RNA–Protein interactions for RNA: ENST00000370850.6

HMGCLL1-203, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-203ENST00000370850 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
HMGCLL1-203ENST00000370850 ANKRD30AQ9BXX3 1397 aa20.85■□□□□ 0.93
HMGCLL1-203ENST00000370850 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
HMGCLL1-203ENST00000370850 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
HMGCLL1-203ENST00000370850 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
HMGCLL1-203ENST00000370850 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
HMGCLL1-203ENST00000370850 ROCK1Q13464 1354 aa20.8■□□□□ 0.92
HMGCLL1-203ENST00000370850 C3P01024 1663 aa20.8■□□□□ 0.92
HMGCLL1-203ENST00000370850 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
HMGCLL1-203ENST00000370850 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
HMGCLL1-203ENST00000370850 KIF3BO15066 747 aa20.79■□□□□ 0.92
HMGCLL1-203ENST00000370850 DEPDC5O75140 1603 aa20.78■□□□□ 0.92
HMGCLL1-203ENST00000370850 MROH1Q8NDA8 1641 aa20.78■□□□□ 0.92
HMGCLL1-203ENST00000370850 ZC3H13Q5T200 1668 aaKnown RBP20.78■□□□□ 0.92
HMGCLL1-203ENST00000370850 GGT6Q6P531 493 aa20.77■□□□□ 0.92
HMGCLL1-203ENST00000370850 ESF1Q9H501 851 aaKnown RBP20.77■□□□□ 0.92
HMGCLL1-203ENST00000370850 RRP7BPQ9NSQ0 103 aa20.77■□□□□ 0.92
HMGCLL1-203ENST00000370850 CHIC2Q9UKJ5 165 aa20.77■□□□□ 0.92
HMGCLL1-203ENST00000370850 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
HMGCLL1-203ENST00000370850 ABCC3O15438 1527 aa20.72■□□□□ 0.91
HMGCLL1-203ENST00000370850 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
HMGCLL1-203ENST00000370850 ANKRD50Q9ULJ7 1429 aa20.71■□□□□ 0.91
HMGCLL1-203ENST00000370850 PREX1Q8TCU6 1659 aa20.7■□□□□ 0.91
HMGCLL1-203ENST00000370850 NPATQ14207 1427 aa20.7■□□□□ 0.9
HMGCLL1-203ENST00000370850 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
HMGCLL1-203ENST00000370850 CEBPAP49715 358 aaPredicted RBP20.67■□□□□ 0.9
HMGCLL1-203ENST00000370850 WASHC2CQ9Y4E1 1318 aa20.67■□□□□ 0.9
HMGCLL1-203ENST00000370850 PZPP20742 1482 aa20.67■□□□□ 0.9
HMGCLL1-203ENST00000370850 LMTK3Q96Q04 1460 aa20.67■□□□□ 0.9
HMGCLL1-203ENST00000370850 CEP152O94986 1710 aa20.67■□□□□ 0.9
HMGCLL1-203ENST00000370850 LMTK2Q8IWU2 1503 aa20.66■□□□□ 0.9
HMGCLL1-203ENST00000370850 UNC13BO14795 1591 aa20.66■□□□□ 0.9
HMGCLL1-203ENST00000370850 CAMSAP1Q5T5Y3 1602 aa20.66■□□□□ 0.9
HMGCLL1-203ENST00000370850 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
HMGCLL1-203ENST00000370850 ITGAEP38570 1179 aa20.65■□□□□ 0.9
HMGCLL1-203ENST00000370850 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
HMGCLL1-203ENST00000370850 KANK1Q14678 1352 aa20.62■□□□□ 0.89
HMGCLL1-203ENST00000370850 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
HMGCLL1-203ENST00000370850 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
HMGCLL1-203ENST00000370850 ARHGAP31Q2M1Z3 1444 aa20.61■□□□□ 0.89
HMGCLL1-203ENST00000370850 MYO3AQ8NEV4 1616 aa20.6■□□□□ 0.89
HMGCLL1-203ENST00000370850 NAIPQ13075 1403 aa20.6■□□□□ 0.89
HMGCLL1-203ENST00000370850 ZNF142P52746 1687 aaPredicted RBP20.59■□□□□ 0.89
HMGCLL1-203ENST00000370850 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
HMGCLL1-203ENST00000370850 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
HMGCLL1-203ENST00000370850 IQGAP3Q86VI3 1631 aa20.56■□□□□ 0.88
HMGCLL1-203ENST00000370850 TET3O43151 1660 aa20.55■□□□□ 0.88
HMGCLL1-203ENST00000370850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMGCLL1-203ENST00000370850 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
HMGCLL1-203ENST00000370850 TNRQ92752 1358 aa20.53■□□□□ 0.88
HMGCLL1-203ENST00000370850 CEP170BQ9Y4F5 1589 aaPredicted RBP20.53■□□□□ 0.88
HMGCLL1-203ENST00000370850 RPRD2Q5VT52 1461 aaKnown RBP20.52■□□□□ 0.88
HMGCLL1-203ENST00000370850 NLRP1Q9C000 1473 aa20.51■□□□□ 0.87
HMGCLL1-203ENST00000370850 FBXO31Q5XUX0 539 aaPredicted RBP20.5■□□□□ 0.87
HMGCLL1-203ENST00000370850 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
HMGCLL1-203ENST00000370850 NUP155O75694 1391 aa20.46■□□□□ 0.87
HMGCLL1-203ENST00000370850 NOS1P29475 1434 aa20.45■□□□□ 0.86
HMGCLL1-203ENST00000370850 E9PCH4 1651 aa20.45■□□□□ 0.86
HMGCLL1-203ENST00000370850 HSPA2P54652 639 aa20.44■□□□□ 0.86
HMGCLL1-203ENST00000370850 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
HMGCLL1-203ENST00000370850 SYNMO15061 1565 aa20.43■□□□□ 0.86
HMGCLL1-203ENST00000370850 KDM5AP29375 1690 aaKnown RBP20.42■□□□□ 0.86
HMGCLL1-203ENST00000370850 STRCQ7RTU9 1775 aa20.41■□□□□ 0.86
HMGCLL1-203ENST00000370850 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
HMGCLL1-203ENST00000370850 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
HMGCLL1-203ENST00000370850 ACIN1Q9UKV3 1341 aaKnown RBP20.39■□□□□ 0.85
HMGCLL1-203ENST00000370850 UBR1Q8IWV7 1749 aa20.39■□□□□ 0.85
HMGCLL1-203ENST00000370850 SETD5Q9C0A6 1442 aa20.38■□□□□ 0.85
HMGCLL1-203ENST00000370850 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
HMGCLL1-203ENST00000370850 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
HMGCLL1-203ENST00000370850 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.85
HMGCLL1-203ENST00000370850 ADGRB3O60242 1522 aa20.33■□□□□ 0.85
HMGCLL1-203ENST00000370850 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.85
HMGCLL1-203ENST00000370850 PTPRTO14522 1441 aa20.33■□□□□ 0.84
HMGCLL1-203ENST00000370850 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
HMGCLL1-203ENST00000370850 SLIT1O75093 1534 aa20.31■□□□□ 0.84
HMGCLL1-203ENST00000370850 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
HMGCLL1-203ENST00000370850 PKD2Q13563 968 aa20.3■□□□□ 0.84
HMGCLL1-203ENST00000370850 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
HMGCLL1-203ENST00000370850 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
HMGCLL1-203ENST00000370850 TRPM2O94759 1503 aa20.3■□□□□ 0.84
HMGCLL1-203ENST00000370850 ARHGAP23Q9P227 1491 aa20.3■□□□□ 0.84
HMGCLL1-203ENST00000370850 IDI1Q13907 227 aa20.29■□□□□ 0.84
HMGCLL1-203ENST00000370850 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
HMGCLL1-203ENST00000370850 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.83
HMGCLL1-203ENST00000370850 MED14O60244 1454 aa20.26■□□□□ 0.83
HMGCLL1-203ENST00000370850 HRCP23327 699 aa20.26■□□□□ 0.83
HMGCLL1-203ENST00000370850 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
HMGCLL1-203ENST00000370850 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
HMGCLL1-203ENST00000370850 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
HMGCLL1-203ENST00000370850 ANKLE2Q86XL3 938 aa20.23■□□□□ 0.83
HMGCLL1-203ENST00000370850 CLTCL1P53675 1640 aa20.22■□□□□ 0.83
HMGCLL1-203ENST00000370850 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-203ENST00000370850 MYO5BQ9ULV0 1848 aa20.22■□□□□ 0.83
HMGCLL1-203ENST00000370850 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
HMGCLL1-203ENST00000370850 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
HMGCLL1-203ENST00000370850 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
HMGCLL1-203ENST00000370850 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
HMGCLL1-203ENST00000370850 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
HMGCLL1-203ENST00000370850 KIF1BO60333 1816 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms