RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 KDM5DQ9BY66 1539 aa25.04■■□□□ 1.6
SSR4-204ENST00000370087 DHX29Q7Z478 1369 aaKnown RBP25.04■■□□□ 1.6
SSR4-204ENST00000370087 FBXO31Q5XUX0 539 aaPredicted RBP25.03■■□□□ 1.6
SSR4-204ENST00000370087 TNRQ92752 1358 aa25.03■■□□□ 1.6
SSR4-204ENST00000370087 PZPP20742 1482 aa25.02■■□□□ 1.6
SSR4-204ENST00000370087 VWDEQ8N2E2 1590 aa25.01■■□□□ 1.59
SSR4-204ENST00000370087 CEP162Q5TB80 1403 aa25.01■■□□□ 1.59
SSR4-204ENST00000370087 CPS1P31327 1500 aa25.01■■□□□ 1.59
SSR4-204ENST00000370087 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
SSR4-204ENST00000370087 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
SSR4-204ENST00000370087 HSPA1LP34931 641 aa24.99■■□□□ 1.59
SSR4-204ENST00000370087 CAMSAP2Q08AD1 1489 aa24.99■■□□□ 1.59
SSR4-204ENST00000370087 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
SSR4-204ENST00000370087 FAM135AQ9P2D6 1515 aa24.98■■□□□ 1.59
SSR4-204ENST00000370087 KIF3BO15066 747 aa24.96■■□□□ 1.59
SSR4-204ENST00000370087 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
SSR4-204ENST00000370087 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
SSR4-204ENST00000370087 STRCP1A6NGW2 1772 aa24.95■■□□□ 1.58
SSR4-204ENST00000370087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.586e-8■■□□□ 11.8
SSR4-204ENST00000370087 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
SSR4-204ENST00000370087 DEPDC5O75140 1603 aa24.94■■□□□ 1.58
SSR4-204ENST00000370087 UGGT1Q9NYU2 1555 aa24.92■■□□□ 1.58
SSR4-204ENST00000370087 IQGAP1P46940 1657 aa24.91■■□□□ 1.58
SSR4-204ENST00000370087 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
SSR4-204ENST00000370087 MED14O60244 1454 aa24.89■■□□□ 1.58
SSR4-204ENST00000370087 NLRP1Q9C000 1473 aa24.89■■□□□ 1.58
SSR4-204ENST00000370087 ARHGEF5Q12774 1597 aa24.89■■□□□ 1.58
SSR4-204ENST00000370087 MIA2Q96PC5 1412 aa24.89■■□□□ 1.58
SSR4-204ENST00000370087 NPHP4O75161 1426 aaPredicted RBP24.88■■□□□ 1.57
SSR4-204ENST00000370087 WASHC2CQ9Y4E1 1318 aa24.87■■□□□ 1.57
SSR4-204ENST00000370087 TOM1O60784 492 aa24.86■■□□□ 1.57
SSR4-204ENST00000370087 ABCC3O15438 1527 aa24.86■■□□□ 1.57
SSR4-204ENST00000370087 ANKLE2Q86XL3 938 aa24.85■■□□□ 1.57
SSR4-204ENST00000370087 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
SSR4-204ENST00000370087 MROH1Q8NDA8 1641 aa24.84■■□□□ 1.57
SSR4-204ENST00000370087 CEP152O94986 1710 aa24.82■■□□□ 1.56
SSR4-204ENST00000370087 THEMISQ8N1K5 641 aaPredicted RBP24.81■■□□□ 1.56
SSR4-204ENST00000370087 SYNMO15061 1565 aa24.8■■□□□ 1.56
SSR4-204ENST00000370087 MAST1Q9Y2H9 1570 aa24.8■■□□□ 1.56
SSR4-204ENST00000370087 UBR1Q8IWV7 1749 aa24.8■■□□□ 1.56
SSR4-204ENST00000370087 LRRC7Q96NW7 1537 aa24.8■■□□□ 1.56
SSR4-204ENST00000370087 ERVK-7P63135 1459 aa24.79■■□□□ 1.56
SSR4-204ENST00000370087 EIF2AK4Q9P2K8 1649 aaKnown RBP24.79■■□□□ 1.56
SSR4-204ENST00000370087 CFAP65Q6ZU64 1925 aaKnown RBP24.76■■□□□ 1.55
SSR4-204ENST00000370087 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
SSR4-204ENST00000370087 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
SSR4-204ENST00000370087 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
SSR4-204ENST00000370087 LRRC9Q6ZRR7 1453 aa24.7■■□□□ 1.55
SSR4-204ENST00000370087 TSPY4P0CV99 314 aa24.7■■□□□ 1.54
SSR4-204ENST00000370087 TSPY10P0CW01 314 aa24.7■■□□□ 1.54
SSR4-204ENST00000370087 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
SSR4-204ENST00000370087 SCAF11Q99590 1463 aaKnown RBP24.66■■□□□ 1.54
SSR4-204ENST00000370087 ARHGAP23Q9P227 1491 aa24.65■■□□□ 1.54
SSR4-204ENST00000370087 SLIT1O75093 1534 aa24.64■■□□□ 1.53
SSR4-204ENST00000370087 CROCC2H7BZ55 1655 aa24.63■■□□□ 1.53
SSR4-204ENST00000370087 PRDM15P57071 1507 aaPredicted RBP24.63■■□□□ 1.53
SSR4-204ENST00000370087 DUOX2Q9NRD8 1548 aa24.62■■□□□ 1.53
SSR4-204ENST00000370087 PIK3C2BO00750 1634 aa24.62■■□□□ 1.53
SSR4-204ENST00000370087 LTKP29376 864 aa24.61■■□□□ 1.53
SSR4-204ENST00000370087 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
SSR4-204ENST00000370087 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
SSR4-204ENST00000370087 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
SSR4-204ENST00000370087 RGS17Q9UGC6 210 aaPredicted RBP24.56■■□□□ 1.52
SSR4-204ENST00000370087 ARHGAP31Q2M1Z3 1444 aa24.55■■□□□ 1.52
SSR4-204ENST00000370087 TXNDC2Q86VQ3 553 aa24.53■■□□□ 1.52
SSR4-204ENST00000370087 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
SSR4-204ENST00000370087 KIF15Q9NS87 1388 aa24.52■■□□□ 1.52
SSR4-204ENST00000370087 ABCC5O15440 1437 aa24.5■■□□□ 1.51
SSR4-204ENST00000370087 ERBINQ96RT1 1412 aa24.5■■□□□ 1.51
SSR4-204ENST00000370087 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
SSR4-204ENST00000370087 PTPN23Q9H3S7 1636 aa24.49■■□□□ 1.51
SSR4-204ENST00000370087 TMEM2Q9UHN6 1383 aa24.48■■□□□ 1.51
SSR4-204ENST00000370087 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
SSR4-204ENST00000370087 EFCAB6Q5THR3 1501 aa24.46■■□□□ 1.51
SSR4-204ENST00000370087 RRP7BPQ9NSQ0 103 aa24.45■■□□□ 1.5
SSR4-204ENST00000370087 TET3O43151 1660 aa24.45■■□□□ 1.5
SSR4-204ENST00000370087 FAM135BQ49AJ0 1406 aa24.44■■□□□ 1.5
SSR4-204ENST00000370087 TMEM94Q12767 1356 aa24.43■■□□□ 1.5
SSR4-204ENST00000370087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.5
SSR4-204ENST00000370087 LMTK2Q8IWU2 1503 aa24.42■■□□□ 1.5
SSR4-204ENST00000370087 EID1Q9Y6B2 187 aa24.42■■□□□ 1.5
SSR4-204ENST00000370087 DAPK1P53355 1430 aa24.42■■□□□ 1.5
SSR4-204ENST00000370087 NWD1Q149M9 1564 aa24.42■■□□□ 1.5
SSR4-204ENST00000370087 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
SSR4-204ENST00000370087 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
SSR4-204ENST00000370087 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
SSR4-204ENST00000370087 SETD1AO15047 1707 aaKnown RBP24.39■■□□□ 1.5
SSR4-204ENST00000370087 POTEAQ6S8J7 498 aa24.39■■□□□ 1.49
SSR4-204ENST00000370087 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
SSR4-204ENST00000370087 IDI1Q13907 227 aa24.37■■□□□ 1.49
SSR4-204ENST00000370087 SLC26A8Q96RN1 970 aa24.36■■□□□ 1.49
SSR4-204ENST00000370087 NOS1P29475 1434 aa24.35■■□□□ 1.49
SSR4-204ENST00000370087 NKTRP30414 1462 aaKnown RBP24.34■■□□□ 1.49
SSR4-204ENST00000370087 KANK1Q14678 1352 aa24.34■■□□□ 1.49
SSR4-204ENST00000370087 KCNA6P17658 529 aa24.34■■□□□ 1.49
SSR4-204ENST00000370087 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
SSR4-204ENST00000370087 PHLPP1O60346 1717 aa24.33■■□□□ 1.49
SSR4-204ENST00000370087 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
SSR4-204ENST00000370087 PROSER2Q86WR7 435 aaPredicted RBP24.31■■□□□ 1.48
SSR4-204ENST00000370087 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms