□ 3.33
TM6SF1-204ENST00000379390 ANKRD30BQ9BXX2 1392 aa35.84■■■■□ 3.33
TM6SF1-204ENST00000379390 CLTCL1P53675 1640 aa35.83■■■■□ 3.33
TM6SF1-204ENST00000379390 PIK3C2BO00750 1634 aa35.8■■■■□ 3.32
TM6SF1-204ENST00000379390 TNRQ92752 1358 aa35.8■■■■□ 3.32
TM6SF1-204ENST00000379390 SETD1BQ9UPS6 1966 aaKnown RBP35.79■■■■□ 3.32
TM6SF1-204ENST00000379390 MYO3AQ8NEV4 1616 aa35.78■■■■□ 3.32
TM6SF1-204ENST00000379390 CCDC144AA2RUR9 1427 aa35.74■■■■□ 3.31
TM6SF1-204ENST00000379390 KIF1BO60333 1816 aa35.74■■■■□ 3.31
TM6SF1-204ENST00000379390 MYO5BQ9ULV0 1848 aa35.72■■■■□ 3.31
TM6SF1-204ENST00000379390 IDI1Q13907 227 aa35.66■■■■□ 3.3
TM6SF1-204ENST00000379390 SIN3AQ96ST3 1273 aa35.66■■■■□ 3.3
TM6SF1-204ENST00000379390 NLRP1Q9C000 1473 aa35.65■■■■□ 3.3
TM6SF1-204ENST00000379390 ZNF142P52746 1687 aaPredicted RBP35.65■■■■□ 3.3
TM6SF1-204ENST00000379390 SLC52A1Q9NWF4 448 aa35.65■■■■□ 3.3
TM6SF1-204ENST00000379390 CLSPNQ9HAW4 1339 aa35.64■■■■□ 3.3
TM6SF1-204ENST00000379390 UBR1Q8IWV7 1749 aa35.63■■■■□ 3.29
TM6SF1-204ENST00000379390 CEP170BQ9Y4F5 1589 aaPredicted RBP35.63■■■■□ 3.29
TM6SF1-204ENST00000379390 TMEM131LA2VDJ0 1609 aa35.62■■■■□ 3.29
TM6SF1-204ENST00000379390 ADGRB3O60242 1522 aa35.61■■■■□ 3.29
TM6SF1-204ENST00000379390 NEUROD1Q13562 356 aa35.6■■■■□ 3.29
TM6SF1-204ENST00000379390 KDM5AP29375 1690 aaKnown RBP35.58■■■■□ 3.29
TM6SF1-204ENST00000379390 A2ML1A8K2U0 1454 aa35.57■■■■□ 3.29
TM6SF1-204ENST00000379390 UHRF1BP1Q6BDS2 1440 aa35.57■■■■□ 3.28
TM6SF1-204ENST00000379390 CHGAP10645 457 aaKnown RBP35.57■■■■□ 3.28
TM6SF1-204ENST00000379390 SPATA31E1Q6ZUB1 1445 aa35.52■■■■□ 3.28
TM6SF1-204ENST00000379390 STAG3Q9UJ98 1225 aa35.52■■■■□ 3.28
TM6SF1-204ENST00000379390 NEURL4Q96JN8 1562 aa35.49■■■■□ 3.27
TM6SF1-204ENST00000379390 RGL3Q3MIN7 710 aa35.46■■■■□ 3.27
TM6SF1-204ENST00000379390 IFT172Q9UG01 1749 aa35.45■■■■□ 3.27
TM6SF1-204ENST00000379390 PPLO60437 1756 aa35.44■■■■□ 3.26
TM6SF1-204ENST00000379390 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
TM6SF1-204ENST00000379390 ZNF326Q5BKZ1 582 aaKnown RBP35.43■■■■□ 3.26
TM6SF1-204ENST00000379390 NEXMIFQ5QGS0 1516 aa35.39■■■■□ 3.26
TM6SF1-204ENST00000379390 TONSLQ96HA7 1378 aa35.39■■■■□ 3.26
TM6SF1-204ENST00000379390 THEMISQ8N1K5 641 aaPredicted RBP35.35■■■■□ 3.25
TM6SF1-204ENST00000379390 SLIT1O75093 1534 aa35.34■■■■□ 3.25
TM6SF1-204ENST00000379390 TMEM2Q9UHN6 1383 aa35.34■■■■□ 3.25
TM6SF1-204ENST00000379390 RIMS2Q9UQ26 1411 aa35.33■■■■□ 3.25
TM6SF1-204ENST00000379390 L3MBTL2Q969R5 705 aa35.32■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms