RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
HLA-DOA-202ENST00000374813 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
HLA-DOA-202ENST00000374813 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOA-202ENST00000374813 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOA-202ENST00000374813 POTEAQ6S8J7 498 aa15.46■□□□□ 0.07
HLA-DOA-202ENST00000374813 DEPDC5O75140 1603 aa15.46■□□□□ 0.06
HLA-DOA-202ENST00000374813 LRRC7Q96NW7 1537 aa15.45■□□□□ 0.06
HLA-DOA-202ENST00000374813 FAM135AQ9P2D6 1515 aa15.45■□□□□ 0.06
HLA-DOA-202ENST00000374813 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
HLA-DOA-202ENST00000374813 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
HLA-DOA-202ENST00000374813 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
HLA-DOA-202ENST00000374813 NLRP1Q9C000 1473 aa15.44■□□□□ 0.06
HLA-DOA-202ENST00000374813 WASHC2CQ9Y4E1 1318 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 PZPP20742 1482 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 UGGT1Q9NYU2 1555 aa15.43■□□□□ 0.06
HLA-DOA-202ENST00000374813 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
HLA-DOA-202ENST00000374813 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
HLA-DOA-202ENST00000374813 KIF3BO15066 747 aa15.41■□□□□ 0.06
HLA-DOA-202ENST00000374813 SYNMO15061 1565 aa15.41■□□□□ 0.06
HLA-DOA-202ENST00000374813 SRCAPQ6ZRS2 3230 aa15.4■□□□□ 0.06
HLA-DOA-202ENST00000374813 RTEL1-TNFRSF6BF6WH68 1400 aa15.39■□□□□ 0.05
HLA-DOA-202ENST00000374813 CCNB3Q8WWL7 1395 aa15.38■□□□□ 0.05
HLA-DOA-202ENST00000374813 FAM135BQ49AJ0 1406 aa15.38■□□□□ 0.05
HLA-DOA-202ENST00000374813 STRCP1A6NGW2 1772 aa15.38■□□□□ 0.05
HLA-DOA-202ENST00000374813 KDM5DQ9BY66 1539 aa15.37■□□□□ 0.05
HLA-DOA-202ENST00000374813 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
HLA-DOA-202ENST00000374813 FYCO1Q9BQS8 1478 aa15.32■□□□□ 0.04
HLA-DOA-202ENST00000374813 UPF1Q92900 1129 aaKnown RBP eCLIP15.3■□□□□ 0.04
HLA-DOA-202ENST00000374813 ZNF644Q9H582 1327 aaPredicted RBP15.3■□□□□ 0.04
HLA-DOA-202ENST00000374813 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
HLA-DOA-202ENST00000374813 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
HLA-DOA-202ENST00000374813 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
HLA-DOA-202ENST00000374813 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
HLA-DOA-202ENST00000374813 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.03
HLA-DOA-202ENST00000374813 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.03
HLA-DOA-202ENST00000374813 XIRP1Q702N8 1843 aaKnown RBP15.26■□□□□ 0.03
HLA-DOA-202ENST00000374813 SETD1AO15047 1707 aaKnown RBP15.26■□□□□ 0.03
HLA-DOA-202ENST00000374813 LTKP29376 864 aa15.25■□□□□ 0.03
HLA-DOA-202ENST00000374813 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOA-202ENST00000374813 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
HLA-DOA-202ENST00000374813 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
HLA-DOA-202ENST00000374813 JCADQ9P266 1359 aa15.24■□□□□ 0.03
HLA-DOA-202ENST00000374813 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
HLA-DOA-202ENST00000374813 TMEM94Q12767 1356 aa15.23■□□□□ 0.03
HLA-DOA-202ENST00000374813 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
HLA-DOA-202ENST00000374813 KCNA6P17658 529 aa15.22■□□□□ 0.03
HLA-DOA-202ENST00000374813 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
HLA-DOA-202ENST00000374813 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
HLA-DOA-202ENST00000374813 CCDC141Q6ZP82 1450 aa15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 CFAP65Q6ZU64 1925 aaKnown RBP15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 SLIT1O75093 1534 aa15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 ERVK-7P63135 1459 aa15.2■□□□□ 0.02
HLA-DOA-202ENST00000374813 MEX3CQ5U5Q3 659 aaKnown RBP15.19■□□□□ 0.02
HLA-DOA-202ENST00000374813 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
HLA-DOA-202ENST00000374813 ARHGAP23Q9P227 1491 aa15.19■□□□□ 0.02
HLA-DOA-202ENST00000374813 SPATA31A6Q5VVP1 1343 aa15.18■□□□□ 0.02
HLA-DOA-202ENST00000374813 RXRBP28702 533 aa15.18■□□□□ 0.02
HLA-DOA-202ENST00000374813 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
HLA-DOA-202ENST00000374813 ABCC3O15438 1527 aa15.17■□□□□ 0.02
HLA-DOA-202ENST00000374813 NCOA2Q15596 1464 aa15.16■□□□□ 0.02
HLA-DOA-202ENST00000374813 MSH6P52701 1360 aa15.16■□□□□ 0.02
HLA-DOA-202ENST00000374813 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
HLA-DOA-202ENST00000374813 PHLPP1O60346 1717 aa15.15■□□□□ 0.02
HLA-DOA-202ENST00000374813 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
HLA-DOA-202ENST00000374813 TMEM2Q9UHN6 1383 aa15.13■□□□□ 0.01
HLA-DOA-202ENST00000374813 FOXD1Q16676 465 aa15.13■□□□□ 0.01
HLA-DOA-202ENST00000374813 FGD6Q6ZV73 1430 aa15.12■□□□□ 0.01
HLA-DOA-202ENST00000374813 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
HLA-DOA-202ENST00000374813 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOA-202ENST00000374813 SLC26A8Q96RN1 970 aa15.11■□□□□ 0.01
HLA-DOA-202ENST00000374813 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
HLA-DOA-202ENST00000374813 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOA-202ENST00000374813 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
HLA-DOA-202ENST00000374813 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
HLA-DOA-202ENST00000374813 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
HLA-DOA-202ENST00000374813 ARHGEF5Q12774 1597 aa15.09■□□□□ 0.01
HLA-DOA-202ENST00000374813 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
HLA-DOA-202ENST00000374813 EIF2AK4Q9P2K8 1649 aaKnown RBP15.08■□□□□ 0
HLA-DOA-202ENST00000374813 BCANQ96GW7 911 aa15.07■□□□□ 0
HLA-DOA-202ENST00000374813 LRP6O75581 1613 aa15.06■□□□□ 0
HLA-DOA-202ENST00000374813 COL16A1Q07092 1604 aaPredicted RBP15.06■□□□□ 0
HLA-DOA-202ENST00000374813 TET3O43151 1660 aa15.06■□□□□ 0
HLA-DOA-202ENST00000374813 CEP152O94986 1710 aa15.05■□□□□ -0
HLA-DOA-202ENST00000374813 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
HLA-DOA-202ENST00000374813 IDI1Q13907 227 aa15.04■□□□□ -0
HLA-DOA-202ENST00000374813 PIK3C2BO00750 1634 aa15.03■□□□□ -0
HLA-DOA-202ENST00000374813 EFCAB6Q5THR3 1501 aa15.03■□□□□ -0
HLA-DOA-202ENST00000374813 NCOA3Q9Y6Q9 1424 aa15.03■□□□□ -0
HLA-DOA-202ENST00000374813 CADPS2Q86UW7 1296 aa15.03■□□□□ -0
HLA-DOA-202ENST00000374813 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
HLA-DOA-202ENST00000374813 HDGFP51858 240 aaKnown RBP15.02■□□□□ -0
HLA-DOA-202ENST00000374813 C14orf37Q86TY3 774 aa15.02■□□□□ -0
HLA-DOA-202ENST00000374813 MROH1Q8NDA8 1641 aa15.02□□□□□ -0.01
HLA-DOA-202ENST00000374813 NWD1Q149M9 1564 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms