RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
CRNKL1-202ENST00000377340 HECW1Q76N89 1606 aa11.14□□□□□ -0.63
CRNKL1-202ENST00000377340 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
CRNKL1-202ENST00000377340 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
CRNKL1-202ENST00000377340 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
CRNKL1-202ENST00000377340 WDR62O43379 1518 aa11.12□□□□□ -0.63
CRNKL1-202ENST00000377340 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
CRNKL1-202ENST00000377340 PANK3Q9H999 370 aa11.12□□□□□ -0.63
CRNKL1-202ENST00000377340 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
CRNKL1-202ENST00000377340 EVA1CP58658 441 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 ATP10BO94823 1461 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 FANCAO15360 1455 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
CRNKL1-202ENST00000377340 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 RTF1Q92541 710 aaKnown RBP11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 ESCO1Q5FWF5 840 aa11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 EHBP1L1Q8N3D4 1523 aa11.1□□□□□ -0.63
CRNKL1-202ENST00000377340 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-202ENST00000377340 CENPJQ9HC77 1338 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-202ENST00000377340 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
CRNKL1-202ENST00000377340 DENND4BO75064 1496 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-202ENST00000377340 PRAM1Q96QH2 718 aa11.08□□□□□ -0.63
CRNKL1-202ENST00000377340 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-202ENST00000377340 IDI1Q13907 227 aa11.08□□□□□ -0.64
CRNKL1-202ENST00000377340 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
CRNKL1-202ENST00000377340 HSPA2P54652 639 aa11.08□□□□□ -0.64
CRNKL1-202ENST00000377340 COG3Q96JB2 828 aa11.07□□□□□ -0.64
CRNKL1-202ENST00000377340 DAPK1P53355 1430 aa11.07□□□□□ -0.64
CRNKL1-202ENST00000377340 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
CRNKL1-202ENST00000377340 AKNAQ7Z591 1439 aa11.07□□□□□ -0.64
CRNKL1-202ENST00000377340 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 USP47Q96K76 1375 aa11.06□□□□□ -0.64
CRNKL1-202ENST00000377340 NLRP6P59044 892 aa11.05□□□□□ -0.64
CRNKL1-202ENST00000377340 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
CRNKL1-202ENST00000377340 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
CRNKL1-202ENST00000377340 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
CRNKL1-202ENST00000377340 CCDC141Q6ZP82 1450 aa11.04□□□□□ -0.64
CRNKL1-202ENST00000377340 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
CRNKL1-202ENST00000377340 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
CRNKL1-202ENST00000377340 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
CRNKL1-202ENST00000377340 ADAMTS12P58397 1594 aa11.03□□□□□ -0.64
CRNKL1-202ENST00000377340 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
CRNKL1-202ENST00000377340 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
CRNKL1-202ENST00000377340 NUP160Q12769 1436 aa11.02□□□□□ -0.64
CRNKL1-202ENST00000377340 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.64
CRNKL1-202ENST00000377340 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-202ENST00000377340 ABTB2Q8N961 1025 aa11.02□□□□□ -0.65
CRNKL1-202ENST00000377340 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-202ENST00000377340 CAMSAP2Q08AD1 1489 aa11.02□□□□□ -0.65
CRNKL1-202ENST00000377340 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
CRNKL1-202ENST00000377340 ABCC5O15440 1437 aa11.01□□□□□ -0.65
CRNKL1-202ENST00000377340 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
CRNKL1-202ENST00000377340 CGNL1Q0VF96 1302 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
CRNKL1-202ENST00000377340 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 SLC12A5Q9H2X9 1139 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
CRNKL1-202ENST00000377340 KIF14Q15058 1648 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
CRNKL1-202ENST00000377340 GPATCH8Q9UKJ3 1502 aaKnown RBP10.99□□□□□ -0.65
CRNKL1-202ENST00000377340 PLCH2O75038 1416 aa10.99□□□□□ -0.65
CRNKL1-202ENST00000377340 STRN4Q9NRL3 753 aa10.99□□□□□ -0.65
CRNKL1-202ENST00000377340 RALBP1Q15311 655 aa10.98□□□□□ -0.65
CRNKL1-202ENST00000377340 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
CRNKL1-202ENST00000377340 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
CRNKL1-202ENST00000377340 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
CRNKL1-202ENST00000377340 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
CRNKL1-202ENST00000377340 KIAA1107Q9UPP5 1409 aa10.97□□□□□ -0.65
CRNKL1-202ENST00000377340 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
CRNKL1-202ENST00000377340 NAIPQ13075 1403 aa10.97□□□□□ -0.65
CRNKL1-202ENST00000377340 CDK19Q9BWU1 502 aa10.97□□□□□ -0.65
CRNKL1-202ENST00000377340 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
CRNKL1-202ENST00000377340 TRAPPC8Q9Y2L5 1435 aa10.96□□□□□ -0.65
CRNKL1-202ENST00000377340 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
CRNKL1-202ENST00000377340 AMOTL2Q9Y2J4 779 aa10.96□□□□□ -0.65
CRNKL1-202ENST00000377340 DHX29Q7Z478 1369 aaKnown RBP10.96□□□□□ -0.65
CRNKL1-202ENST00000377340 FOXO3O43524 673 aa10.96□□□□□ -0.65
CRNKL1-202ENST00000377340 ABCC2Q92887 1545 aa10.96□□□□□ -0.66
CRNKL1-202ENST00000377340 MSH5O43196 834 aa10.96□□□□□ -0.66
CRNKL1-202ENST00000377340 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
CRNKL1-202ENST00000377340 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
CRNKL1-202ENST00000377340 GPRASP1Q5JY77 1395 aa10.95□□□□□ -0.66
CRNKL1-202ENST00000377340 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
CRNKL1-202ENST00000377340 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
CRNKL1-202ENST00000377340 HMOX1P09601 288 aa10.94□□□□□ -0.66
CRNKL1-202ENST00000377340 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-202ENST00000377340 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
CRNKL1-202ENST00000377340 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
CRNKL1-202ENST00000377340 ZC3H6P61129 1189 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-202ENST00000377340 ADGRF5Q8IZF2 1346 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms