RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 PTPRMP28827 1452 aa30.18■■■□□ 2.42
DDR1-228ENST00000376575 RIMS1Q86UR5 1692 aaKnown RBP30.17■■■□□ 2.42
DDR1-228ENST00000376575 FAM135AQ9P2D6 1515 aa30.17■■■□□ 2.42
DDR1-228ENST00000376575 DEPDC5O75140 1603 aa30.17■■■□□ 2.42
DDR1-228ENST00000376575 CNTLNQ9NXG0 1405 aa30.15■■■□□ 2.42
DDR1-228ENST00000376575 NAIPQ13075 1403 aa30.13■■■□□ 2.41
DDR1-228ENST00000376575 PRDM15P57071 1507 aaPredicted RBP30.12■■■□□ 2.41
DDR1-228ENST00000376575 HFM1A2PYH4 1435 aa30.12■■■□□ 2.41
DDR1-228ENST00000376575 KDM5DQ9BY66 1539 aa30.12■■■□□ 2.41
DDR1-228ENST00000376575 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
DDR1-228ENST00000376575 GCC2Q8IWJ2 1684 aa30.09■■■□□ 2.41
DDR1-228ENST00000376575 CLTCQ00610 1675 aaKnown RBP30.08■■■□□ 2.41
DDR1-228ENST00000376575 VWDEQ8N2E2 1590 aa30.07■■■□□ 2.4
DDR1-228ENST00000376575 ABCC3O15438 1527 aa30.05■■■□□ 2.4
DDR1-228ENST00000376575 ZC3H13Q5T200 1668 aaKnown RBP30.04■■■□□ 2.4
DDR1-228ENST00000376575 ZMYM3Q14202 1370 aa30.04■■■□□ 2.4
DDR1-228ENST00000376575 ESF1Q9H501 851 aaKnown RBP30.04■■■□□ 2.4
DDR1-228ENST00000376575 C3P01024 1663 aa30.04■■■□□ 2.4
DDR1-228ENST00000376575 UNC13BO14795 1591 aa30.03■■■□□ 2.4
DDR1-228ENST00000376575 WASHC2CQ9Y4E1 1318 aa30.02■■■□□ 2.4
DDR1-228ENST00000376575 LMTK2Q8IWU2 1503 aa30■■■□□ 2.39
DDR1-228ENST00000376575 CEBPAP49715 358 aaPredicted RBP29.98■■■□□ 2.39
DDR1-228ENST00000376575 CEP152O94986 1710 aa29.96■■■□□ 2.39
DDR1-228ENST00000376575 KANK1Q14678 1352 aa29.95■■■□□ 2.39
DDR1-228ENST00000376575 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
DDR1-228ENST00000376575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.95■■■□□ 2.39
DDR1-228ENST00000376575 ARHGAP31Q2M1Z3 1444 aa29.93■■■□□ 2.38
DDR1-228ENST00000376575 PZPP20742 1482 aa29.93■■■□□ 2.38
DDR1-228ENST00000376575 CAMSAP1Q5T5Y3 1602 aa29.93■■■□□ 2.38
DDR1-228ENST00000376575 SETD1BQ9UPS6 1966 aaKnown RBP29.92■■■□□ 2.38
DDR1-228ENST00000376575 NPATQ14207 1427 aa29.92■■■□□ 2.38
DDR1-228ENST00000376575 IQGAP3Q86VI3 1631 aa29.91■■■□□ 2.38
DDR1-228ENST00000376575 SETD5Q9C0A6 1442 aa29.88■■■□□ 2.37
DDR1-228ENST00000376575 NUP155O75694 1391 aa29.87■■■□□ 2.37
DDR1-228ENST00000376575 EFCAB6Q5THR3 1501 aa29.86■■■□□ 2.37
DDR1-228ENST00000376575 TET3O43151 1660 aa29.85■■■□□ 2.37
DDR1-228ENST00000376575 PLPPR3Q6T4P5 718 aa29.83■■■□□ 2.37
DDR1-228ENST00000376575 FBXO31Q5XUX0 539 aaPredicted RBP29.82■■■□□ 2.36
DDR1-228ENST00000376575 SPATA31D1Q6ZQQ2 1576 aa29.81■■■□□ 2.36
DDR1-228ENST00000376575 TRIM26Q12899 539 aaPredicted RBP29.8■■■□□ 2.36
DDR1-228ENST00000376575 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
DDR1-228ENST00000376575 ERVK-7P63135 1459 aa29.79■■■□□ 2.36
DDR1-228ENST00000376575 PREX1Q8TCU6 1659 aa29.79■■■□□ 2.36
DDR1-228ENST00000376575 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
DDR1-228ENST00000376575 HRCP23327 699 aa29.78■■■□□ 2.36
DDR1-228ENST00000376575 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
DDR1-228ENST00000376575 LMTK3Q96Q04 1460 aa29.76■■■□□ 2.35
DDR1-228ENST00000376575 CFAP65Q6ZU64 1925 aaKnown RBP29.75■■■□□ 2.35
DDR1-228ENST00000376575 E9PCH4 1651 aa29.75■■■□□ 2.35
DDR1-228ENST00000376575 NOS1P29475 1434 aa29.74■■■□□ 2.35
DDR1-228ENST00000376575 TNRQ92752 1358 aa29.74■■■□□ 2.35
DDR1-228ENST00000376575 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
DDR1-228ENST00000376575 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
DDR1-228ENST00000376575 TRIM52Q96A61 297 aa29.7■■■□□ 2.35
DDR1-228ENST00000376575 ZNF142P52746 1687 aaPredicted RBP29.68■■■□□ 2.34
DDR1-228ENST00000376575 NLRP1Q9C000 1473 aa29.67■■■□□ 2.34
DDR1-228ENST00000376575 SYNMO15061 1565 aa29.66■■■□□ 2.34
DDR1-228ENST00000376575 A2ML1A8K2U0 1454 aa29.64■■■□□ 2.34
DDR1-228ENST00000376575 CEP170BQ9Y4F5 1589 aaPredicted RBP29.64■■■□□ 2.33
DDR1-228ENST00000376575 PTPRTO14522 1441 aa29.62■■■□□ 2.33
DDR1-228ENST00000376575 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
DDR1-228ENST00000376575 MPHOSPH9Q99550 1183 aa29.61■■■□□ 2.33
DDR1-228ENST00000376575 PKD2Q13563 968 aa29.59■■■□□ 2.33
DDR1-228ENST00000376575 PIK3C2BO00750 1634 aa29.57■■■□□ 2.32
DDR1-228ENST00000376575 SLC52A1Q9NWF4 448 aa29.57■■■□□ 2.32
DDR1-228ENST00000376575 SPHKAPQ2M3C7 1700 aa29.56■■■□□ 2.32
DDR1-228ENST00000376575 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
DDR1-228ENST00000376575 IDI1Q13907 227 aa29.55■■■□□ 2.32
DDR1-228ENST00000376575 HSPA2P54652 639 aa29.53■■■□□ 2.32
DDR1-228ENST00000376575 KDM5AP29375 1690 aaKnown RBP29.53■■■□□ 2.32
DDR1-228ENST00000376575 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
DDR1-228ENST00000376575 UBR1Q8IWV7 1749 aa29.51■■■□□ 2.32
DDR1-228ENST00000376575 TRPM2O94759 1503 aa29.51■■■□□ 2.32
DDR1-228ENST00000376575 FOXD1Q16676 465 aa29.46■■■□□ 2.31
DDR1-228ENST00000376575 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
DDR1-228ENST00000376575 ADGRB3O60242 1522 aa29.45■■■□□ 2.3
DDR1-228ENST00000376575 STRCQ7RTU9 1775 aa29.44■■■□□ 2.3
DDR1-228ENST00000376575 TMEM131LA2VDJ0 1609 aa29.43■■■□□ 2.3
DDR1-228ENST00000376575 CLTCL1P53675 1640 aa29.42■■■□□ 2.3
DDR1-228ENST00000376575 ARHGAP23Q9P227 1491 aa29.41■■■□□ 2.3
DDR1-228ENST00000376575 SLIT1O75093 1534 aa29.4■■■□□ 2.3
DDR1-228ENST00000376575 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
DDR1-228ENST00000376575 ANKRD30BQ9BXX2 1392 aa29.37■■■□□ 2.29
DDR1-228ENST00000376575 TMEM2Q9UHN6 1383 aa29.36■■■□□ 2.29
DDR1-228ENST00000376575 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
DDR1-228ENST00000376575 STAG3Q9UJ98 1225 aa29.33■■■□□ 2.29
DDR1-228ENST00000376575 KIF1BO60333 1816 aa29.31■■■□□ 2.28
DDR1-228ENST00000376575 POLR1AO95602 1720 aaPredicted RBP29.31■■■□□ 2.28
DDR1-228ENST00000376575 NEURL4Q96JN8 1562 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 MED14O60244 1454 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 CCDC144AA2RUR9 1427 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 ZFYVE9O95405 1425 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 NCKAP5LQ9HCH0 1330 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 ANKLE2Q86XL3 938 aa29.3■■■□□ 2.28
DDR1-228ENST00000376575 LTKP29376 864 aa29.28■■■□□ 2.28
DDR1-228ENST00000376575 DHX57Q6P158 1386 aaKnown RBP29.26■■■□□ 2.28
DDR1-228ENST00000376575 SCAF11Q99590 1463 aaKnown RBP29.26■■■□□ 2.27
DDR1-228ENST00000376575 DMRT2Q9Y5R5 561 aa29.25■■■□□ 2.27
DDR1-228ENST00000376575 SPATA31E1Q6ZUB1 1445 aa29.25■■■□□ 2.27
DDR1-228ENST00000376575 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms