RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
CKAP2-202ENST00000378034 PTPRMP28827 1452 aa20.09■□□□□ 0.81
CKAP2-202ENST00000378034 FAM135AQ9P2D6 1515 aa20.09■□□□□ 0.81
CKAP2-202ENST00000378034 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
CKAP2-202ENST00000378034 MROH2AA6NES4 1674 aa20.05■□□□□ 0.8
CKAP2-202ENST00000378034 ANKRD50Q9ULJ7 1429 aa20.05■□□□□ 0.8
CKAP2-202ENST00000378034 DEPDC5O75140 1603 aa20.02■□□□□ 0.8
CKAP2-202ENST00000378034 CLTCQ00610 1675 aaKnown RBP20.02■□□□□ 0.8
CKAP2-202ENST00000378034 KDM5DQ9BY66 1539 aa20.01■□□□□ 0.79
CKAP2-202ENST00000378034 MROH1Q8NDA8 1641 aa20.01■□□□□ 0.79
CKAP2-202ENST00000378034 ZC3H13Q5T200 1668 aaKnown RBP20.01■□□□□ 0.79
CKAP2-202ENST00000378034 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
CKAP2-202ENST00000378034 WASHC2CQ9Y4E1 1318 aa19.99■□□□□ 0.79
CKAP2-202ENST00000378034 C3P01024 1663 aa19.99■□□□□ 0.79
CKAP2-202ENST00000378034 ZMYM3Q14202 1370 aa19.98■□□□□ 0.79
CKAP2-202ENST00000378034 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
CKAP2-202ENST00000378034 KANK1Q14678 1352 aa19.97■□□□□ 0.79
CKAP2-202ENST00000378034 HFM1A2PYH4 1435 aa19.97■□□□□ 0.79
CKAP2-202ENST00000378034 NAIPQ13075 1403 aa19.96■□□□□ 0.79
CKAP2-202ENST00000378034 ABCC3O15438 1527 aa19.96■□□□□ 0.79
CKAP2-202ENST00000378034 UNC13BO14795 1591 aa19.94■□□□□ 0.78
CKAP2-202ENST00000378034 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
CKAP2-202ENST00000378034 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
CKAP2-202ENST00000378034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.781e-7■■■■■ 30.8
CKAP2-202ENST00000378034 CEP152O94986 1710 aa19.92■□□□□ 0.78
CKAP2-202ENST00000378034 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
CKAP2-202ENST00000378034 NPATQ14207 1427 aa19.92■□□□□ 0.78
CKAP2-202ENST00000378034 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
CKAP2-202ENST00000378034 CAMSAP1Q5T5Y3 1602 aa19.9■□□□□ 0.78
CKAP2-202ENST00000378034 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
CKAP2-202ENST00000378034 PZPP20742 1482 aa19.9■□□□□ 0.78
CKAP2-202ENST00000378034 ARHGAP31Q2M1Z3 1444 aa19.88■□□□□ 0.77
CKAP2-202ENST00000378034 IQGAP3Q86VI3 1631 aa19.86■□□□□ 0.77
CKAP2-202ENST00000378034 PREX1Q8TCU6 1659 aa19.86■□□□□ 0.77
CKAP2-202ENST00000378034 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
CKAP2-202ENST00000378034 NUP155O75694 1391 aa19.84■□□□□ 0.77
CKAP2-202ENST00000378034 TET3O43151 1660 aa19.84■□□□□ 0.77
CKAP2-202ENST00000378034 EFCAB6Q5THR3 1501 aa19.84■□□□□ 0.77
CKAP2-202ENST00000378034 SETD5Q9C0A6 1442 aa19.82■□□□□ 0.76
CKAP2-202ENST00000378034 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
CKAP2-202ENST00000378034 SPATA31D1Q6ZQQ2 1576 aa19.81■□□□□ 0.76
CKAP2-202ENST00000378034 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
CKAP2-202ENST00000378034 FBXO31Q5XUX0 539 aaPredicted RBP19.8■□□□□ 0.76
CKAP2-202ENST00000378034 ERVK-7P63135 1459 aa19.8■□□□□ 0.76
CKAP2-202ENST00000378034 TNRQ92752 1358 aa19.8■□□□□ 0.76
CKAP2-202ENST00000378034 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
CKAP2-202ENST00000378034 MYO3AQ8NEV4 1616 aa19.77■□□□□ 0.76
CKAP2-202ENST00000378034 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
CKAP2-202ENST00000378034 CFAP65Q6ZU64 1925 aaKnown RBP19.76■□□□□ 0.75
CKAP2-202ENST00000378034 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
CKAP2-202ENST00000378034 NLRP1Q9C000 1473 aa19.75■□□□□ 0.75
CKAP2-202ENST00000378034 E9PCH4 1651 aa19.74■□□□□ 0.75
CKAP2-202ENST00000378034 HRCP23327 699 aa19.74■□□□□ 0.75
CKAP2-202ENST00000378034 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
CKAP2-202ENST00000378034 NOS1P29475 1434 aa19.73■□□□□ 0.75
CKAP2-202ENST00000378034 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
CKAP2-202ENST00000378034 CEP170BQ9Y4F5 1589 aaPredicted RBP19.73■□□□□ 0.75
CKAP2-202ENST00000378034 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
CKAP2-202ENST00000378034 SYNMO15061 1565 aa19.69■□□□□ 0.74
CKAP2-202ENST00000378034 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
CKAP2-202ENST00000378034 SLC52A1Q9NWF4 448 aa19.68■□□□□ 0.74
CKAP2-202ENST00000378034 HSPA2P54652 639 aa19.66■□□□□ 0.74
CKAP2-202ENST00000378034 PKD2Q13563 968 aa19.65■□□□□ 0.74
CKAP2-202ENST00000378034 UGGT1Q9NYU2 1555 aa19.65■□□□□ 0.74
CKAP2-202ENST00000378034 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
CKAP2-202ENST00000378034 PTPRTO14522 1441 aa19.64■□□□□ 0.74
CKAP2-202ENST00000378034 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.74
CKAP2-202ENST00000378034 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.74
CKAP2-202ENST00000378034 THEMISQ8N1K5 641 aaPredicted RBP19.64■□□□□ 0.73
CKAP2-202ENST00000378034 PIK3C2BO00750 1634 aa19.63■□□□□ 0.73
CKAP2-202ENST00000378034 PLA2R1Q13018 1463 aa19.63■□□□□ 0.73
CKAP2-202ENST00000378034 IDI1Q13907 227 aa19.63■□□□□ 0.73
CKAP2-202ENST00000378034 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
CKAP2-202ENST00000378034 TRPM2O94759 1503 aa19.6■□□□□ 0.73
CKAP2-202ENST00000378034 ADGRB3O60242 1522 aa19.58■□□□□ 0.73
CKAP2-202ENST00000378034 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.73
CKAP2-202ENST00000378034 STRCQ7RTU9 1775 aa19.57■□□□□ 0.72
CKAP2-202ENST00000378034 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
CKAP2-202ENST00000378034 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
CKAP2-202ENST00000378034 SLIT1O75093 1534 aa19.54■□□□□ 0.72
CKAP2-202ENST00000378034 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
CKAP2-202ENST00000378034 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
CKAP2-202ENST00000378034 ANKLE2Q86XL3 938 aa19.53■□□□□ 0.72
CKAP2-202ENST00000378034 CLTCL1P53675 1640 aa19.53■□□□□ 0.72
CKAP2-202ENST00000378034 FOXD1Q16676 465 aa19.52■□□□□ 0.72
CKAP2-202ENST00000378034 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.71
CKAP2-202ENST00000378034 KIF1BO60333 1816 aa19.5■□□□□ 0.71
CKAP2-202ENST00000378034 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
CKAP2-202ENST00000378034 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
CKAP2-202ENST00000378034 EID1Q9Y6B2 187 aa19.49■□□□□ 0.71
CKAP2-202ENST00000378034 CHGAP10645 457 aaKnown RBP19.48■□□□□ 0.71
CKAP2-202ENST00000378034 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
CKAP2-202ENST00000378034 MED14O60244 1454 aa19.48■□□□□ 0.71
CKAP2-202ENST00000378034 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
CKAP2-202ENST00000378034 SCAF11Q99590 1463 aaKnown RBP19.48■□□□□ 0.71
CKAP2-202ENST00000378034 NEURL4Q96JN8 1562 aa19.47■□□□□ 0.71
CKAP2-202ENST00000378034 TXNDC2Q86VQ3 553 aa19.46■□□□□ 0.71
CKAP2-202ENST00000378034 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
CKAP2-202ENST00000378034 ZFYVE9O95405 1425 aa19.45■□□□□ 0.7
CKAP2-202ENST00000378034 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms