RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
CHRDL2-202ENST00000376324 UNC13BO14795 1591 aa21.75■■□□□ 1.07
CHRDL2-202ENST00000376324 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
CHRDL2-202ENST00000376324 PZPP20742 1482 aa21.73■■□□□ 1.07
CHRDL2-202ENST00000376324 GGT6Q6P531 493 aa21.72■■□□□ 1.07
CHRDL2-202ENST00000376324 DEPDC5O75140 1603 aa21.7■■□□□ 1.06
CHRDL2-202ENST00000376324 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
CHRDL2-202ENST00000376324 FOXD1Q16676 465 aa21.69■■□□□ 1.06
CHRDL2-202ENST00000376324 REREQ9P2R6 1566 aa21.68■■□□□ 1.06
CHRDL2-202ENST00000376324 SIGLEC1Q9BZZ2 1709 aa21.68■■□□□ 1.06
CHRDL2-202ENST00000376324 KANK1Q14678 1352 aa21.68■■□□□ 1.06
CHRDL2-202ENST00000376324 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
CHRDL2-202ENST00000376324 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
CHRDL2-202ENST00000376324 RNF17Q9BXT8 1623 aaKnown RBP21.67■■□□□ 1.06
CHRDL2-202ENST00000376324 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
CHRDL2-202ENST00000376324 IQGAP3Q86VI3 1631 aa21.67■■□□□ 1.06
CHRDL2-202ENST00000376324 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
CHRDL2-202ENST00000376324 PKD2Q13563 968 aa21.66■■□□□ 1.06
CHRDL2-202ENST00000376324 MLECQ14165 292 aa21.66■■□□□ 1.06
CHRDL2-202ENST00000376324 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
CHRDL2-202ENST00000376324 AGLP35573 1532 aa21.64■■□□□ 1.05
CHRDL2-202ENST00000376324 CEP152O94986 1710 aa21.62■■□□□ 1.05
CHRDL2-202ENST00000376324 VWDEQ8N2E2 1590 aa21.6■■□□□ 1.05
CHRDL2-202ENST00000376324 WASHC2CQ9Y4E1 1318 aa21.6■■□□□ 1.05
CHRDL2-202ENST00000376324 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
CHRDL2-202ENST00000376324 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.05
CHRDL2-202ENST00000376324 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
CHRDL2-202ENST00000376324 TET3O43151 1660 aa21.57■■□□□ 1.04
CHRDL2-202ENST00000376324 ABCC3O15438 1527 aa21.56■■□□□ 1.04
CHRDL2-202ENST00000376324 E9PCH4 1651 aa21.54■■□□□ 1.04
CHRDL2-202ENST00000376324 ANKRD30BQ9BXX2 1392 aa21.53■■□□□ 1.04
CHRDL2-202ENST00000376324 LMTK2Q8IWU2 1503 aa21.52■■□□□ 1.04
CHRDL2-202ENST00000376324 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
CHRDL2-202ENST00000376324 EFCAB6Q5THR3 1501 aa21.51■■□□□ 1.03
CHRDL2-202ENST00000376324 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
CHRDL2-202ENST00000376324 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
CHRDL2-202ENST00000376324 ESF1Q9H501 851 aaKnown RBP21.5■■□□□ 1.03
CHRDL2-202ENST00000376324 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
CHRDL2-202ENST00000376324 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
CHRDL2-202ENST00000376324 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
CHRDL2-202ENST00000376324 NPATQ14207 1427 aa21.45■■□□□ 1.02
CHRDL2-202ENST00000376324 PLA2R1Q13018 1463 aa21.44■■□□□ 1.02
CHRDL2-202ENST00000376324 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
CHRDL2-202ENST00000376324 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
CHRDL2-202ENST00000376324 CCDC144AA2RUR9 1427 aa21.41■■□□□ 1.02
CHRDL2-202ENST00000376324 FER1L4A9Z1Z3 1794 aa21.4■■□□□ 1.02
CHRDL2-202ENST00000376324 ARHGAP31Q2M1Z3 1444 aa21.4■■□□□ 1.02
CHRDL2-202ENST00000376324 PTPRTO14522 1441 aa21.39■■□□□ 1.02
CHRDL2-202ENST00000376324 TONSLQ96HA7 1378 aa21.39■■□□□ 1.01
CHRDL2-202ENST00000376324 TRPM2O94759 1503 aa21.38■■□□□ 1.01
CHRDL2-202ENST00000376324 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
CHRDL2-202ENST00000376324 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
CHRDL2-202ENST00000376324 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
CHRDL2-202ENST00000376324 CNTLNQ9NXG0 1405 aa21.37■■□□□ 1.01
CHRDL2-202ENST00000376324 UGGT1Q9NYU2 1555 aa21.36■■□□□ 1.01
CHRDL2-202ENST00000376324 PREX1Q8TCU6 1659 aa21.36■■□□□ 1.01
CHRDL2-202ENST00000376324 CLTCL1P53675 1640 aa21.35■■□□□ 1.01
CHRDL2-202ENST00000376324 MADDQ8WXG6 1647 aa21.35■■□□□ 1.01
CHRDL2-202ENST00000376324 NOS1P29475 1434 aa21.34■■□□□ 1.01
CHRDL2-202ENST00000376324 CEBPAP49715 358 aaPredicted RBP21.33■■□□□ 1
CHRDL2-202ENST00000376324 MROH2AA6NES4 1674 aa21.33■■□□□ 1
CHRDL2-202ENST00000376324 ERVK-7P63135 1459 aa21.33■■□□□ 1
CHRDL2-202ENST00000376324 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
CHRDL2-202ENST00000376324 SYNMO15061 1565 aa21.32■■□□□ 1
CHRDL2-202ENST00000376324 ADAMTSL3P82987 1691 aa21.31■■□□□ 1
CHRDL2-202ENST00000376324 RGL3Q3MIN7 710 aa21.31■■□□□ 1
CHRDL2-202ENST00000376324 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
CHRDL2-202ENST00000376324 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
CHRDL2-202ENST00000376324 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
CHRDL2-202ENST00000376324 C3P01024 1663 aa21.29■■□□□ 1
CHRDL2-202ENST00000376324 SPATA31D1Q6ZQQ2 1576 aa21.27■■□□□ 1
CHRDL2-202ENST00000376324 KIF1BO60333 1816 aa21.27■□□□□ 0.99
CHRDL2-202ENST00000376324 IDI1Q13907 227 aa21.25■□□□□ 0.99
CHRDL2-202ENST00000376324 PIK3C2BO00750 1634 aa21.24■□□□□ 0.99
CHRDL2-202ENST00000376324 SLC52A1Q9NWF4 448 aa21.24■□□□□ 0.99
CHRDL2-202ENST00000376324 TNRQ92752 1358 aa21.23■□□□□ 0.99
CHRDL2-202ENST00000376324 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
CHRDL2-202ENST00000376324 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
CHRDL2-202ENST00000376324 SPATA31E1Q6ZUB1 1445 aa21.23■□□□□ 0.99
CHRDL2-202ENST00000376324 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
CHRDL2-202ENST00000376324 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
CHRDL2-202ENST00000376324 STAG3Q9UJ98 1225 aa21.19■□□□□ 0.98
CHRDL2-202ENST00000376324 ADGRB3O60242 1522 aa21.18■□□□□ 0.98
CHRDL2-202ENST00000376324 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
CHRDL2-202ENST00000376324 PTPRMP28827 1452 aa21.15■□□□□ 0.98
CHRDL2-202ENST00000376324 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
CHRDL2-202ENST00000376324 TMEM131LA2VDJ0 1609 aa21.14■□□□□ 0.97
CHRDL2-202ENST00000376324 NEURL4Q96JN8 1562 aa21.13■□□□□ 0.97
CHRDL2-202ENST00000376324 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
CHRDL2-202ENST00000376324 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
CHRDL2-202ENST00000376324 NLRP1Q9C000 1473 aa21.09■□□□□ 0.97
CHRDL2-202ENST00000376324 A2ML1A8K2U0 1454 aa21.09■□□□□ 0.97
CHRDL2-202ENST00000376324 MYO3AQ8NEV4 1616 aa21.08■□□□□ 0.97
CHRDL2-202ENST00000376324 IFT172Q9UG01 1749 aa21.08■□□□□ 0.97
CHRDL2-202ENST00000376324 PPLO60437 1756 aa21.07■□□□□ 0.96
CHRDL2-202ENST00000376324 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
CHRDL2-202ENST00000376324 UBR1Q8IWV7 1749 aa21.06■□□□□ 0.96
CHRDL2-202ENST00000376324 PRAG1Q86YV5 1406 aa21.06■□□□□ 0.96
CHRDL2-202ENST00000376324 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
CHRDL2-202ENST00000376324 NEXMIFQ5QGS0 1516 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms