RNA–Protein interactions for RNA: ENST00000378593.6

AFF4-202, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-202ENST00000378593 TBC1D12O60347 775 aa9.59□□□□□ -0.87
AFF4-202ENST00000378593 FECHP22830 423 aa9.59□□□□□ -0.87
AFF4-202ENST00000378593 EMP3P54852 163 aa9.59□□□□□ -0.87
AFF4-202ENST00000378593 UPF1Q92900 1129 aaKnown RBP eCLIP9.59□□□□□ -0.87
AFF4-202ENST00000378593 DDX12PQ92771 950 aa9.58□□□□□ -0.88
AFF4-202ENST00000378593 L3MBTL3Q96JM7 780 aaPredicted RBP9.58□□□□□ -0.88
AFF4-202ENST00000378593 FLIIQ13045 1269 aa9.57□□□□□ -0.88
AFF4-202ENST00000378593 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
AFF4-202ENST00000378593 PTGDRQ13258 359 aa9.56□□□□□ -0.88
AFF4-202ENST00000378593 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
AFF4-202ENST00000378593 EVI5O60447 810 aa9.54□□□□□ -0.88
AFF4-202ENST00000378593 PLCG2P16885 1265 aa9.54□□□□□ -0.88
AFF4-202ENST00000378593 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
AFF4-202ENST00000378593 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
AFF4-202ENST00000378593 TTLL12Q14166 644 aaPredicted RBP9.52□□□□□ -0.89
AFF4-202ENST00000378593 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
AFF4-202ENST00000378593 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
AFF4-202ENST00000378593 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
AFF4-202ENST00000378593 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
AFF4-202ENST00000378593 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
AFF4-202ENST00000378593 RNF166Q96A37 237 aaPredicted RBP9.5□□□□□ -0.89
AFF4-202ENST00000378593 MS4A1P11836 297 aa9.49□□□□□ -0.89
AFF4-202ENST00000378593 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
AFF4-202ENST00000378593 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
AFF4-202ENST00000378593 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
AFF4-202ENST00000378593 PCMTD1Q96MG8 357 aaPredicted RBP9.47□□□□□ -0.89
AFF4-202ENST00000378593 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
AFF4-202ENST00000378593 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
AFF4-202ENST00000378593 SLC34A2O95436 690 aa9.46□□□□□ -0.9
AFF4-202ENST00000378593 A6NJR5 290 aa9.45□□□□□ -0.9
AFF4-202ENST00000378593 EPAS1Q99814 870 aa9.45□□□□□ -0.9
AFF4-202ENST00000378593 APBB1O00213 710 aa9.44□□□□□ -0.9
AFF4-202ENST00000378593 PHF14O94880 888 aa9.44□□□□□ -0.9
AFF4-202ENST00000378593 CLCN1P35523 988 aa9.44□□□□□ -0.9
AFF4-202ENST00000378593 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
AFF4-202ENST00000378593 SH3D19Q5HYK7 790 aa9.44□□□□□ -0.9
AFF4-202ENST00000378593 GPCPD1Q9NPB8 672 aa9.42□□□□□ -0.9
AFF4-202ENST00000378593 ARID3AQ99856 593 aa9.41□□□□□ -0.9
AFF4-202ENST00000378593 CDHR5Q9HBB8 845 aa9.41□□□□□ -0.9
AFF4-202ENST00000378593 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
AFF4-202ENST00000378593 ARID3CA6NKF2 412 aa9.4□□□□□ -0.9
AFF4-202ENST00000378593 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
AFF4-202ENST00000378593 MAP3K7O43318 606 aa9.39□□□□□ -0.91
AFF4-202ENST00000378593 TRAK2O60296 914 aa9.39□□□□□ -0.91
AFF4-202ENST00000378593 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
AFF4-202ENST00000378593 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
AFF4-202ENST00000378593 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
AFF4-202ENST00000378593 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
AFF4-202ENST00000378593 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
AFF4-202ENST00000378593 MCM6Q14566 821 aa9.36□□□□□ -0.91
AFF4-202ENST00000378593 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
AFF4-202ENST00000378593 MYT1LQ9UL68 1186 aa9.36□□□□□ -0.91
AFF4-202ENST00000378593 OATP04181 439 aa9.35□□□□□ -0.91
AFF4-202ENST00000378593 TRIM26Q12899 539 aaPredicted RBP9.35□□□□□ -0.91
AFF4-202ENST00000378593 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
AFF4-202ENST00000378593 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
AFF4-202ENST00000378593 C3orf67Q6ZVT6 689 aa9.34□□□□□ -0.91
AFF4-202ENST00000378593 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
AFF4-202ENST00000378593 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
AFF4-202ENST00000378593 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
AFF4-202ENST00000378593 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
AFF4-202ENST00000378593 CERKQ8TCT0 537 aa9.33□□□□□ -0.92
AFF4-202ENST00000378593 HRCP23327 699 aa9.32□□□□□ -0.92
AFF4-202ENST00000378593 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
AFF4-202ENST00000378593 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
AFF4-202ENST00000378593 JPH4Q96JJ6 628 aa9.31□□□□□ -0.92
AFF4-202ENST00000378593 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
AFF4-202ENST00000378593 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
AFF4-202ENST00000378593 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
AFF4-202ENST00000378593 FNBP4Q8N3X1 1017 aaPredicted RBP9.29□□□□□ -0.92
AFF4-202ENST00000378593 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
AFF4-202ENST00000378593 ADGRG1Q9Y653 693 aa9.29□□□□□ -0.92
AFF4-202ENST00000378593 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
AFF4-202ENST00000378593 PROSER2Q86WR7 435 aaPredicted RBP9.28□□□□□ -0.92
AFF4-202ENST00000378593 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
AFF4-202ENST00000378593 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
AFF4-202ENST00000378593 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
AFF4-202ENST00000378593 FOSBP53539 338 aa9.27□□□□□ -0.93
AFF4-202ENST00000378593 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
AFF4-202ENST00000378593 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
AFF4-202ENST00000378593 SPDYE5A6NIY4 337 aa9.26□□□□□ -0.93
AFF4-202ENST00000378593 DIXDC1Q155Q3 683 aa9.26□□□□□ -0.93
AFF4-202ENST00000378593 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
AFF4-202ENST00000378593 RAD21O60216 631 aa9.25□□□□□ -0.93
AFF4-202ENST00000378593 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
AFF4-202ENST00000378593 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
AFF4-202ENST00000378593 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
AFF4-202ENST00000378593 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
AFF4-202ENST00000378593 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
AFF4-202ENST00000378593 ZDHHC16Q969W1 377 aa9.24□□□□□ -0.93
AFF4-202ENST00000378593 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
AFF4-202ENST00000378593 POM121Q96HA1 1249 aa9.23□□□□□ -0.93
AFF4-202ENST00000378593 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
AFF4-202ENST00000378593 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
AFF4-202ENST00000378593 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
AFF4-202ENST00000378593 RFC5P40937 340 aa9.2□□□□□ -0.94
AFF4-202ENST00000378593 PRSS12P56730 875 aa9.2□□□□□ -0.94
AFF4-202ENST00000378593 TMEM259Q4ZIN3 620 aa9.2□□□□□ -0.94
AFF4-202ENST00000378593 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
AFF4-202ENST00000378593 COG6Q9Y2V7 657 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms