RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 KIF3BO15066 747 aa30.75■■■□□ 2.51
RNF38-205ENST00000377877 UNC13BO14795 1591 aa30.75■■■□□ 2.51
RNF38-205ENST00000377877 KDM5DQ9BY66 1539 aa30.75■■■□□ 2.51
RNF38-205ENST00000377877 NEUROD1Q13562 356 aa30.75■■■□□ 2.51
RNF38-205ENST00000377877 PKD2Q13563 968 aa30.74■■■□□ 2.51
RNF38-205ENST00000377877 ZMYM4Q5VZL5 1548 aa30.73■■■□□ 2.51
RNF38-205ENST00000377877 DIP2CQ9Y2E4 1556 aa30.72■■■□□ 2.51
RNF38-205ENST00000377877 FAM135AQ9P2D6 1515 aa30.69■■■□□ 2.5
RNF38-205ENST00000377877 MAGI2Q86UL8 1455 aa30.69■■■□□ 2.5
RNF38-205ENST00000377877 ANKRD30BQ9BXX2 1392 aa30.66■■■□□ 2.5
RNF38-205ENST00000377877 EIF2AK4Q9P2K8 1649 aaKnown RBP30.65■■■□□ 2.5
RNF38-205ENST00000377877 DEPDC5O75140 1603 aa30.63■■■□□ 2.49
RNF38-205ENST00000377877 IQGAP3Q86VI3 1631 aa30.63■■■□□ 2.49
RNF38-205ENST00000377877 MROH1Q8NDA8 1641 aa30.6■■■□□ 2.49
RNF38-205ENST00000377877 ATP10AO60312 1499 aa30.59■■■□□ 2.49
RNF38-205ENST00000377877 GGT6Q6P531 493 aa30.59■■■□□ 2.49
RNF38-205ENST00000377877 VWDEQ8N2E2 1590 aa30.55■■■□□ 2.48
RNF38-205ENST00000377877 KANK1Q14678 1352 aa30.54■■■□□ 2.48
RNF38-205ENST00000377877 BCORL1Q5H9F3 1711 aa30.53■■■□□ 2.48
RNF38-205ENST00000377877 RNF17Q9BXT8 1623 aaKnown RBP30.53■■■□□ 2.48
RNF38-205ENST00000377877 PRDM15P57071 1507 aaPredicted RBP30.53■■■□□ 2.48
RNF38-205ENST00000377877 SIGLEC1Q9BZZ2 1709 aa30.47■■■□□ 2.47
RNF38-205ENST00000377877 TIMELESSQ9UNS1 1208 aa30.47■■■□□ 2.47
RNF38-205ENST00000377877 ARHGEF40Q8TER5 1519 aa30.47■■■□□ 2.47
RNF38-205ENST00000377877 PLA2R1Q13018 1463 aa30.46■■■□□ 2.47
RNF38-205ENST00000377877 REREQ9P2R6 1566 aa30.45■■■□□ 2.47
RNF38-205ENST00000377877 E9PCH4 1651 aa30.44■■■□□ 2.46
RNF38-205ENST00000377877 RPRD2Q5VT52 1461 aaKnown RBP30.44■■■□□ 2.46
RNF38-205ENST00000377877 TONSLQ96HA7 1378 aa30.44■■■□□ 2.46
RNF38-205ENST00000377877 TET3O43151 1660 aa30.43■■■□□ 2.46
RNF38-205ENST00000377877 CEP152O94986 1710 aa30.42■■■□□ 2.46
RNF38-205ENST00000377877 WASHC2CQ9Y4E1 1318 aa30.42■■■□□ 2.46
RNF38-205ENST00000377877 AGLP35573 1532 aa30.4■■■□□ 2.46
RNF38-205ENST00000377877 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
RNF38-205ENST00000377877 LMTK2Q8IWU2 1503 aa30.39■■■□□ 2.46
RNF38-205ENST00000377877 L3MBTL2Q969R5 705 aa30.37■■■□□ 2.45
RNF38-205ENST00000377877 ABCC3O15438 1527 aa30.37■■■□□ 2.45
RNF38-205ENST00000377877 MLECQ14165 292 aa30.35■■■□□ 2.45
RNF38-205ENST00000377877 EFCAB6Q5THR3 1501 aa30.33■■■□□ 2.45
RNF38-205ENST00000377877 PTPRTO14522 1441 aa30.31■■■□□ 2.44
RNF38-205ENST00000377877 CFAP65Q6ZU64 1925 aaKnown RBP30.31■■■□□ 2.44
RNF38-205ENST00000377877 CCDC144AA2RUR9 1427 aa30.3■■■□□ 2.44
RNF38-205ENST00000377877 ARID4BQ4LE39 1312 aaPredicted RBP30.29■■■□□ 2.44
RNF38-205ENST00000377877 NPATQ14207 1427 aa30.28■■■□□ 2.44
RNF38-205ENST00000377877 SPHKAPQ2M3C7 1700 aa30.27■■■□□ 2.44
RNF38-205ENST00000377877 CAMSAP1Q5T5Y3 1602 aa30.26■■■□□ 2.43
RNF38-205ENST00000377877 PPP6R1Q9UPN7 881 aa30.24■■■□□ 2.43
RNF38-205ENST00000377877 TRPM2O94759 1503 aa30.23■■■□□ 2.43
RNF38-205ENST00000377877 ZC3H13Q5T200 1668 aaKnown RBP30.22■■■□□ 2.43
RNF38-205ENST00000377877 RGL3Q3MIN7 710 aa30.2■■■□□ 2.43
RNF38-205ENST00000377877 ARHGAP31Q2M1Z3 1444 aa30.19■■■□□ 2.42
RNF38-205ENST00000377877 CLTCL1P53675 1640 aa30.18■■■□□ 2.42
RNF38-205ENST00000377877 UGGT1Q9NYU2 1555 aa30.18■■■□□ 2.42
RNF38-205ENST00000377877 CLTCQ00610 1675 aaKnown RBP30.17■■■□□ 2.42
RNF38-205ENST00000377877 NBPF8Q3BBV2 869 aa30.15■■■□□ 2.42
RNF38-205ENST00000377877 FBXO31Q5XUX0 539 aaPredicted RBP30.15■■■□□ 2.42
RNF38-205ENST00000377877 DCAF11Q8TEB1 546 aa30.13■■■□□ 2.41
RNF38-205ENST00000377877 KDM2AQ9Y2K7 1162 aa30.13■■■□□ 2.41
RNF38-205ENST00000377877 NOS1P29475 1434 aa30.13■■■□□ 2.41
RNF38-205ENST00000377877 SPATA31E1Q6ZUB1 1445 aa30.12■■■□□ 2.41
RNF38-205ENST00000377877 ESF1Q9H501 851 aaKnown RBP30.1■■■□□ 2.41
RNF38-205ENST00000377877 CNTLNQ9NXG0 1405 aa30.09■■■□□ 2.41
RNF38-205ENST00000377877 SYNMO15061 1565 aa30.07■■■□□ 2.4
RNF38-205ENST00000377877 ZMYM3Q14202 1370 aa30.06■■■□□ 2.4
RNF38-205ENST00000377877 ZNF326Q5BKZ1 582 aaKnown RBP30.06■■■□□ 2.4
RNF38-205ENST00000377877 PREX1Q8TCU6 1659 aa30.05■■■□□ 2.4
RNF38-205ENST00000377877 ZNF316A6NFI3 1004 aaPredicted RBP30.04■■■□□ 2.4
RNF38-205ENST00000377877 IDI1Q13907 227 aa30.03■■■□□ 2.4
RNF38-205ENST00000377877 KIF1BO60333 1816 aa30.01■■■□□ 2.39
RNF38-205ENST00000377877 CHGAP10645 457 aaKnown RBP30.01■■■□□ 2.39
RNF38-205ENST00000377877 ERVK-7P63135 1459 aa30■■■□□ 2.39
RNF38-205ENST00000377877 UHRF1BP1Q6BDS2 1440 aa29.98■■■□□ 2.39
RNF38-205ENST00000377877 PIK3C2BO00750 1634 aa29.98■■■□□ 2.39
RNF38-205ENST00000377877 SLC52A1Q9NWF4 448 aa29.97■■■□□ 2.39
RNF38-205ENST00000377877 MROH2AA6NES4 1674 aa29.96■■■□□ 2.39
RNF38-205ENST00000377877 CEBPAP49715 358 aaPredicted RBP29.95■■■□□ 2.38
RNF38-205ENST00000377877 NEURL4Q96JN8 1562 aa29.93■■■□□ 2.38
RNF38-205ENST00000377877 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
RNF38-205ENST00000377877 SPATA31D1Q6ZQQ2 1576 aa29.92■■■□□ 2.38
RNF38-205ENST00000377877 ADGRB3O60242 1522 aa29.92■■■□□ 2.38
RNF38-205ENST00000377877 PRAG1Q86YV5 1406 aa29.91■■■□□ 2.38
RNF38-205ENST00000377877 FER1L4A9Z1Z3 1794 aa29.9■■■□□ 2.38
RNF38-205ENST00000377877 PLPPR3Q6T4P5 718 aa29.86■■■□□ 2.37
RNF38-205ENST00000377877 NBPF1Q3BBV0 1214 aa29.83■■■□□ 2.37
RNF38-205ENST00000377877 STAC3Q96MF2 364 aa29.83■■■□□ 2.37
RNF38-205ENST00000377877 MYO5BQ9ULV0 1848 aa29.83■■■□□ 2.37
RNF38-205ENST00000377877 C3P01024 1663 aa29.83■■■□□ 2.37
RNF38-205ENST00000377877 ADGRF5Q8IZF2 1346 aa29.82■■■□□ 2.36
RNF38-205ENST00000377877 RALGAPBQ86X10 1494 aa29.82■■■□□ 2.36
RNF38-205ENST00000377877 TMEM131LA2VDJ0 1609 aa29.82■■■□□ 2.36
RNF38-205ENST00000377877 MADDQ8WXG6 1647 aa29.81■■■□□ 2.36
RNF38-205ENST00000377877 IFT172Q9UG01 1749 aa29.81■■■□□ 2.36
RNF38-205ENST00000377877 HSPA5P11021 654 aaKnown RBP29.81■■■□□ 2.36
RNF38-205ENST00000377877 TNRQ92752 1358 aa29.81■■■□□ 2.36
RNF38-205ENST00000377877 RPGRIP1LQ68CZ1 1315 aa29.79■■■□□ 2.36
RNF38-205ENST00000377877 NUTM2DQ5VT03 806 aaPredicted RBP29.79■■■□□ 2.36
RNF38-205ENST00000377877 TRPM1Q7Z4N2 1603 aa29.79■■■□□ 2.36
RNF38-205ENST00000377877 EIF4G2P78344 907 aaKnown RBP eCLIP29.79■■■□□ 2.36
RNF38-205ENST00000377877 ADAMTSL3P82987 1691 aa29.78■■■□□ 2.36
RNF38-205ENST00000377877 STAG3Q9UJ98 1225 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms