RNA–Protein interactions for RNA: ENST00000371459.5

SUPT3H-202, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-202ENST00000371459 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
SUPT3H-202ENST00000371459 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
SUPT3H-202ENST00000371459 PCDHGA4Q9Y5G9 962 aa10.16□□□□□ -0.78
SUPT3H-202ENST00000371459 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
SUPT3H-202ENST00000371459 CLCN1P35523 988 aa10.14□□□□□ -0.79
SUPT3H-202ENST00000371459 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
SUPT3H-202ENST00000371459 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
SUPT3H-202ENST00000371459 KDM4FA0A1W2PPD8 638 aa10.13□□□□□ -0.79
SUPT3H-202ENST00000371459 FLIIQ13045 1269 aa10.13□□□□□ -0.79
SUPT3H-202ENST00000371459 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
SUPT3H-202ENST00000371459 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
SUPT3H-202ENST00000371459 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
SUPT3H-202ENST00000371459 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
SUPT3H-202ENST00000371459 PCMTD1Q96MG8 357 aaPredicted RBP10.11□□□□□ -0.79
SUPT3H-202ENST00000371459 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
SUPT3H-202ENST00000371459 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
SUPT3H-202ENST00000371459 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
SUPT3H-202ENST00000371459 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
SUPT3H-202ENST00000371459 ONECUT3O60422 494 aaPredicted RBP10.08□□□□□ -0.8
SUPT3H-202ENST00000371459 FOSBP53539 338 aa10.08□□□□□ -0.8
SUPT3H-202ENST00000371459 OATP04181 439 aa10.06□□□□□ -0.8
SUPT3H-202ENST00000371459 SSTR3P32745 418 aaPredicted RBP10.06□□□□□ -0.8
SUPT3H-202ENST00000371459 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
SUPT3H-202ENST00000371459 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
SUPT3H-202ENST00000371459 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
SUPT3H-202ENST00000371459 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
SUPT3H-202ENST00000371459 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
SUPT3H-202ENST00000371459 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
SUPT3H-202ENST00000371459 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
SUPT3H-202ENST00000371459 FAM161AQ3B820 660 aa10□□□□□ -0.81
SUPT3H-202ENST00000371459 A6NJR5 290 aa10□□□□□ -0.81
SUPT3H-202ENST00000371459 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
SUPT3H-202ENST00000371459 POTEHQ6S545 545 aa9.98□□□□□ -0.81
SUPT3H-202ENST00000371459 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
SUPT3H-202ENST00000371459 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
SUPT3H-202ENST00000371459 C1orf115Q9H7X2 142 aa9.97□□□□□ -0.81
SUPT3H-202ENST00000371459 NUDT7P0C024 238 aa9.97□□□□□ -0.81
SUPT3H-202ENST00000371459 PRSS12P56730 875 aa9.97□□□□□ -0.81
SUPT3H-202ENST00000371459 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.81
SUPT3H-202ENST00000371459 MCM6Q14566 821 aa9.96□□□□□ -0.81
SUPT3H-202ENST00000371459 NLRP7Q8WX94 980 aa9.96□□□□□ -0.81
SUPT3H-202ENST00000371459 RBM46Q8TBY0 533 aaKnown RBP9.95□□□□□ -0.82
SUPT3H-202ENST00000371459 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
SUPT3H-202ENST00000371459 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
SUPT3H-202ENST00000371459 SP7Q8TDD2 431 aaPredicted RBP9.95□□□□□ -0.82
SUPT3H-202ENST00000371459 KHSRPQ92945 711 aaKnown RBP eCLIP9.95□□□□□ -0.828e-7■■■□□ 18.1
SUPT3H-202ENST00000371459 UBTFP17480 764 aaKnown RBP9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 RIMBP2O15034 1052 aa9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.94□□□□□ -0.82
SUPT3H-202ENST00000371459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.92□□□□□ -0.82
SUPT3H-202ENST00000371459 DIXDC1Q155Q3 683 aa9.92□□□□□ -0.82
SUPT3H-202ENST00000371459 CLUAP1Q96AJ1 413 aa9.92□□□□□ -0.82
SUPT3H-202ENST00000371459 POLR3EQ9NVU0 708 aa9.92□□□□□ -0.82
SUPT3H-202ENST00000371459 TRAK2O60296 914 aa9.92□□□□□ -0.82
SUPT3H-202ENST00000371459 APBB1O00213 710 aa9.91□□□□□ -0.82
SUPT3H-202ENST00000371459 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
SUPT3H-202ENST00000371459 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
SUPT3H-202ENST00000371459 TBC1D2Q9BYX2 928 aa9.91□□□□□ -0.82
SUPT3H-202ENST00000371459 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
SUPT3H-202ENST00000371459 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
SUPT3H-202ENST00000371459 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
SUPT3H-202ENST00000371459 EYA1Q99502 592 aa9.89□□□□□ -0.83
SUPT3H-202ENST00000371459 BCL2L12Q9HB09 334 aa9.89□□□□□ -0.83
SUPT3H-202ENST00000371459 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
SUPT3H-202ENST00000371459 ARID3AQ99856 593 aa9.88□□□□□ -0.83
SUPT3H-202ENST00000371459 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
SUPT3H-202ENST00000371459 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
SUPT3H-202ENST00000371459 RCCD1A6NED2 376 aa9.87□□□□□ -0.83
SUPT3H-202ENST00000371459 COL9A1P20849 921 aa9.87□□□□□ -0.83
SUPT3H-202ENST00000371459 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
SUPT3H-202ENST00000371459 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
SUPT3H-202ENST00000371459 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
SUPT3H-202ENST00000371459 TUSC1Q2TAM9 212 aa9.86□□□□□ -0.83
SUPT3H-202ENST00000371459 CD46P15529 392 aa9.85□□□□□ -0.83
SUPT3H-202ENST00000371459 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
SUPT3H-202ENST00000371459 RFC5P40937 340 aa9.84□□□□□ -0.83
SUPT3H-202ENST00000371459 PPP2R2DQ66LE6 453 aa9.84□□□□□ -0.83
SUPT3H-202ENST00000371459 PROSER2Q86WR7 435 aaPredicted RBP9.84□□□□□ -0.83
SUPT3H-202ENST00000371459 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
SUPT3H-202ENST00000371459 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
SUPT3H-202ENST00000371459 SULF1Q8IWU6 871 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 FNBP4Q8N3X1 1017 aaPredicted RBP9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 RAD21O60216 631 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 PTPREP23469 700 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 DNAJB2P25686 324 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 TMEM259Q4ZIN3 620 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 RIC3Q7Z5B4 369 aa9.83□□□□□ -0.84
SUPT3H-202ENST00000371459 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
SUPT3H-202ENST00000371459 POTEB2H3BUK9 544 aa9.82□□□□□ -0.84
SUPT3H-202ENST00000371459 SPTLC1O15269 473 aa9.82□□□□□ -0.84
SUPT3H-202ENST00000371459 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms