RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 RNF17Q9BXT8 1623 aaKnown RBP38.31■■■■□ 3.72
C9orf50-201ENST00000372478 CLTCQ00610 1675 aaKnown RBP38.31■■■■□ 3.72
C9orf50-201ENST00000372478 ROCK1Q13464 1354 aa38.31■■■■□ 3.72
C9orf50-201ENST00000372478 CNTLNQ9NXG0 1405 aa38.25■■■■□ 3.71
C9orf50-201ENST00000372478 MROH1Q8NDA8 1641 aa38.24■■■■□ 3.71
C9orf50-201ENST00000372478 CEBPAP49715 358 aaPredicted RBP38.23■■■■□ 3.71
C9orf50-201ENST00000372478 ANKRD50Q9ULJ7 1429 aa38.23■■■■□ 3.71
C9orf50-201ENST00000372478 C3P01024 1663 aa38.23■■■■□ 3.71
C9orf50-201ENST00000372478 PPP6R1Q9UPN7 881 aa38.22■■■■□ 3.71
C9orf50-201ENST00000372478 MROH2AA6NES4 1674 aa38.22■■■■□ 3.71
C9orf50-201ENST00000372478 KDM5DQ9BY66 1539 aa38.19■■■■□ 3.7
C9orf50-201ENST00000372478 DEPDC5O75140 1603 aa38.18■■■■□ 3.7
C9orf50-201ENST00000372478 WASHC2CQ9Y4E1 1318 aa38.17■■■■□ 3.7
C9orf50-201ENST00000372478 ZMYM3Q14202 1370 aa38.15■■■■□ 3.7
C9orf50-201ENST00000372478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.15■■■■□ 3.7
C9orf50-201ENST00000372478 PRDM15P57071 1507 aaPredicted RBP38.15■■■■□ 3.7
C9orf50-201ENST00000372478 FAM135AQ9P2D6 1515 aa38.14■■■■□ 3.7
C9orf50-201ENST00000372478 CEP152O94986 1710 aa38.12■■■■□ 3.69
C9orf50-201ENST00000372478 ABCC3O15438 1527 aa38.11■■■■□ 3.69
C9orf50-201ENST00000372478 ZC3H13Q5T200 1668 aaKnown RBP38.1■■■■□ 3.69
C9orf50-201ENST00000372478 GCC2Q8IWJ2 1684 aa38.08■■■■□ 3.69
C9orf50-201ENST00000372478 NAIPQ13075 1403 aa38.06■■■■□ 3.68
C9orf50-201ENST00000372478 KANK1Q14678 1352 aa38.03■■■■□ 3.68
C9orf50-201ENST00000372478 HFM1A2PYH4 1435 aa38.01■■■■□ 3.68
C9orf50-201ENST00000372478 UNC13BO14795 1591 aa38.01■■■■□ 3.68
C9orf50-201ENST00000372478 CAMSAP1Q5T5Y3 1602 aa38.01■■■■□ 3.68
C9orf50-201ENST00000372478 VWDEQ8N2E2 1590 aa38.01■■■■□ 3.68
C9orf50-201ENST00000372478 PZPP20742 1482 aa37.96■■■■□ 3.67
C9orf50-201ENST00000372478 SETD1BQ9UPS6 1966 aaKnown RBP37.95■■■■□ 3.67
C9orf50-201ENST00000372478 PREX1Q8TCU6 1659 aa37.94■■■■□ 3.66
C9orf50-201ENST00000372478 NPATQ14207 1427 aa37.94■■■■□ 3.66
C9orf50-201ENST00000372478 FBXO31Q5XUX0 539 aaPredicted RBP37.93■■■■□ 3.66
C9orf50-201ENST00000372478 CFAP65Q6ZU64 1925 aaKnown RBP37.92■■■■□ 3.66
C9orf50-201ENST00000372478 LMTK2Q8IWU2 1503 aa37.91■■■■□ 3.66
C9orf50-201ENST00000372478 LMTK3Q96Q04 1460 aa37.89■■■■□ 3.66
C9orf50-201ENST00000372478 NUP155O75694 1391 aa37.86■■■■□ 3.65
C9orf50-201ENST00000372478 IQGAP3Q86VI3 1631 aa37.86■■■■□ 3.65
C9orf50-201ENST00000372478 UHRF1BP1Q6BDS2 1440 aa37.84■■■■□ 3.65
C9orf50-201ENST00000372478 EFCAB6Q5THR3 1501 aa37.84■■■■□ 3.65
C9orf50-201ENST00000372478 ARHGAP31Q2M1Z3 1444 aa37.83■■■■□ 3.65
C9orf50-201ENST00000372478 TET3O43151 1660 aa37.83■■■■□ 3.65
C9orf50-201ENST00000372478 MYO3AQ8NEV4 1616 aa37.82■■■■□ 3.64
C9orf50-201ENST00000372478 TNRQ92752 1358 aa37.8■■■■□ 3.64
C9orf50-201ENST00000372478 ERVK-7P63135 1459 aa37.8■■■■□ 3.64
C9orf50-201ENST00000372478 SPATA31D1Q6ZQQ2 1576 aa37.79■■■■□ 3.64
C9orf50-201ENST00000372478 HSPA2P54652 639 aa37.76■■■■□ 3.63
C9orf50-201ENST00000372478 SETD5Q9C0A6 1442 aa37.75■■■■□ 3.63
C9orf50-201ENST00000372478 TRIM52Q96A61 297 aa37.74■■■■□ 3.63
C9orf50-201ENST00000372478 E9PCH4 1651 aa37.72■■■■□ 3.63
C9orf50-201ENST00000372478 ZNF142P52746 1687 aaPredicted RBP37.7■■■■□ 3.63
C9orf50-201ENST00000372478 CEP170BQ9Y4F5 1589 aaPredicted RBP37.7■■■■□ 3.63
C9orf50-201ENST00000372478 RPRD2Q5VT52 1461 aaKnown RBP37.68■■■■□ 3.62
C9orf50-201ENST00000372478 RAB3GAP2Q9H2M9 1393 aa37.64■■■■□ 3.62
C9orf50-201ENST00000372478 A2ML1A8K2U0 1454 aa37.64■■■■□ 3.62
C9orf50-201ENST00000372478 NLRP1Q9C000 1473 aa37.63■■■■□ 3.61
C9orf50-201ENST00000372478 SYNMO15061 1565 aa37.63■■■■□ 3.61
C9orf50-201ENST00000372478 NOS1P29475 1434 aa37.62■■■■□ 3.61
C9orf50-201ENST00000372478 SLC4A1APQ9BWU0 796 aaKnown RBP37.55■■■■□ 3.6
C9orf50-201ENST00000372478 UGGT1Q9NYU2 1555 aa37.53■■■■□ 3.6
C9orf50-201ENST00000372478 PIK3C2BO00750 1634 aa37.52■■■■□ 3.6
C9orf50-201ENST00000372478 TRIM26Q12899 539 aaPredicted RBP37.51■■■■□ 3.6
C9orf50-201ENST00000372478 PKD2Q13563 968 aa37.51■■■■□ 3.6
C9orf50-201ENST00000372478 SPHKAPQ2M3C7 1700 aa37.5■■■■□ 3.59
C9orf50-201ENST00000372478 UBR1Q8IWV7 1749 aa37.49■■■■□ 3.59
C9orf50-201ENST00000372478 IDI1Q13907 227 aa37.49■■■■□ 3.59
C9orf50-201ENST00000372478 STRCQ7RTU9 1775 aa37.48■■■■□ 3.59
C9orf50-201ENST00000372478 MPHOSPH9Q99550 1183 aa37.46■■■■□ 3.59
C9orf50-201ENST00000372478 ACIN1Q9UKV3 1341 aaKnown RBP37.46■■■■□ 3.59
C9orf50-201ENST00000372478 SLC52A1Q9NWF4 448 aa37.44■■■■□ 3.58
C9orf50-201ENST00000372478 THEMISQ8N1K5 641 aaPredicted RBP37.43■■■■□ 3.58
C9orf50-201ENST00000372478 PTPRTO14522 1441 aa37.42■■■■□ 3.58
C9orf50-201ENST00000372478 FOXD1Q16676 465 aa37.41■■■■□ 3.58
C9orf50-201ENST00000372478 PLA2R1Q13018 1463 aa37.4■■■■□ 3.58
C9orf50-201ENST00000372478 STAG3Q9UJ98 1225 aa37.39■■■■□ 3.58
C9orf50-201ENST00000372478 HRCP23327 699 aa37.39■■■■□ 3.58
C9orf50-201ENST00000372478 NCKAP5LQ9HCH0 1330 aa37.37■■■■□ 3.57
C9orf50-201ENST00000372478 ADGRB3O60242 1522 aa37.37■■■■□ 3.57
C9orf50-201ENST00000372478 KDM5AP29375 1690 aaKnown RBP37.37■■■■□ 3.57
C9orf50-201ENST00000372478 MYO5BQ9ULV0 1848 aa37.36■■■■□ 3.57
C9orf50-201ENST00000372478 TRPM2O94759 1503 aa37.36■■■■□ 3.57
C9orf50-201ENST00000372478 POLR1AO95602 1720 aaPredicted RBP37.32■■■■□ 3.57
C9orf50-201ENST00000372478 CLTCL1P53675 1640 aa37.32■■■■□ 3.56
C9orf50-201ENST00000372478 TMEM131LA2VDJ0 1609 aa37.31■■■■□ 3.56
C9orf50-201ENST00000372478 CHGAP10645 457 aaKnown RBP37.3■■■■□ 3.56
C9orf50-201ENST00000372478 ANKLE2Q86XL3 938 aa37.26■■■■□ 3.56
C9orf50-201ENST00000372478 SLIT1O75093 1534 aa37.26■■■■□ 3.56
C9orf50-201ENST00000372478 ARHGAP23Q9P227 1491 aa37.26■■■■□ 3.55
C9orf50-201ENST00000372478 NEURL4Q96JN8 1562 aa37.25■■■■□ 3.55
C9orf50-201ENST00000372478 TMEM2Q9UHN6 1383 aa37.24■■■■□ 3.55
C9orf50-201ENST00000372478 DMRT2Q9Y5R5 561 aa37.23■■■■□ 3.55
C9orf50-201ENST00000372478 KIF1BO60333 1816 aa37.2■■■■□ 3.55
C9orf50-201ENST00000372478 LTKP29376 864 aa37.19■■■■□ 3.54
C9orf50-201ENST00000372478 TXNDC2Q86VQ3 553 aa37.18■■■■□ 3.54
C9orf50-201ENST00000372478 SCAF11Q99590 1463 aaKnown RBP37.18■■■■□ 3.54
C9orf50-201ENST00000372478 EID1Q9Y6B2 187 aa37.15■■■■□ 3.54
C9orf50-201ENST00000372478 CCDC144AA2RUR9 1427 aa37.14■■■■□ 3.54
C9orf50-201ENST00000372478 NPHP4O75161 1426 aaPredicted RBP37.13■■■■□ 3.53
C9orf50-201ENST00000372478 MED14O60244 1454 aa37.13■■■■□ 3.53
C9orf50-201ENST00000372478 RIMS2Q9UQ26 1411 aa37.12■■■■□ 3.53
C9orf50-201ENST00000372478 IQGAP1P46940 1657 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms