RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
RAB4B-202ENST00000378307 NPATQ14207 1427 aa23.84■■□□□ 1.41
RAB4B-202ENST00000378307 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
RAB4B-202ENST00000378307 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
RAB4B-202ENST00000378307 RNF17Q9BXT8 1623 aaKnown RBP23.83■■□□□ 1.41
RAB4B-202ENST00000378307 DUOX2Q9NRD8 1548 aa23.83■■□□□ 1.41
RAB4B-202ENST00000378307 WASHC2CQ9Y4E1 1318 aa23.82■■□□□ 1.4
RAB4B-202ENST00000378307 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
RAB4B-202ENST00000378307 KDM5DQ9BY66 1539 aa23.81■■□□□ 1.4
RAB4B-202ENST00000378307 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
RAB4B-202ENST00000378307 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
RAB4B-202ENST00000378307 FBXO31Q5XUX0 539 aaPredicted RBP23.8■■□□□ 1.4
RAB4B-202ENST00000378307 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
RAB4B-202ENST00000378307 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
RAB4B-202ENST00000378307 ABCC3O15438 1527 aa23.75■■□□□ 1.39
RAB4B-202ENST00000378307 MYO3AQ8NEV4 1616 aa23.75■■□□□ 1.39
RAB4B-202ENST00000378307 ANKRD30AQ9BXX3 1397 aa23.74■■□□□ 1.39
RAB4B-202ENST00000378307 ERBINQ96RT1 1412 aa23.74■■□□□ 1.39
RAB4B-202ENST00000378307 PZPP20742 1482 aa23.74■■□□□ 1.39
RAB4B-202ENST00000378307 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
RAB4B-202ENST00000378307 CEP152O94986 1710 aa23.73■■□□□ 1.39
RAB4B-202ENST00000378307 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
RAB4B-202ENST00000378307 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.38
RAB4B-202ENST00000378307 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
RAB4B-202ENST00000378307 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
RAB4B-202ENST00000378307 CAMSAP1Q5T5Y3 1602 aa23.69■■□□□ 1.38
RAB4B-202ENST00000378307 TNRQ92752 1358 aa23.68■■□□□ 1.38
RAB4B-202ENST00000378307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.38
RAB4B-202ENST00000378307 DEPDC5O75140 1603 aa23.68■■□□□ 1.38
RAB4B-202ENST00000378307 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
RAB4B-202ENST00000378307 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.38
RAB4B-202ENST00000378307 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
RAB4B-202ENST00000378307 NCKAP5LQ9HCH0 1330 aa23.63■■□□□ 1.37
RAB4B-202ENST00000378307 ITGAEP38570 1179 aa23.63■■□□□ 1.37
RAB4B-202ENST00000378307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.61■■□□□ 1.37
RAB4B-202ENST00000378307 ERVK-7P63135 1459 aa23.61■■□□□ 1.37
RAB4B-202ENST00000378307 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
RAB4B-202ENST00000378307 ANKRD50Q9ULJ7 1429 aa23.6■■□□□ 1.37
RAB4B-202ENST00000378307 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
RAB4B-202ENST00000378307 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
RAB4B-202ENST00000378307 PTPRTO14522 1441 aa23.59■■□□□ 1.37
RAB4B-202ENST00000378307 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
RAB4B-202ENST00000378307 ARHGAP31Q2M1Z3 1444 aa23.57■■□□□ 1.36
RAB4B-202ENST00000378307 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
RAB4B-202ENST00000378307 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
RAB4B-202ENST00000378307 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
RAB4B-202ENST00000378307 KANK1Q14678 1352 aa23.55■■□□□ 1.36
RAB4B-202ENST00000378307 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
RAB4B-202ENST00000378307 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
RAB4B-202ENST00000378307 PKD2Q13563 968 aa23.51■■□□□ 1.35
RAB4B-202ENST00000378307 CERKQ8TCT0 537 aa23.5■■□□□ 1.35
RAB4B-202ENST00000378307 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
RAB4B-202ENST00000378307 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
RAB4B-202ENST00000378307 UNC13BO14795 1591 aa23.48■■□□□ 1.35
RAB4B-202ENST00000378307 NEURL4Q96JN8 1562 aa23.47■■□□□ 1.35
RAB4B-202ENST00000378307 POLR1AO95602 1720 aaPredicted RBP23.46■■□□□ 1.35
RAB4B-202ENST00000378307 UBR1Q8IWV7 1749 aa23.46■■□□□ 1.35
RAB4B-202ENST00000378307 FBXO41Q8TF61 875 aa23.46■■□□□ 1.35
RAB4B-202ENST00000378307 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
RAB4B-202ENST00000378307 SYNMO15061 1565 aa23.44■■□□□ 1.34
RAB4B-202ENST00000378307 NOS1P29475 1434 aa23.42■■□□□ 1.34
RAB4B-202ENST00000378307 ZNF335Q9H4Z2 1342 aaPredicted RBP23.42■■□□□ 1.34
RAB4B-202ENST00000378307 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
RAB4B-202ENST00000378307 ANKLE2Q86XL3 938 aa23.42■■□□□ 1.34
RAB4B-202ENST00000378307 TET3O43151 1660 aa23.41■■□□□ 1.34
RAB4B-202ENST00000378307 IDI1Q13907 227 aa23.41■■□□□ 1.34
RAB4B-202ENST00000378307 GCC2Q8IWJ2 1684 aa23.38■■□□□ 1.33
RAB4B-202ENST00000378307 IQGAP3Q86VI3 1631 aa23.38■■□□□ 1.33
RAB4B-202ENST00000378307 NUP155O75694 1391 aa23.38■■□□□ 1.33
RAB4B-202ENST00000378307 NAIPQ13075 1403 aa23.37■■□□□ 1.33
RAB4B-202ENST00000378307 E9PCH4 1651 aa23.37■■□□□ 1.33
RAB4B-202ENST00000378307 MED14O60244 1454 aa23.36■■□□□ 1.33
RAB4B-202ENST00000378307 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
RAB4B-202ENST00000378307 LTKP29376 864 aa23.35■■□□□ 1.33
RAB4B-202ENST00000378307 ARHGAP23Q9P227 1491 aa23.35■■□□□ 1.33
RAB4B-202ENST00000378307 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
RAB4B-202ENST00000378307 SLIT1O75093 1534 aa23.33■■□□□ 1.33
RAB4B-202ENST00000378307 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
RAB4B-202ENST00000378307 SLC52A1Q9NWF4 448 aa23.31■■□□□ 1.32
RAB4B-202ENST00000378307 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
RAB4B-202ENST00000378307 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
RAB4B-202ENST00000378307 STAG3Q9UJ98 1225 aa23.3■■□□□ 1.32
RAB4B-202ENST00000378307 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
RAB4B-202ENST00000378307 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
RAB4B-202ENST00000378307 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
RAB4B-202ENST00000378307 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
RAB4B-202ENST00000378307 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
RAB4B-202ENST00000378307 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
RAB4B-202ENST00000378307 EID1Q9Y6B2 187 aa23.23■■□□□ 1.31
RAB4B-202ENST00000378307 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
RAB4B-202ENST00000378307 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
RAB4B-202ENST00000378307 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
RAB4B-202ENST00000378307 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
RAB4B-202ENST00000378307 SPHKAPQ2M3C7 1700 aa23.18■■□□□ 1.3
RAB4B-202ENST00000378307 ZFYVE9O95405 1425 aa23.17■■□□□ 1.3
RAB4B-202ENST00000378307 CPS1P31327 1500 aa23.17■■□□□ 1.3
RAB4B-202ENST00000378307 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
RAB4B-202ENST00000378307 RIMS2Q9UQ26 1411 aa23.15■■□□□ 1.3
RAB4B-202ENST00000378307 SLC26A8Q96RN1 970 aa23.14■■□□□ 1.29
RAB4B-202ENST00000378307 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms