RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PLCD3Q8N3E9 789 aa15.65■□□□□ 0.1
C9orf85-202ENST00000377027 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
C9orf85-202ENST00000377027 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
C9orf85-202ENST00000377027 HSPA2P54652 639 aa15.63■□□□□ 0.09
C9orf85-202ENST00000377027 C3P01024 1663 aa15.62■□□□□ 0.09
C9orf85-202ENST00000377027 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
C9orf85-202ENST00000377027 GPATCH8Q9UKJ3 1502 aaKnown RBP15.61■□□□□ 0.09
C9orf85-202ENST00000377027 AGLP35573 1532 aa15.6■□□□□ 0.09
C9orf85-202ENST00000377027 STRCQ7RTU9 1775 aa15.59■□□□□ 0.09
C9orf85-202ENST00000377027 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
C9orf85-202ENST00000377027 CEBPAP49715 358 aaPredicted RBP15.58■□□□□ 0.08
C9orf85-202ENST00000377027 POTEHQ6S545 545 aa15.58■□□□□ 0.08
C9orf85-202ENST00000377027 INO80Q9ULG1 1556 aaPredicted RBP15.58■□□□□ 0.08
C9orf85-202ENST00000377027 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
C9orf85-202ENST00000377027 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
C9orf85-202ENST00000377027 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
C9orf85-202ENST00000377027 PLXNC1O60486 1568 aa15.54■□□□□ 0.08
C9orf85-202ENST00000377027 SUPT6HQ7KZ85 1726 aaKnown RBP15.54■□□□□ 0.08
C9orf85-202ENST00000377027 FBXO41Q8TF61 875 aa15.53■□□□□ 0.08
C9orf85-202ENST00000377027 ATP7AQ04656 1500 aa15.53■□□□□ 0.08
C9orf85-202ENST00000377027 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
C9orf85-202ENST00000377027 SETD1BQ9UPS6 1966 aaKnown RBP15.52■□□□□ 0.07
C9orf85-202ENST00000377027 MROH2AA6NES4 1674 aa15.51■□□□□ 0.07
C9orf85-202ENST00000377027 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
C9orf85-202ENST00000377027 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
C9orf85-202ENST00000377027 HNRNPMP52272 730 aaKnown RBP eCLIP15.49■□□□□ 0.076e-6■■■■□ 20.3
C9orf85-202ENST00000377027 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
C9orf85-202ENST00000377027 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
C9orf85-202ENST00000377027 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
C9orf85-202ENST00000377027 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
C9orf85-202ENST00000377027 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
C9orf85-202ENST00000377027 MBD5Q9P267 1494 aa15.47■□□□□ 0.07
C9orf85-202ENST00000377027 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
C9orf85-202ENST00000377027 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
C9orf85-202ENST00000377027 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
C9orf85-202ENST00000377027 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
C9orf85-202ENST00000377027 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
C9orf85-202ENST00000377027 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
C9orf85-202ENST00000377027 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
C9orf85-202ENST00000377027 A2MP01023 1474 aa15.44■□□□□ 0.06
C9orf85-202ENST00000377027 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
C9orf85-202ENST00000377027 CFDP1Q9UEE9 299 aaPredicted RBP15.43■□□□□ 0.06
C9orf85-202ENST00000377027 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
C9orf85-202ENST00000377027 ZNF142P52746 1687 aaPredicted RBP15.42■□□□□ 0.06
C9orf85-202ENST00000377027 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
C9orf85-202ENST00000377027 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
C9orf85-202ENST00000377027 CERKQ8TCT0 537 aa15.39■□□□□ 0.05
C9orf85-202ENST00000377027 NPATQ14207 1427 aa15.39■□□□□ 0.05
C9orf85-202ENST00000377027 NCOA1Q15788 1441 aa15.39■□□□□ 0.05
C9orf85-202ENST00000377027 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
C9orf85-202ENST00000377027 LTBP4Q8N2S1 1624 aa15.38■□□□□ 0.05
C9orf85-202ENST00000377027 ZMYM3Q14202 1370 aa15.37■□□□□ 0.05
C9orf85-202ENST00000377027 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
C9orf85-202ENST00000377027 PTPRTO14522 1441 aa15.36■□□□□ 0.05
C9orf85-202ENST00000377027 PTPRKQ15262 1439 aa15.36■□□□□ 0.05
C9orf85-202ENST00000377027 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
C9orf85-202ENST00000377027 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
C9orf85-202ENST00000377027 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
C9orf85-202ENST00000377027 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
C9orf85-202ENST00000377027 ARHGEF5Q12774 1597 aa15.33■□□□□ 0.05
C9orf85-202ENST00000377027 LOC105371045A0A1W2PR82 267 aa15.33■□□□□ 0.04
C9orf85-202ENST00000377027 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.04
C9orf85-202ENST00000377027 NUBP1P53384 320 aa15.32■□□□□ 0.04
C9orf85-202ENST00000377027 SPOCK2Q92563 424 aa15.32■□□□□ 0.04
C9orf85-202ENST00000377027 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
C9orf85-202ENST00000377027 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
C9orf85-202ENST00000377027 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
C9orf85-202ENST00000377027 HAX1O00165 279 aa15.3■□□□□ 0.04
C9orf85-202ENST00000377027 GGT6Q6P531 493 aa15.3■□□□□ 0.04
C9orf85-202ENST00000377027 DNMT1P26358 1616 aaKnown RBP15.29■□□□□ 0.04
C9orf85-202ENST00000377027 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
C9orf85-202ENST00000377027 MAST1Q9Y2H9 1570 aa15.28■□□□□ 0.04
C9orf85-202ENST00000377027 PLA2R1Q13018 1463 aa15.28■□□□□ 0.04
C9orf85-202ENST00000377027 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.04
C9orf85-202ENST00000377027 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
C9orf85-202ENST00000377027 MROH1Q8NDA8 1641 aa15.27■□□□□ 0.03
C9orf85-202ENST00000377027 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
C9orf85-202ENST00000377027 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
C9orf85-202ENST00000377027 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
C9orf85-202ENST00000377027 NEURL4Q96JN8 1562 aa15.26■□□□□ 0.03
C9orf85-202ENST00000377027 FAM135AQ9P2D6 1515 aa15.26■□□□□ 0.03
C9orf85-202ENST00000377027 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
C9orf85-202ENST00000377027 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
C9orf85-202ENST00000377027 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
C9orf85-202ENST00000377027 PZPP20742 1482 aa15.25■□□□□ 0.03
C9orf85-202ENST00000377027 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
C9orf85-202ENST00000377027 CROCC2H7BZ55 1655 aa15.23■□□□□ 0.03
C9orf85-202ENST00000377027 IQSEC2Q5JU85 1478 aa15.22■□□□□ 0.03
C9orf85-202ENST00000377027 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
C9orf85-202ENST00000377027 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
C9orf85-202ENST00000377027 CEP152O94986 1710 aa15.22■□□□□ 0.03
C9orf85-202ENST00000377027 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
C9orf85-202ENST00000377027 KIF3BO15066 747 aa15.21■□□□□ 0.03
C9orf85-202ENST00000377027 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.03
C9orf85-202ENST00000377027 ZNF335Q9H4Z2 1342 aaPredicted RBP15.2■□□□□ 0.02
C9orf85-202ENST00000377027 EVX2Q03828 476 aa15.2■□□□□ 0.02
C9orf85-202ENST00000377027 ABCC3O15438 1527 aa15.2■□□□□ 0.02
C9orf85-202ENST00000377027 MIA2Q96PC5 1412 aa15.18■□□□□ 0.02
C9orf85-202ENST00000377027 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
C9orf85-202ENST00000377027 TNRQ92752 1358 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms