RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
PCDHGA1-201ENST00000378105 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
PCDHGA1-201ENST00000378105 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
PCDHGA1-201ENST00000378105 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
PCDHGA1-201ENST00000378105 TROQ12816 1431 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA1-201ENST00000378105 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA1-201ENST00000378105 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
PCDHGA1-201ENST00000378105 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
PCDHGA1-201ENST00000378105 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
PCDHGA1-201ENST00000378105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCDHGA1-201ENST00000378105 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
PCDHGA1-201ENST00000378105 E9PCH4 1651 aa14.88□□□□□ -0.03
PCDHGA1-201ENST00000378105 ADAMTSL3P82987 1691 aa14.87□□□□□ -0.03
PCDHGA1-201ENST00000378105 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
PCDHGA1-201ENST00000378105 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 SYCP2Q9BX26 1530 aa14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 ZNF518AQ6AHZ1 1483 aa14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 PRDM15P57071 1507 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 ARHGEF40Q8TER5 1519 aa14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 IRX6P78412 446 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA1-201ENST00000378105 MROH2AA6NES4 1674 aa14.85□□□□□ -0.03
PCDHGA1-201ENST00000378105 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
PCDHGA1-201ENST00000378105 CEP152O94986 1710 aa14.84□□□□□ -0.03
PCDHGA1-201ENST00000378105 MYO5BQ9ULV0 1848 aa14.84□□□□□ -0.03
PCDHGA1-201ENST00000378105 HECW2Q9P2P5 1572 aa14.83□□□□□ -0.04
PCDHGA1-201ENST00000378105 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
PCDHGA1-201ENST00000378105 CFDP1Q9UEE9 299 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA1-201ENST00000378105 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA1-201ENST00000378105 ESF1Q9H501 851 aaKnown RBP14.82□□□□□ -0.04
PCDHGA1-201ENST00000378105 BRPF3Q9ULD4 1205 aa14.82□□□□□ -0.04
PCDHGA1-201ENST00000378105 C11orf95C9JLR9 678 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA1-201ENST00000378105 CHMP4BQ9H444 224 aaKnown RBP14.81□□□□□ -0.04
PCDHGA1-201ENST00000378105 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
PCDHGA1-201ENST00000378105 PLCH2O75038 1416 aa14.79□□□□□ -0.04
PCDHGA1-201ENST00000378105 PTPRGP23470 1445 aa14.79□□□□□ -0.04
PCDHGA1-201ENST00000378105 TAF7LQ5H9L4 462 aa14.79□□□□□ -0.04
PCDHGA1-201ENST00000378105 FGD6Q6ZV73 1430 aa14.77□□□□□ -0.04
PCDHGA1-201ENST00000378105 MYOM3Q5VTT5 1437 aa14.77□□□□□ -0.05
PCDHGA1-201ENST00000378105 CARMIL2Q6F5E8 1435 aa14.76□□□□□ -0.05
PCDHGA1-201ENST00000378105 AKNAQ7Z591 1439 aa14.76□□□□□ -0.05
PCDHGA1-201ENST00000378105 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
PCDHGA1-201ENST00000378105 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
PCDHGA1-201ENST00000378105 ABCC5O15440 1437 aa14.75□□□□□ -0.05
PCDHGA1-201ENST00000378105 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
PCDHGA1-201ENST00000378105 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
PCDHGA1-201ENST00000378105 MIA2Q96PC5 1412 aa14.74□□□□□ -0.05
PCDHGA1-201ENST00000378105 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA1-201ENST00000378105 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
PCDHGA1-201ENST00000378105 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA1-201ENST00000378105 CAMSAP1Q5T5Y3 1602 aa14.73□□□□□ -0.05
PCDHGA1-201ENST00000378105 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA1-201ENST00000378105 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
PCDHGA1-201ENST00000378105 C3P01024 1663 aa14.72□□□□□ -0.05
PCDHGA1-201ENST00000378105 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
PCDHGA1-201ENST00000378105 LMTK2Q8IWU2 1503 aa14.71□□□□□ -0.05
PCDHGA1-201ENST00000378105 SYNMO15061 1565 aa14.71□□□□□ -0.05
PCDHGA1-201ENST00000378105 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
PCDHGA1-201ENST00000378105 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.06
PCDHGA1-201ENST00000378105 SPHKAPQ2M3C7 1700 aa14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 NEO1Q92859 1461 aa14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 TONSLQ96HA7 1378 aa14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 NRXN3Q9Y4C0 1643 aa14.7□□□□□ -0.06
PCDHGA1-201ENST00000378105 POGZQ7Z3K3 1410 aa14.69□□□□□ -0.06
PCDHGA1-201ENST00000378105 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
PCDHGA1-201ENST00000378105 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA1-201ENST00000378105 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 PREX1Q8TCU6 1659 aa14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 PZPP20742 1482 aa14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 MLH3Q9UHC1 1453 aa14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 DAPK1P53355 1430 aa14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 NAP1L2Q9ULW6 460 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA1-201ENST00000378105 NAP1L5Q96NT1 182 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA1-201ENST00000378105 TET3O43151 1660 aa14.66□□□□□ -0.06
PCDHGA1-201ENST00000378105 AGLP35573 1532 aa14.66□□□□□ -0.06
PCDHGA1-201ENST00000378105 BBXQ8WY36 941 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA1-201ENST00000378105 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
PCDHGA1-201ENST00000378105 CYB5RLQ6IPT4 315 aa14.65□□□□□ -0.06
PCDHGA1-201ENST00000378105 PPLO60437 1756 aa14.64□□□□□ -0.07
PCDHGA1-201ENST00000378105 RGL3Q3MIN7 710 aa14.64□□□□□ -0.07
PCDHGA1-201ENST00000378105 NAIPQ13075 1403 aa14.63□□□□□ -0.07
PCDHGA1-201ENST00000378105 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
PCDHGA1-201ENST00000378105 FANCIQ9NVI1 1328 aa14.63□□□□□ -0.07
PCDHGA1-201ENST00000378105 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
PCDHGA1-201ENST00000378105 NOP58Q9Y2X3 529 aaKnown RBP14.62□□□□□ -0.07
PCDHGA1-201ENST00000378105 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
PCDHGA1-201ENST00000378105 HSP90AA2PQ14568 343 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA1-201ENST00000378105 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
PCDHGA1-201ENST00000378105 RGS3P49796 1198 aa14.61□□□□□ -0.07
PCDHGA1-201ENST00000378105 CLTCQ00610 1675 aaKnown RBP14.6□□□□□ -0.07
PCDHGA1-201ENST00000378105 PLA2R1Q13018 1463 aa14.6□□□□□ -0.07
PCDHGA1-201ENST00000378105 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA1-201ENST00000378105 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
PCDHGA1-201ENST00000378105 UBR1Q8IWV7 1749 aa14.58□□□□□ -0.07
PCDHGA1-201ENST00000378105 HFM1A2PYH4 1435 aa14.58□□□□□ -0.08
PCDHGA1-201ENST00000378105 CLTCL1P53675 1640 aa14.58□□□□□ -0.08
PCDHGA1-201ENST00000378105 FANCAO15360 1455 aa14.58□□□□□ -0.08
PCDHGA1-201ENST00000378105 MADDQ8WXG6 1647 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms