RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 KANK1Q14678 1352 aa18.68■□□□□ 0.58
LDB3-203ENST00000372056 RAPGEF3O95398 923 aa18.67■□□□□ 0.58
LDB3-203ENST00000372056 BCORL1Q5H9F3 1711 aa18.65■□□□□ 0.58
LDB3-203ENST00000372056 PZPP20742 1482 aa18.64■□□□□ 0.58
LDB3-203ENST00000372056 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
LDB3-203ENST00000372056 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
LDB3-203ENST00000372056 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
LDB3-203ENST00000372056 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
LDB3-203ENST00000372056 PPP1R15AO75807 674 aaPredicted RBP18.63■□□□□ 0.57
LDB3-203ENST00000372056 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
LDB3-203ENST00000372056 FAM135AQ9P2D6 1515 aa18.62■□□□□ 0.57
LDB3-203ENST00000372056 FRMPD1Q5SYB0 1578 aa18.62■□□□□ 0.57
LDB3-203ENST00000372056 ATP10AO60312 1499 aa18.61■□□□□ 0.57
LDB3-203ENST00000372056 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
LDB3-203ENST00000372056 DIP2CQ9Y2E4 1556 aa18.6■□□□□ 0.57
LDB3-203ENST00000372056 KIF3BO15066 747 aa18.6■□□□□ 0.57
LDB3-203ENST00000372056 ABCA6Q8N139 1617 aa18.59■□□□□ 0.57
LDB3-203ENST00000372056 PKD2Q13563 968 aa18.59■□□□□ 0.57
LDB3-203ENST00000372056 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
LDB3-203ENST00000372056 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.57
LDB3-203ENST00000372056 PRDM15P57071 1507 aaPredicted RBP18.58■□□□□ 0.56
LDB3-203ENST00000372056 AGLP35573 1532 aa18.56■□□□□ 0.56
LDB3-203ENST00000372056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
LDB3-203ENST00000372056 VWDEQ8N2E2 1590 aa18.56■□□□□ 0.56
LDB3-203ENST00000372056 FOXD1Q16676 465 aa18.55■□□□□ 0.56
LDB3-203ENST00000372056 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
LDB3-203ENST00000372056 TET3O43151 1660 aa18.53■□□□□ 0.56
LDB3-203ENST00000372056 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.55
LDB3-203ENST00000372056 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.55
LDB3-203ENST00000372056 YEATS2Q9ULM3 1422 aa18.51■□□□□ 0.55
LDB3-203ENST00000372056 COL17A1Q9UMD9 1497 aaPredicted RBP18.5■□□□□ 0.55
LDB3-203ENST00000372056 ZC3H13Q5T200 1668 aaKnown RBP18.49■□□□□ 0.55
LDB3-203ENST00000372056 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
LDB3-203ENST00000372056 WASHC2CQ9Y4E1 1318 aa18.46■□□□□ 0.55
LDB3-203ENST00000372056 GGT6Q6P531 493 aa18.46■□□□□ 0.54
LDB3-203ENST00000372056 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
LDB3-203ENST00000372056 MIER1Q8N108 512 aa18.45■□□□□ 0.54
LDB3-203ENST00000372056 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
LDB3-203ENST00000372056 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
LDB3-203ENST00000372056 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
LDB3-203ENST00000372056 PTPRTO14522 1441 aa18.44■□□□□ 0.54
LDB3-203ENST00000372056 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
LDB3-203ENST00000372056 E9PCH4 1651 aa18.41■□□□□ 0.54
LDB3-203ENST00000372056 ABCC3O15438 1527 aa18.4■□□□□ 0.54
LDB3-203ENST00000372056 TRPM2O94759 1503 aa18.4■□□□□ 0.54
LDB3-203ENST00000372056 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
LDB3-203ENST00000372056 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
LDB3-203ENST00000372056 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
LDB3-203ENST00000372056 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
LDB3-203ENST00000372056 CEP152O94986 1710 aa18.36■□□□□ 0.53
LDB3-203ENST00000372056 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
LDB3-203ENST00000372056 CAMSAP1Q5T5Y3 1602 aa18.35■□□□□ 0.53
LDB3-203ENST00000372056 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
LDB3-203ENST00000372056 NPATQ14207 1427 aa18.33■□□□□ 0.52
LDB3-203ENST00000372056 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
LDB3-203ENST00000372056 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
LDB3-203ENST00000372056 NOS1P29475 1434 aa18.3■□□□□ 0.52
LDB3-203ENST00000372056 NBPF8Q3BBV2 869 aa18.3■□□□□ 0.52
LDB3-203ENST00000372056 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
LDB3-203ENST00000372056 KIF1BO60333 1816 aa18.26■□□□□ 0.51
LDB3-203ENST00000372056 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
LDB3-203ENST00000372056 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
LDB3-203ENST00000372056 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
LDB3-203ENST00000372056 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
LDB3-203ENST00000372056 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
LDB3-203ENST00000372056 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
LDB3-203ENST00000372056 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
LDB3-203ENST00000372056 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
LDB3-203ENST00000372056 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
LDB3-203ENST00000372056 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
LDB3-203ENST00000372056 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
LDB3-203ENST00000372056 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
LDB3-203ENST00000372056 ZMYM3Q14202 1370 aa18.21■□□□□ 0.51
LDB3-203ENST00000372056 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
LDB3-203ENST00000372056 MLECQ14165 292 aa18.2■□□□□ 0.5
LDB3-203ENST00000372056 SPATA31D1Q6ZQQ2 1576 aa18.2■□□□□ 0.5
LDB3-203ENST00000372056 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
LDB3-203ENST00000372056 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
LDB3-203ENST00000372056 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
LDB3-203ENST00000372056 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
LDB3-203ENST00000372056 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
LDB3-203ENST00000372056 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
LDB3-203ENST00000372056 SYNMO15061 1565 aa18.15■□□□□ 0.5
LDB3-203ENST00000372056 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
LDB3-203ENST00000372056 MYOM2P54296 1465 aa18.15■□□□□ 0.5
LDB3-203ENST00000372056 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
LDB3-203ENST00000372056 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
LDB3-203ENST00000372056 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
LDB3-203ENST00000372056 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
LDB3-203ENST00000372056 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
LDB3-203ENST00000372056 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
LDB3-203ENST00000372056 IDI1Q13907 227 aa18.13■□□□□ 0.49
LDB3-203ENST00000372056 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
LDB3-203ENST00000372056 KDM5AP29375 1690 aaKnown RBP18.12■□□□□ 0.49
LDB3-203ENST00000372056 ZFYVE9O95405 1425 aa18.11■□□□□ 0.49
LDB3-203ENST00000372056 USP47Q96K76 1375 aa18.1■□□□□ 0.49
LDB3-203ENST00000372056 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
LDB3-203ENST00000372056 NLRP1Q9C000 1473 aa18.1■□□□□ 0.49
LDB3-203ENST00000372056 TNRQ92752 1358 aa18.1■□□□□ 0.49
LDB3-203ENST00000372056 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms