RNA–Protein interactions for RNA: ENST00000371982.3

SURF4-201, Transcript of surfeit 4, humanhuman

TSL 3

Gene SURF4, Length 553 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-201ENST00000371982 SPATA31D1Q6ZQQ2 1576 aa23.72■■□□□ 1.39
SURF4-201ENST00000371982 FAM135AQ9P2D6 1515 aa23.7■■□□□ 1.38
SURF4-201ENST00000371982 TNRQ92752 1358 aa23.69■■□□□ 1.38
SURF4-201ENST00000371982 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
SURF4-201ENST00000371982 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
SURF4-201ENST00000371982 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
SURF4-201ENST00000371982 CAMSAP2Q08AD1 1489 aa23.67■■□□□ 1.38
SURF4-201ENST00000371982 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
SURF4-201ENST00000371982 FBXO31Q5XUX0 539 aaPredicted RBP23.66■■□□□ 1.38
SURF4-201ENST00000371982 PZPP20742 1482 aa23.66■■□□□ 1.38
SURF4-201ENST00000371982 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
SURF4-201ENST00000371982 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
SURF4-201ENST00000371982 ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
SURF4-201ENST00000371982 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
SURF4-201ENST00000371982 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
SURF4-201ENST00000371982 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
SURF4-201ENST00000371982 NLRP1Q9C000 1473 aa23.58■■□□□ 1.37
SURF4-201ENST00000371982 CPS1P31327 1500 aa23.58■■□□□ 1.36
SURF4-201ENST00000371982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.361e-7■■■□□ 16
SURF4-201ENST00000371982 TOM1O60784 492 aa23.56■■□□□ 1.36
SURF4-201ENST00000371982 SHANK2Q9UPX8 1470 aa23.56■■□□□ 1.36
SURF4-201ENST00000371982 NEURL4Q96JN8 1562 aa23.55■■□□□ 1.36
SURF4-201ENST00000371982 POLR1AO95602 1720 aaPredicted RBP23.54■■□□□ 1.36
SURF4-201ENST00000371982 UGGT1Q9NYU2 1555 aa23.53■■□□□ 1.36
SURF4-201ENST00000371982 LRRC9Q6ZRR7 1453 aa23.52■■□□□ 1.36
SURF4-201ENST00000371982 SCAF1Q9H7N4 1312 aaKnown RBP23.52■■□□□ 1.36
SURF4-201ENST00000371982 VPS8Q8N3P4 1428 aa23.5■■□□□ 1.35
SURF4-201ENST00000371982 MED14O60244 1454 aa23.5■■□□□ 1.35
SURF4-201ENST00000371982 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
SURF4-201ENST00000371982 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
SURF4-201ENST00000371982 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
SURF4-201ENST00000371982 HSPA1LP34931 641 aa23.47■■□□□ 1.35
SURF4-201ENST00000371982 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
SURF4-201ENST00000371982 RNF17Q9BXT8 1623 aaKnown RBP23.47■■□□□ 1.35
SURF4-201ENST00000371982 ABCC3O15438 1527 aa23.46■■□□□ 1.35
SURF4-201ENST00000371982 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
SURF4-201ENST00000371982 ZC3H13Q5T200 1668 aaKnown RBP23.44■■□□□ 1.34
SURF4-201ENST00000371982 MAP3K1Q13233 1512 aa23.43■■□□□ 1.34
SURF4-201ENST00000371982 EIF2AK4Q9P2K8 1649 aaKnown RBP23.43■■□□□ 1.34
SURF4-201ENST00000371982 MYOM3Q5VTT5 1437 aa23.42■■□□□ 1.34
SURF4-201ENST00000371982 ERVK-7P63135 1459 aa23.42■■□□□ 1.34
SURF4-201ENST00000371982 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
SURF4-201ENST00000371982 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
SURF4-201ENST00000371982 DUOX2Q9NRD8 1548 aa23.38■■□□□ 1.33
SURF4-201ENST00000371982 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
SURF4-201ENST00000371982 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SURF4-201ENST00000371982 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
SURF4-201ENST00000371982 LRRC7Q96NW7 1537 aa23.33■■□□□ 1.32
SURF4-201ENST00000371982 ARHGAP31Q2M1Z3 1444 aa23.33■■□□□ 1.32
SURF4-201ENST00000371982 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
SURF4-201ENST00000371982 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
SURF4-201ENST00000371982 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
SURF4-201ENST00000371982 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
SURF4-201ENST00000371982 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
SURF4-201ENST00000371982 SYNMO15061 1565 aa23.29■■□□□ 1.32
SURF4-201ENST00000371982 APLP2Q06481 763 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 ARHGAP23Q9P227 1491 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
SURF4-201ENST00000371982 CEP152O94986 1710 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
SURF4-201ENST00000371982 ABCC5O15440 1437 aa23.27■■□□□ 1.32
SURF4-201ENST00000371982 LTKP29376 864 aa23.27■■□□□ 1.32
SURF4-201ENST00000371982 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
SURF4-201ENST00000371982 SLIT1O75093 1534 aa23.27■■□□□ 1.32
SURF4-201ENST00000371982 KANK1Q14678 1352 aa23.26■■□□□ 1.31
SURF4-201ENST00000371982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
SURF4-201ENST00000371982 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
SURF4-201ENST00000371982 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
SURF4-201ENST00000371982 DAPK1P53355 1430 aa23.22■■□□□ 1.31
SURF4-201ENST00000371982 PTPN23Q9H3S7 1636 aa23.21■■□□□ 1.31
SURF4-201ENST00000371982 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
SURF4-201ENST00000371982 CFAP65Q6ZU64 1925 aaKnown RBP23.2■■□□□ 1.3
SURF4-201ENST00000371982 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
SURF4-201ENST00000371982 CROCC2H7BZ55 1655 aa23.19■■□□□ 1.3
SURF4-201ENST00000371982 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
SURF4-201ENST00000371982 FGD6Q6ZV73 1430 aa23.17■■□□□ 1.3
SURF4-201ENST00000371982 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
SURF4-201ENST00000371982 IDI1Q13907 227 aa23.15■■□□□ 1.3
SURF4-201ENST00000371982 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
SURF4-201ENST00000371982 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
SURF4-201ENST00000371982 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
SURF4-201ENST00000371982 KDM5AP29375 1690 aaKnown RBP23.12■■□□□ 1.29
SURF4-201ENST00000371982 KCNA6P17658 529 aa23.11■■□□□ 1.29
SURF4-201ENST00000371982 FAM135BQ49AJ0 1406 aa23.1■■□□□ 1.29
SURF4-201ENST00000371982 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
SURF4-201ENST00000371982 NOS1P29475 1434 aa23.08■■□□□ 1.29
SURF4-201ENST00000371982 TMEM94Q12767 1356 aa23.08■■□□□ 1.29
SURF4-201ENST00000371982 SLC26A8Q96RN1 970 aa23.06■■□□□ 1.28
SURF4-201ENST00000371982 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
SURF4-201ENST00000371982 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
SURF4-201ENST00000371982 TET3O43151 1660 aa23.04■■□□□ 1.28
SURF4-201ENST00000371982 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
SURF4-201ENST00000371982 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
SURF4-201ENST00000371982 RPRD2Q5VT52 1461 aaKnown RBP23.02■■□□□ 1.28
SURF4-201ENST00000371982 BCANQ96GW7 911 aa23.01■■□□□ 1.27
SURF4-201ENST00000371982 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
SURF4-201ENST00000371982 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
SURF4-201ENST00000371982 RGS17Q9UGC6 210 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms