RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KIF3BO15066 747 aa23.52■■□□□ 1.36
TMEM53-204ENST00000372243 KDM5DQ9BY66 1539 aa23.51■■□□□ 1.35
TMEM53-204ENST00000372243 SIGLEC1Q9BZZ2 1709 aa23.49■■□□□ 1.35
TMEM53-204ENST00000372243 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
TMEM53-204ENST00000372243 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
TMEM53-204ENST00000372243 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
TMEM53-204ENST00000372243 NUP155O75694 1391 aa23.46■■□□□ 1.35
TMEM53-204ENST00000372243 IQGAP3Q86VI3 1631 aa23.45■■□□□ 1.34
TMEM53-204ENST00000372243 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
TMEM53-204ENST00000372243 KANK1Q14678 1352 aa23.43■■□□□ 1.34
TMEM53-204ENST00000372243 PZPP20742 1482 aa23.42■■□□□ 1.34
TMEM53-204ENST00000372243 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
TMEM53-204ENST00000372243 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
TMEM53-204ENST00000372243 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
TMEM53-204ENST00000372243 GGT6Q6P531 493 aa23.4■■□□□ 1.34
TMEM53-204ENST00000372243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.4■■□□□ 1.34
TMEM53-204ENST00000372243 LMTK2Q8IWU2 1503 aa23.38■■□□□ 1.33
TMEM53-204ENST00000372243 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
TMEM53-204ENST00000372243 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
TMEM53-204ENST00000372243 ARID4BQ4LE39 1312 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-204ENST00000372243 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
TMEM53-204ENST00000372243 TET3O43151 1660 aa23.35■■□□□ 1.33
TMEM53-204ENST00000372243 ABCC3O15438 1527 aa23.34■■□□□ 1.33
TMEM53-204ENST00000372243 CEP152O94986 1710 aa23.33■■□□□ 1.33
TMEM53-204ENST00000372243 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
TMEM53-204ENST00000372243 MLECQ14165 292 aa23.29■■□□□ 1.32
TMEM53-204ENST00000372243 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
TMEM53-204ENST00000372243 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
TMEM53-204ENST00000372243 PKD2Q13563 968 aa23.28■■□□□ 1.32
TMEM53-204ENST00000372243 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-204ENST00000372243 CAMSAP1Q5T5Y3 1602 aa23.28■■□□□ 1.32
TMEM53-204ENST00000372243 E9PCH4 1651 aa23.27■■□□□ 1.32
TMEM53-204ENST00000372243 ARHGAP31Q2M1Z3 1444 aa23.26■■□□□ 1.31
TMEM53-204ENST00000372243 CNTLNQ9NXG0 1405 aa23.26■■□□□ 1.31
TMEM53-204ENST00000372243 CLTCQ00610 1675 aaKnown RBP23.26■■□□□ 1.31
TMEM53-204ENST00000372243 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
TMEM53-204ENST00000372243 ESF1Q9H501 851 aaKnown RBP23.23■■□□□ 1.31
TMEM53-204ENST00000372243 MROH2AA6NES4 1674 aa23.23■■□□□ 1.31
TMEM53-204ENST00000372243 FER1L4A9Z1Z3 1794 aa23.22■■□□□ 1.31
TMEM53-204ENST00000372243 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
TMEM53-204ENST00000372243 NPATQ14207 1427 aa23.21■■□□□ 1.31
TMEM53-204ENST00000372243 ANKRD30BQ9BXX2 1392 aa23.2■■□□□ 1.3
TMEM53-204ENST00000372243 FOXD1Q16676 465 aa23.19■■□□□ 1.3
TMEM53-204ENST00000372243 PTPRTO14522 1441 aa23.18■■□□□ 1.3
TMEM53-204ENST00000372243 ZMYM3Q14202 1370 aa23.17■■□□□ 1.3
TMEM53-204ENST00000372243 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
TMEM53-204ENST00000372243 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
TMEM53-204ENST00000372243 PLA2R1Q13018 1463 aa23.14■■□□□ 1.3
TMEM53-204ENST00000372243 TRPM2O94759 1503 aa23.14■■□□□ 1.29
TMEM53-204ENST00000372243 NOS1P29475 1434 aa23.13■■□□□ 1.29
TMEM53-204ENST00000372243 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
TMEM53-204ENST00000372243 RIMS1Q86UR5 1692 aaKnown RBP23.11■■□□□ 1.29
TMEM53-204ENST00000372243 C3P01024 1663 aa23.1■■□□□ 1.29
TMEM53-204ENST00000372243 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
TMEM53-204ENST00000372243 ERVK-7P63135 1459 aa23.09■■□□□ 1.29
TMEM53-204ENST00000372243 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.29
TMEM53-204ENST00000372243 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.28
TMEM53-204ENST00000372243 SYNMO15061 1565 aa23.06■■□□□ 1.28
TMEM53-204ENST00000372243 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
TMEM53-204ENST00000372243 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-204ENST00000372243 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
TMEM53-204ENST00000372243 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
TMEM53-204ENST00000372243 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
TMEM53-204ENST00000372243 PTPRMP28827 1452 aa23■■□□□ 1.27
TMEM53-204ENST00000372243 CEBPAP49715 358 aaPredicted RBP23■■□□□ 1.27
TMEM53-204ENST00000372243 NEURL4Q96JN8 1562 aa23■■□□□ 1.27
TMEM53-204ENST00000372243 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
TMEM53-204ENST00000372243 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
TMEM53-204ENST00000372243 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
TMEM53-204ENST00000372243 TNRQ92752 1358 aa22.98■■□□□ 1.27
TMEM53-204ENST00000372243 KIF1BO60333 1816 aa22.97■■□□□ 1.27
TMEM53-204ENST00000372243 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
TMEM53-204ENST00000372243 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
TMEM53-204ENST00000372243 NLRP1Q9C000 1473 aa22.95■■□□□ 1.26
TMEM53-204ENST00000372243 IDI1Q13907 227 aa22.94■■□□□ 1.26
TMEM53-204ENST00000372243 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
TMEM53-204ENST00000372243 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
TMEM53-204ENST00000372243 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
TMEM53-204ENST00000372243 KDM5AP29375 1690 aaKnown RBP22.91■■□□□ 1.26
TMEM53-204ENST00000372243 SETD1BQ9UPS6 1966 aaKnown RBP22.91■■□□□ 1.26
TMEM53-204ENST00000372243 TMEM131LA2VDJ0 1609 aa22.89■■□□□ 1.26
TMEM53-204ENST00000372243 MYO3AQ8NEV4 1616 aa22.89■■□□□ 1.25
TMEM53-204ENST00000372243 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
TMEM53-204ENST00000372243 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
TMEM53-204ENST00000372243 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
TMEM53-204ENST00000372243 A2ML1A8K2U0 1454 aa22.83■■□□□ 1.25
TMEM53-204ENST00000372243 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.25
TMEM53-204ENST00000372243 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.25
TMEM53-204ENST00000372243 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
TMEM53-204ENST00000372243 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
TMEM53-204ENST00000372243 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.24
TMEM53-204ENST00000372243 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
TMEM53-204ENST00000372243 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
TMEM53-204ENST00000372243 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
TMEM53-204ENST00000372243 IFT172Q9UG01 1749 aa22.81■■□□□ 1.24
TMEM53-204ENST00000372243 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
TMEM53-204ENST00000372243 UHRF1BP1Q6BDS2 1440 aa22.79■■□□□ 1.24
TMEM53-204ENST00000372243 PPLO60437 1756 aa22.78■■□□□ 1.24
TMEM53-204ENST00000372243 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
TMEM53-204ENST00000372243 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms