RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 NPATQ14207 1427 aa22.42■■□□□ 1.18
SSR4-203ENST00000370086 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
SSR4-203ENST00000370086 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
SSR4-203ENST00000370086 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
SSR4-203ENST00000370086 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
SSR4-203ENST00000370086 KIF15Q9NS87 1388 aa22.39■■□□□ 1.18
SSR4-203ENST00000370086 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.18
SSR4-203ENST00000370086 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
SSR4-203ENST00000370086 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.17
SSR4-203ENST00000370086 STRCQ7RTU9 1775 aa22.38■■□□□ 1.17
SSR4-203ENST00000370086 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
SSR4-203ENST00000370086 WASHC2CQ9Y4E1 1318 aa22.36■■□□□ 1.17
SSR4-203ENST00000370086 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
SSR4-203ENST00000370086 CEP152O94986 1710 aa22.35■■□□□ 1.17
SSR4-203ENST00000370086 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
SSR4-203ENST00000370086 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
SSR4-203ENST00000370086 ZNF142P52746 1687 aaPredicted RBP22.34■■□□□ 1.17
SSR4-203ENST00000370086 NCOA1Q15788 1441 aa22.33■■□□□ 1.17
SSR4-203ENST00000370086 ABCC3O15438 1527 aa22.33■■□□□ 1.17
SSR4-203ENST00000370086 ANKRD30AQ9BXX3 1397 aa22.33■■□□□ 1.17
SSR4-203ENST00000370086 ADGRL2O95490 1459 aa22.33■■□□□ 1.16
SSR4-203ENST00000370086 PZPP20742 1482 aa22.32■■□□□ 1.16
SSR4-203ENST00000370086 FBXO31Q5XUX0 539 aaPredicted RBP22.31■■□□□ 1.16
SSR4-203ENST00000370086 DEPDC5O75140 1603 aa22.31■■□□□ 1.16
SSR4-203ENST00000370086 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
SSR4-203ENST00000370086 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
SSR4-203ENST00000370086 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
SSR4-203ENST00000370086 CFAP65Q6ZU64 1925 aaKnown RBP22.28■■□□□ 1.16
SSR4-203ENST00000370086 TNRQ92752 1358 aa22.25■■□□□ 1.15
SSR4-203ENST00000370086 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
SSR4-203ENST00000370086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.15
SSR4-203ENST00000370086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.22■■□□□ 1.156e-8■■□□□ 11.8
SSR4-203ENST00000370086 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
SSR4-203ENST00000370086 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
SSR4-203ENST00000370086 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
SSR4-203ENST00000370086 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
SSR4-203ENST00000370086 ERVK-7P63135 1459 aa22.19■■□□□ 1.14
SSR4-203ENST00000370086 PTPRTO14522 1441 aa22.17■■□□□ 1.14
SSR4-203ENST00000370086 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
SSR4-203ENST00000370086 KANK1Q14678 1352 aa22.17■■□□□ 1.14
SSR4-203ENST00000370086 ITGAEP38570 1179 aa22.17■■□□□ 1.14
SSR4-203ENST00000370086 PLA2R1Q13018 1463 aa22.16■■□□□ 1.14
SSR4-203ENST00000370086 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
SSR4-203ENST00000370086 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
SSR4-203ENST00000370086 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
SSR4-203ENST00000370086 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
SSR4-203ENST00000370086 NLRP1Q9C000 1473 aa22.15■■□□□ 1.14
SSR4-203ENST00000370086 ILDR1Q86SU0 546 aaPredicted RBP22.13■■□□□ 1.13
SSR4-203ENST00000370086 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
SSR4-203ENST00000370086 UNC13BO14795 1591 aa22.12■■□□□ 1.13
SSR4-203ENST00000370086 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
SSR4-203ENST00000370086 PKD2Q13563 968 aa22.1■■□□□ 1.13
SSR4-203ENST00000370086 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
SSR4-203ENST00000370086 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
SSR4-203ENST00000370086 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
SSR4-203ENST00000370086 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
SSR4-203ENST00000370086 TET3O43151 1660 aa22.06■■□□□ 1.12
SSR4-203ENST00000370086 GCC2Q8IWJ2 1684 aa22.05■■□□□ 1.12
SSR4-203ENST00000370086 SYNMO15061 1565 aa22.04■■□□□ 1.12
SSR4-203ENST00000370086 CERKQ8TCT0 537 aa22.04■■□□□ 1.12
SSR4-203ENST00000370086 PIK3C2BO00750 1634 aa22.04■■□□□ 1.12
SSR4-203ENST00000370086 IQGAP3Q86VI3 1631 aa22.02■■□□□ 1.12
SSR4-203ENST00000370086 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
SSR4-203ENST00000370086 NOS1P29475 1434 aa22.01■■□□□ 1.11
SSR4-203ENST00000370086 FBXO41Q8TF61 875 aa22.01■■□□□ 1.11
SSR4-203ENST00000370086 E9PCH4 1651 aa22■■□□□ 1.11
SSR4-203ENST00000370086 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
SSR4-203ENST00000370086 ANKLE2Q86XL3 938 aa21.99■■□□□ 1.11
SSR4-203ENST00000370086 KDM5AP29375 1690 aaKnown RBP21.97■■□□□ 1.11
SSR4-203ENST00000370086 MED14O60244 1454 aa21.96■■□□□ 1.11
SSR4-203ENST00000370086 IDI1Q13907 227 aa21.96■■□□□ 1.11
SSR4-203ENST00000370086 ZNF335Q9H4Z2 1342 aaPredicted RBP21.96■■□□□ 1.11
SSR4-203ENST00000370086 NUP155O75694 1391 aa21.96■■□□□ 1.11
SSR4-203ENST00000370086 NAIPQ13075 1403 aa21.96■■□□□ 1.11
SSR4-203ENST00000370086 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
SSR4-203ENST00000370086 SLIT1O75093 1534 aa21.95■■□□□ 1.1
SSR4-203ENST00000370086 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
SSR4-203ENST00000370086 ARHGAP23Q9P227 1491 aa21.94■■□□□ 1.1
SSR4-203ENST00000370086 MYO5BQ9ULV0 1848 aa21.93■■□□□ 1.1
SSR4-203ENST00000370086 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
SSR4-203ENST00000370086 LTKP29376 864 aa21.9■■□□□ 1.1
SSR4-203ENST00000370086 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
SSR4-203ENST00000370086 SCAF11Q99590 1463 aaKnown RBP21.9■■□□□ 1.1
SSR4-203ENST00000370086 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
SSR4-203ENST00000370086 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
SSR4-203ENST00000370086 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
SSR4-203ENST00000370086 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
SSR4-203ENST00000370086 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
SSR4-203ENST00000370086 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
SSR4-203ENST00000370086 SPHKAPQ2M3C7 1700 aa21.85■■□□□ 1.09
SSR4-203ENST00000370086 STRCP1A6NGW2 1772 aa21.84■■□□□ 1.09
SSR4-203ENST00000370086 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
SSR4-203ENST00000370086 CPS1P31327 1500 aa21.8■■□□□ 1.08
SSR4-203ENST00000370086 TRIM52Q96A61 297 aa21.77■■□□□ 1.08
SSR4-203ENST00000370086 ZFYVE9O95405 1425 aa21.77■■□□□ 1.08
SSR4-203ENST00000370086 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
SSR4-203ENST00000370086 RIMS2Q9UQ26 1411 aa21.74■■□□□ 1.07
SSR4-203ENST00000370086 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
SSR4-203ENST00000370086 TRPM2O94759 1503 aa21.72■■□□□ 1.07
SSR4-203ENST00000370086 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms