RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 KIF2AO00139 706 aaPredicted RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 TUBB4BP68371 445 aa8.1□□□□□ -1.11
UBR4-204ENST00000375254 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 KCNJ4P48050 445 aa8.09□□□□□ -1.11
UBR4-204ENST00000375254 TMCO5BA8MYB1 307 aa8.09□□□□□ -1.11
UBR4-204ENST00000375254 CCDC91Q7Z6B0 441 aa8.09□□□□□ -1.11
UBR4-204ENST00000375254 KIAA1328Q86T90 577 aa8.09□□□□□ -1.11
UBR4-204ENST00000375254 SMAP1Q8IYB5 467 aaPredicted RBP8.09□□□□□ -1.11
UBR4-204ENST00000375254 HSP90AB3PQ58FF7 597 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 MICALCLQ6ZW33 695 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 MBD3O95983 291 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 RUFY1Q96T51 708 aa8.08□□□□□ -1.12
UBR4-204ENST00000375254 CCAR2Q8N163 923 aaKnown RBP8.08□□□□□ -1.12
UBR4-204ENST00000375254 HOOK1Q9UJC3 728 aaKnown RBP8.08□□□□□ -1.12
UBR4-204ENST00000375254 HS1BP3Q53T59 392 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 TUBB4AP04350 444 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 MYO6Q9UM54 1294 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 IVLP07476 585 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 TERF1P54274 439 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 PRIMPOLQ96LW4 560 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 SPRYD3Q8NCJ5 442 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 LUZP1Q86V48 1076 aa8.07□□□□□ -1.12
UBR4-204ENST00000375254 PLCD4Q9BRC7 762 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 IFT57Q9NWB7 429 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 LIG1P18858 919 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 BRPF3Q9ULD4 1205 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 NCBP3Q53F19 620 aaKnown RBP8.06□□□□□ -1.12
UBR4-204ENST00000375254 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
UBR4-204ENST00000375254 FEZ1Q99689 392 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 RABEP1Q15276 862 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 CCDC112Q8NEF3 446 aa8.06□□□□□ -1.12
UBR4-204ENST00000375254 ERLIN1O75477 346 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 MCM3P25205 808 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 CGNQ9P2M7 1197 aaKnown RBP8.05□□□□□ -1.12
UBR4-204ENST00000375254 A6NNZ2 444 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 TUBB8Q3ZCM7 444 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 V9GYY5 206 aaPredicted RBP8.05□□□□□ -1.12
UBR4-204ENST00000375254 MCM2P49736 904 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
UBR4-204ENST00000375254 REC8O95072 547 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 CIZ1Q9ULV3 898 aaPredicted RBP8.05□□□□□ -1.12
UBR4-204ENST00000375254 CLCN1P35523 988 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 SASS6Q6UVJ0 657 aa8.05□□□□□ -1.12
UBR4-204ENST00000375254 EEA1Q15075 1411 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 NAP1L2Q9ULW6 460 aaPredicted RBP8.04□□□□□ -1.12
UBR4-204ENST00000375254 CREBRFQ8IUR6 639 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 ANKRD20A12PQ8NF67 263 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 ZNF622Q969S3 477 aaKnown RBP eCLIP8.04□□□□□ -1.123e-11■■□□□ 11.4
UBR4-204ENST00000375254 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 SLC26A8Q96RN1 970 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 SWAP70Q9UH65 585 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 UQCRHP07919 91 aa8.04□□□□□ -1.12
UBR4-204ENST00000375254 HSPA5P11021 654 aaKnown RBP8.03□□□□□ -1.12
UBR4-204ENST00000375254 TXLNBQ8N3L3 684 aa8.03□□□□□ -1.12
UBR4-204ENST00000375254 CEP89Q96ST8 783 aa8.02□□□□□ -1.13
UBR4-204ENST00000375254 TPD52L1Q16890 204 aaPredicted RBP8.02□□□□□ -1.13
UBR4-204ENST00000375254 TUBBP07437 444 aa8.02□□□□□ -1.13
UBR4-204ENST00000375254 GRPEL1Q9HAV7 217 aa8.02□□□□□ -1.13
UBR4-204ENST00000375254 TDO2P48775 406 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 NF2P35240 595 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 MEX3CQ5U5Q3 659 aaKnown RBP8.01□□□□□ -1.13
UBR4-204ENST00000375254 KIF3CO14782 793 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 FAM193AP78312 1265 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
UBR4-204ENST00000375254 GOLGA6L9A6NEM1 432 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 CPSF2Q9P2I0 782 aaKnown RBP8.01□□□□□ -1.13
UBR4-204ENST00000375254 IQCEQ6IPM2 695 aa8.01□□□□□ -1.13
UBR4-204ENST00000375254 KIF18AQ8NI77 898 aa8□□□□□ -1.13
UBR4-204ENST00000375254 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
UBR4-204ENST00000375254 BMS1Q14692 1282 aaKnown RBP8□□□□□ -1.13
UBR4-204ENST00000375254 SH3BGRP55822 239 aaPredicted RBP8□□□□□ -1.13
UBR4-204ENST00000375254 SARNPP82979 210 aaKnown RBP8□□□□□ -1.13
UBR4-204ENST00000375254 CT47B1P0C2W7 299 aaPredicted RBP8□□□□□ -1.13
UBR4-204ENST00000375254 GPATCH11Q8N954 259 aa8□□□□□ -1.13
UBR4-204ENST00000375254 POTEB2H3BUK9 544 aa8□□□□□ -1.13
UBR4-204ENST00000375254 NEMFO60524 1076 aa8□□□□□ -1.13
UBR4-204ENST00000375254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8□□□□□ -1.13
UBR4-204ENST00000375254 SF3A1Q15459 793 aaKnown RBP8□□□□□ -1.13
UBR4-204ENST00000375254 PHLDB1Q86UU1 1377 aa8□□□□□ -1.13
UBR4-204ENST00000375254 CT47A1Q5JQC4 288 aaPredicted RBP8□□□□□ -1.13
UBR4-204ENST00000375254 SPATA24Q86W54 205 aa8□□□□□ -1.13
UBR4-204ENST00000375254 MIPOL1Q8TD10 442 aa8□□□□□ -1.13
UBR4-204ENST00000375254 UBXN4Q92575 508 aa8□□□□□ -1.13
UBR4-204ENST00000375254 GOLGA2Q08379 1002 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 TMCO3Q6UWJ1 677 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 CCDC50Q8IVM0 306 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 SEPT14Q6ZU15 432 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms