RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 ST18O60284 1047 aa22.44■■□□□ 1.18
COL16A1-203ENST00000373672 TMX4Q9H1E5 349 aaPredicted RBP22.44■■□□□ 1.18
COL16A1-203ENST00000373672 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
COL16A1-203ENST00000373672 PHF14O94880 888 aa22.42■■□□□ 1.18
COL16A1-203ENST00000373672 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
COL16A1-203ENST00000373672 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
COL16A1-203ENST00000373672 NGDNQ8NEJ9 315 aaKnown RBP22.41■■□□□ 1.18
COL16A1-203ENST00000373672 AMPHP49418 695 aa22.41■■□□□ 1.18
COL16A1-203ENST00000373672 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
COL16A1-203ENST00000373672 NOL8Q76FK4 1167 aaKnown RBP22.4■■□□□ 1.18
COL16A1-203ENST00000373672 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
COL16A1-203ENST00000373672 WASHC2CQ9Y4E1 1318 aa22.4■■□□□ 1.18
COL16A1-203ENST00000373672 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
COL16A1-203ENST00000373672 KIF3AQ9Y496 699 aa22.38■■□□□ 1.17
COL16A1-203ENST00000373672 DDX11L8A8MPP1 907 aa22.38■■□□□ 1.17
COL16A1-203ENST00000373672 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
COL16A1-203ENST00000373672 NUTM2DQ5VT03 806 aaPredicted RBP22.37■■□□□ 1.17
COL16A1-203ENST00000373672 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
COL16A1-203ENST00000373672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
COL16A1-203ENST00000373672 RASSF8Q8NHQ8 419 aa22.36■■□□□ 1.17
COL16A1-203ENST00000373672 ARID3AQ99856 593 aa22.35■■□□□ 1.17
COL16A1-203ENST00000373672 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
COL16A1-203ENST00000373672 UACAQ9BZF9 1416 aa22.34■■□□□ 1.17
COL16A1-203ENST00000373672 PANK3Q9H999 370 aa22.33■■□□□ 1.17
COL16A1-203ENST00000373672 GOLGA6L1Q8N7Z2 621 aa22.33■■□□□ 1.16
COL16A1-203ENST00000373672 TRAK1Q9UPV9 953 aa22.33■■□□□ 1.16
COL16A1-203ENST00000373672 FAM161AQ3B820 660 aa22.32■■□□□ 1.16
COL16A1-203ENST00000373672 RRP7AQ9Y3A4 280 aaKnown RBP22.32■■□□□ 1.16
COL16A1-203ENST00000373672 E9PSI1 815 aa22.31■■□□□ 1.16
COL16A1-203ENST00000373672 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
COL16A1-203ENST00000373672 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
COL16A1-203ENST00000373672 AMER1Q5JTC6 1135 aaPredicted RBP22.3■■□□□ 1.16
COL16A1-203ENST00000373672 LTV1Q96GA3 475 aaPredicted RBP22.3■■□□□ 1.16
COL16A1-203ENST00000373672 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
COL16A1-203ENST00000373672 SF3A1Q15459 793 aaKnown RBP22.29■■□□□ 1.16
COL16A1-203ENST00000373672 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
COL16A1-203ENST00000373672 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
COL16A1-203ENST00000373672 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
COL16A1-203ENST00000373672 DHX57Q6P158 1386 aaKnown RBP22.28■■□□□ 1.16
COL16A1-203ENST00000373672 CGNL1Q0VF96 1302 aa22.27■■□□□ 1.16
COL16A1-203ENST00000373672 TPM3P06753 285 aa22.27■■□□□ 1.16
COL16A1-203ENST00000373672 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
COL16A1-203ENST00000373672 FOXD4L5Q5VV16 416 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-203ENST00000373672 FOXD4L4Q8WXT5 416 aaPredicted RBP22.26■■□□□ 1.15
COL16A1-203ENST00000373672 PDE4AP27815 886 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 ANKRD45Q5TZF3 282 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 CREBRFQ8IUR6 639 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 G3V3G9 751 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 DCAF8Q5TAQ9 597 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 H3BQV1 296 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 IFFO2Q5TF58 517 aa22.26■■□□□ 1.15
COL16A1-203ENST00000373672 RILPL2Q969X0 211 aa22.25■■□□□ 1.15
COL16A1-203ENST00000373672 SKOR2Q2VWA4 1001 aaPredicted RBP22.25■■□□□ 1.15
COL16A1-203ENST00000373672 ATP6V1DQ9Y5K8 247 aa22.25■■□□□ 1.15
COL16A1-203ENST00000373672 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
COL16A1-203ENST00000373672 A0A0U1RQG5 324 aaPredicted RBP22.24■■□□□ 1.15
COL16A1-203ENST00000373672 COG3Q96JB2 828 aa22.24■■□□□ 1.15
COL16A1-203ENST00000373672 EVC2Q86UK5 1308 aa22.24■■□□□ 1.15
COL16A1-203ENST00000373672 FRAT2O75474 233 aaPredicted RBP22.23■■□□□ 1.15
COL16A1-203ENST00000373672 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
COL16A1-203ENST00000373672 TNNT3P45378 269 aaPredicted RBP22.22■■□□□ 1.15
COL16A1-203ENST00000373672 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
COL16A1-203ENST00000373672 WIZO95785 1651 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 FAM184AQ8NB25 1140 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 CRBNQ96SW2 442 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 USP47Q96K76 1375 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
COL16A1-203ENST00000373672 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.15
COL16A1-203ENST00000373672 NUTM2FA1L443 756 aa22.2■■□□□ 1.14
COL16A1-203ENST00000373672 PLIN1O60240 522 aa22.2■■□□□ 1.14
COL16A1-203ENST00000373672 MARCH6O60337 910 aa22.2■■□□□ 1.14
COL16A1-203ENST00000373672 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
COL16A1-203ENST00000373672 GTF2E1P29083 439 aaPredicted RBP22.2■■□□□ 1.14
COL16A1-203ENST00000373672 VGFO15240 615 aaPredicted RBP22.19■■□□□ 1.14
COL16A1-203ENST00000373672 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
COL16A1-203ENST00000373672 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
COL16A1-203ENST00000373672 CEP89Q96ST8 783 aa22.17■■□□□ 1.14
COL16A1-203ENST00000373672 TPD52L1Q16890 204 aaPredicted RBP22.17■■□□□ 1.14
COL16A1-203ENST00000373672 GOLGA6L19H0YKK7 550 aa22.16■■□□□ 1.14
COL16A1-203ENST00000373672 DIAPH3Q9NSV4 1193 aa22.16■■□□□ 1.14
COL16A1-203ENST00000373672 COG6Q9Y2V7 657 aa22.15■■□□□ 1.14
COL16A1-203ENST00000373672 DDX19BQ9UMR2 479 aa22.15■■□□□ 1.14
COL16A1-203ENST00000373672 LRRFIP1Q32MZ4 808 aaKnown RBP22.15■■□□□ 1.14
COL16A1-203ENST00000373672 AKAP17AQ02040 695 aaKnown RBP22.14■■□□□ 1.14
COL16A1-203ENST00000373672 VPS53Q5VIR6 699 aa22.14■■□□□ 1.14
COL16A1-203ENST00000373672 RUFY2Q8WXA3 655 aa22.14■■□□□ 1.14
COL16A1-203ENST00000373672 GSE1Q14687 1217 aa22.14■■□□□ 1.13
COL16A1-203ENST00000373672 TSR1Q2NL82 804 aaKnown RBP22.13■■□□□ 1.13
COL16A1-203ENST00000373672 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
COL16A1-203ENST00000373672 REC8O95072 547 aa22.13■■□□□ 1.13
COL16A1-203ENST00000373672 BECN2A8MW95 431 aa22.13■■□□□ 1.13
COL16A1-203ENST00000373672 SLC4A3P48751 1232 aa22.13■■□□□ 1.13
COL16A1-203ENST00000373672 PDE4CQ08493 712 aa22.12■■□□□ 1.13
COL16A1-203ENST00000373672 PES1O00541 588 aaKnown RBP22.12■■□□□ 1.13
COL16A1-203ENST00000373672 TEFQ10587 303 aa22.12■■□□□ 1.13
COL16A1-203ENST00000373672 SYNE3Q6ZMZ3 975 aa22.12■■□□□ 1.13
COL16A1-203ENST00000373672 NEXNQ0ZGT2 675 aa22.11■■□□□ 1.13
COL16A1-203ENST00000373672 TPM2P07951 284 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms