RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
UBD-203ENST00000377050 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.18
UBD-203ENST00000377050 KIDINS220Q9ULH0 1771 aa16.21■□□□□ 0.18
UBD-203ENST00000377050 ABCC1P33527 1531 aa16.2■□□□□ 0.18
UBD-203ENST00000377050 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
UBD-203ENST00000377050 POLR1AO95602 1720 aaPredicted RBP16.19■□□□□ 0.18
UBD-203ENST00000377050 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
UBD-203ENST00000377050 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
UBD-203ENST00000377050 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
UBD-203ENST00000377050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
UBD-203ENST00000377050 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
UBD-203ENST00000377050 PREX2Q70Z35 1606 aa16.16■□□□□ 0.18
UBD-203ENST00000377050 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
UBD-203ENST00000377050 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
UBD-203ENST00000377050 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
UBD-203ENST00000377050 DNMT1P26358 1616 aaKnown RBP16.13■□□□□ 0.17
UBD-203ENST00000377050 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
UBD-203ENST00000377050 SAMD9LQ8IVG5 1584 aa16.1■□□□□ 0.17
UBD-203ENST00000377050 NEURL4Q96JN8 1562 aa16.1■□□□□ 0.17
UBD-203ENST00000377050 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
UBD-203ENST00000377050 ALKQ9UM73 1620 aa16.08■□□□□ 0.17
UBD-203ENST00000377050 RGS17Q9UGC6 210 aaPredicted RBP16.08■□□□□ 0.16
UBD-203ENST00000377050 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
UBD-203ENST00000377050 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.16
UBD-203ENST00000377050 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
UBD-203ENST00000377050 RNF17Q9BXT8 1623 aaKnown RBP16.08■□□□□ 0.16
UBD-203ENST00000377050 GGT6Q6P531 493 aa16.07■□□□□ 0.16
UBD-203ENST00000377050 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
UBD-203ENST00000377050 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
UBD-203ENST00000377050 PLXNC1O60486 1568 aa16.06■□□□□ 0.16
UBD-203ENST00000377050 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
UBD-203ENST00000377050 MIER1Q8N108 512 aa16.06■□□□□ 0.16
UBD-203ENST00000377050 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
UBD-203ENST00000377050 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
UBD-203ENST00000377050 A2MP01023 1474 aa16.05■□□□□ 0.16
UBD-203ENST00000377050 SYNMO15061 1565 aa16.04■□□□□ 0.16
UBD-203ENST00000377050 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
UBD-203ENST00000377050 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
UBD-203ENST00000377050 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
UBD-203ENST00000377050 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.16
UBD-203ENST00000377050 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
UBD-203ENST00000377050 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
UBD-203ENST00000377050 TNRQ92752 1358 aa16.01■□□□□ 0.15
UBD-203ENST00000377050 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
UBD-203ENST00000377050 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
UBD-203ENST00000377050 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
UBD-203ENST00000377050 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
UBD-203ENST00000377050 IQGAP1P46940 1657 aa16■□□□□ 0.15
UBD-203ENST00000377050 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
UBD-203ENST00000377050 MED14O60244 1454 aa16■□□□□ 0.15
UBD-203ENST00000377050 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
UBD-203ENST00000377050 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
UBD-203ENST00000377050 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
UBD-203ENST00000377050 FAM135AQ9P2D6 1515 aa15.98■□□□□ 0.15
UBD-203ENST00000377050 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
UBD-203ENST00000377050 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
UBD-203ENST00000377050 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
UBD-203ENST00000377050 UGGT1Q9NYU2 1555 aa15.96■□□□□ 0.14
UBD-203ENST00000377050 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
UBD-203ENST00000377050 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
UBD-203ENST00000377050 PZPP20742 1482 aa15.94■□□□□ 0.14
UBD-203ENST00000377050 KIAA1107Q9UPP5 1409 aa15.94■□□□□ 0.14
UBD-203ENST00000377050 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
UBD-203ENST00000377050 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
UBD-203ENST00000377050 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
UBD-203ENST00000377050 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
UBD-203ENST00000377050 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
UBD-203ENST00000377050 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
UBD-203ENST00000377050 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
UBD-203ENST00000377050 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
UBD-203ENST00000377050 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
UBD-203ENST00000377050 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
UBD-203ENST00000377050 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
UBD-203ENST00000377050 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
UBD-203ENST00000377050 ZC3H13Q5T200 1668 aaKnown RBP15.84■□□□□ 0.13
UBD-203ENST00000377050 KIF3BO15066 747 aa15.84■□□□□ 0.13
UBD-203ENST00000377050 UPF1Q92900 1129 aaKnown RBP eCLIP15.84■□□□□ 0.13
UBD-203ENST00000377050 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
UBD-203ENST00000377050 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
UBD-203ENST00000377050 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
UBD-203ENST00000377050 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
UBD-203ENST00000377050 ITGAEP38570 1179 aa15.81■□□□□ 0.12
UBD-203ENST00000377050 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
UBD-203ENST00000377050 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
UBD-203ENST00000377050 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
UBD-203ENST00000377050 ROBO1Q9Y6N7 1651 aa15.81■□□□□ 0.12
UBD-203ENST00000377050 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
UBD-203ENST00000377050 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
UBD-203ENST00000377050 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.12
UBD-203ENST00000377050 JCADQ9P266 1359 aa15.76■□□□□ 0.11
UBD-203ENST00000377050 ZNF772Q68DY9 489 aaPredicted RBP15.76■□□□□ 0.11
UBD-203ENST00000377050 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
UBD-203ENST00000377050 TRIM52Q96A61 297 aa15.75■□□□□ 0.11
UBD-203ENST00000377050 GCC2Q8IWJ2 1684 aa15.75■□□□□ 0.11
UBD-203ENST00000377050 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
UBD-203ENST00000377050 NAIPQ13075 1403 aa15.74■□□□□ 0.11
UBD-203ENST00000377050 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
UBD-203ENST00000377050 MEX3CQ5U5Q3 659 aaKnown RBP15.73■□□□□ 0.11
UBD-203ENST00000377050 EID1Q9Y6B2 187 aa15.73■□□□□ 0.11
UBD-203ENST00000377050 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms