RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
SMARCE1-203ENST00000377808 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
SMARCE1-203ENST00000377808 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
SMARCE1-203ENST00000377808 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
SMARCE1-203ENST00000377808 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
SMARCE1-203ENST00000377808 NPATQ14207 1427 aa17.83■□□□□ 0.44
SMARCE1-203ENST00000377808 EIF2AK4Q9P2K8 1649 aaKnown RBP17.81■□□□□ 0.44
SMARCE1-203ENST00000377808 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
SMARCE1-203ENST00000377808 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
SMARCE1-203ENST00000377808 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
SMARCE1-203ENST00000377808 FAM135AQ9P2D6 1515 aa17.79■□□□□ 0.44
SMARCE1-203ENST00000377808 MYO3AQ8NEV4 1616 aa17.78■□□□□ 0.44
SMARCE1-203ENST00000377808 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
SMARCE1-203ENST00000377808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.442e-15■■■□□ 14.9
SMARCE1-203ENST00000377808 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
SMARCE1-203ENST00000377808 PZPP20742 1482 aa17.76■□□□□ 0.43
SMARCE1-203ENST00000377808 ABCC3O15438 1527 aa17.76■□□□□ 0.43
SMARCE1-203ENST00000377808 ZC3H13Q5T200 1668 aaKnown RBP17.75■□□□□ 0.43
SMARCE1-203ENST00000377808 TNRQ92752 1358 aa17.75■□□□□ 0.43
SMARCE1-203ENST00000377808 ITGAEP38570 1179 aa17.74■□□□□ 0.43
SMARCE1-203ENST00000377808 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
SMARCE1-203ENST00000377808 CAMSAP1Q5T5Y3 1602 aa17.74■□□□□ 0.43
SMARCE1-203ENST00000377808 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
SMARCE1-203ENST00000377808 CEP152O94986 1710 aa17.73■□□□□ 0.43
SMARCE1-203ENST00000377808 NCOA1Q15788 1441 aa17.73■□□□□ 0.43
SMARCE1-203ENST00000377808 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
SMARCE1-203ENST00000377808 STRCQ7RTU9 1775 aa17.72■□□□□ 0.43
SMARCE1-203ENST00000377808 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
SMARCE1-203ENST00000377808 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.43
SMARCE1-203ENST00000377808 KANK1Q14678 1352 aa17.7■□□□□ 0.42
SMARCE1-203ENST00000377808 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-203ENST00000377808 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
SMARCE1-203ENST00000377808 ILDR1Q86SU0 546 aaPredicted RBP17.69■□□□□ 0.42
SMARCE1-203ENST00000377808 NCKAP5LQ9HCH0 1330 aa17.68■□□□□ 0.42
SMARCE1-203ENST00000377808 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
SMARCE1-203ENST00000377808 DEPDC5O75140 1603 aa17.66■□□□□ 0.42
SMARCE1-203ENST00000377808 ERVK-7P63135 1459 aa17.65■□□□□ 0.42
SMARCE1-203ENST00000377808 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
SMARCE1-203ENST00000377808 PTPRTO14522 1441 aa17.64■□□□□ 0.41
SMARCE1-203ENST00000377808 SPATA31D1Q6ZQQ2 1576 aa17.64■□□□□ 0.41
SMARCE1-203ENST00000377808 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
SMARCE1-203ENST00000377808 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
SMARCE1-203ENST00000377808 UGGT1Q9NYU2 1555 aa17.62■□□□□ 0.41
SMARCE1-203ENST00000377808 PKD2Q13563 968 aa17.62■□□□□ 0.41
SMARCE1-203ENST00000377808 ROCK1Q13464 1354 aa17.61■□□□□ 0.41
SMARCE1-203ENST00000377808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMARCE1-203ENST00000377808 ARHGAP31Q2M1Z3 1444 aa17.6■□□□□ 0.41
SMARCE1-203ENST00000377808 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
SMARCE1-203ENST00000377808 CERKQ8TCT0 537 aa17.59■□□□□ 0.41
SMARCE1-203ENST00000377808 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
SMARCE1-203ENST00000377808 LMTK2Q8IWU2 1503 aa17.58■□□□□ 0.4
SMARCE1-203ENST00000377808 VWDEQ8N2E2 1590 aa17.57■□□□□ 0.4
SMARCE1-203ENST00000377808 FBXO41Q8TF61 875 aa17.57■□□□□ 0.4
SMARCE1-203ENST00000377808 EFCAB6Q5THR3 1501 aa17.56■□□□□ 0.4
SMARCE1-203ENST00000377808 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
SMARCE1-203ENST00000377808 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
SMARCE1-203ENST00000377808 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
SMARCE1-203ENST00000377808 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
SMARCE1-203ENST00000377808 UNC13BO14795 1591 aa17.53■□□□□ 0.4
SMARCE1-203ENST00000377808 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
SMARCE1-203ENST00000377808 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
SMARCE1-203ENST00000377808 UBR1Q8IWV7 1749 aa17.51■□□□□ 0.39
SMARCE1-203ENST00000377808 NUP155O75694 1391 aa17.51■□□□□ 0.39
SMARCE1-203ENST00000377808 TET3O43151 1660 aa17.51■□□□□ 0.39
SMARCE1-203ENST00000377808 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
SMARCE1-203ENST00000377808 SYNMO15061 1565 aa17.49■□□□□ 0.39
SMARCE1-203ENST00000377808 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
SMARCE1-203ENST00000377808 LTBP4Q8N2S1 1624 aa17.48■□□□□ 0.39
SMARCE1-203ENST00000377808 GCC2Q8IWJ2 1684 aa17.48■□□□□ 0.39
SMARCE1-203ENST00000377808 RPRD2Q5VT52 1461 aaKnown RBP17.48■□□□□ 0.39
SMARCE1-203ENST00000377808 IDI1Q13907 227 aa17.47■□□□□ 0.39
SMARCE1-203ENST00000377808 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
SMARCE1-203ENST00000377808 NOS1P29475 1434 aa17.47■□□□□ 0.39
SMARCE1-203ENST00000377808 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.38
SMARCE1-203ENST00000377808 EID1Q9Y6B2 187 aa17.46■□□□□ 0.38
SMARCE1-203ENST00000377808 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
SMARCE1-203ENST00000377808 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
SMARCE1-203ENST00000377808 SLC52A1Q9NWF4 448 aa17.45■□□□□ 0.38
SMARCE1-203ENST00000377808 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
SMARCE1-203ENST00000377808 NAIPQ13075 1403 aa17.43■□□□□ 0.38
SMARCE1-203ENST00000377808 MED14O60244 1454 aa17.43■□□□□ 0.38
SMARCE1-203ENST00000377808 ADGRB3O60242 1522 aa17.43■□□□□ 0.38
SMARCE1-203ENST00000377808 E9PCH4 1651 aa17.43■□□□□ 0.38
SMARCE1-203ENST00000377808 SLIT1O75093 1534 aa17.42■□□□□ 0.38
SMARCE1-203ENST00000377808 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
SMARCE1-203ENST00000377808 LTKP29376 864 aa17.42■□□□□ 0.38
SMARCE1-203ENST00000377808 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
SMARCE1-203ENST00000377808 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
SMARCE1-203ENST00000377808 HFM1A2PYH4 1435 aa17.4■□□□□ 0.38
SMARCE1-203ENST00000377808 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-203ENST00000377808 BCANQ96GW7 911 aa17.39■□□□□ 0.37
SMARCE1-203ENST00000377808 IQSEC2Q5JU85 1478 aa17.38■□□□□ 0.37
SMARCE1-203ENST00000377808 CPS1P31327 1500 aa17.37■□□□□ 0.37
SMARCE1-203ENST00000377808 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
SMARCE1-203ENST00000377808 UBAP1LF5GYI3 381 aa17.35■□□□□ 0.37
SMARCE1-203ENST00000377808 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
SMARCE1-203ENST00000377808 TMEM131LA2VDJ0 1609 aa17.33■□□□□ 0.36
SMARCE1-203ENST00000377808 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.36
SMARCE1-203ENST00000377808 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
SMARCE1-203ENST00000377808 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms