RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

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Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
BRCC3-204ENST00000369462 GGT6Q6P531 493 aa16.13■□□□□ 0.17
BRCC3-204ENST00000369462 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
BRCC3-204ENST00000369462 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
BRCC3-204ENST00000369462 EIF2AK4Q9P2K8 1649 aaKnown RBP16.11■□□□□ 0.17
BRCC3-204ENST00000369462 PZPP20742 1482 aa16.09■□□□□ 0.17
BRCC3-204ENST00000369462 UNC13BO14795 1591 aa16.09■□□□□ 0.17
BRCC3-204ENST00000369462 REREQ9P2R6 1566 aa16.08■□□□□ 0.16
BRCC3-204ENST00000369462 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-204ENST00000369462 KANK1Q14678 1352 aa16.07■□□□□ 0.16
BRCC3-204ENST00000369462 FOXD1Q16676 465 aa16.07■□□□□ 0.16
BRCC3-204ENST00000369462 PKD2Q13563 968 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 MLECQ14165 292 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 KDM5DQ9BY66 1539 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 AGLP35573 1532 aa16.06■□□□□ 0.16
BRCC3-204ENST00000369462 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
BRCC3-204ENST00000369462 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
BRCC3-204ENST00000369462 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
BRCC3-204ENST00000369462 BCORL1Q5H9F3 1711 aa16.04■□□□□ 0.16
BRCC3-204ENST00000369462 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-204ENST00000369462 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
BRCC3-204ENST00000369462 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
BRCC3-204ENST00000369462 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.15
BRCC3-204ENST00000369462 VWDEQ8N2E2 1590 aa16.01■□□□□ 0.15
BRCC3-204ENST00000369462 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
BRCC3-204ENST00000369462 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
BRCC3-204ENST00000369462 ABCC3O15438 1527 aa15.97■□□□□ 0.15
BRCC3-204ENST00000369462 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
BRCC3-204ENST00000369462 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
BRCC3-204ENST00000369462 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
BRCC3-204ENST00000369462 CEP152O94986 1710 aa15.96■□□□□ 0.15
BRCC3-204ENST00000369462 LMTK2Q8IWU2 1503 aa15.96■□□□□ 0.15
BRCC3-204ENST00000369462 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
BRCC3-204ENST00000369462 TET3O43151 1660 aa15.95■□□□□ 0.14
BRCC3-204ENST00000369462 EFCAB6Q5THR3 1501 aa15.93■□□□□ 0.14
BRCC3-204ENST00000369462 E9PCH4 1651 aa15.93■□□□□ 0.14
BRCC3-204ENST00000369462 NPATQ14207 1427 aa15.92■□□□□ 0.14
BRCC3-204ENST00000369462 ZC3H13Q5T200 1668 aaKnown RBP15.91■□□□□ 0.14
BRCC3-204ENST00000369462 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
BRCC3-204ENST00000369462 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
BRCC3-204ENST00000369462 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
BRCC3-204ENST00000369462 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
BRCC3-204ENST00000369462 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
BRCC3-204ENST00000369462 RPRD2Q5VT52 1461 aaKnown RBP15.89■□□□□ 0.13
BRCC3-204ENST00000369462 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
BRCC3-204ENST00000369462 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
BRCC3-204ENST00000369462 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
BRCC3-204ENST00000369462 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
BRCC3-204ENST00000369462 PTPRTO14522 1441 aa15.87■□□□□ 0.13
BRCC3-204ENST00000369462 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
BRCC3-204ENST00000369462 SPHKAPQ2M3C7 1700 aa15.84■□□□□ 0.13
BRCC3-204ENST00000369462 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
BRCC3-204ENST00000369462 TRPM2O94759 1503 aa15.83■□□□□ 0.13
BRCC3-204ENST00000369462 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.13
BRCC3-204ENST00000369462 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
BRCC3-204ENST00000369462 NOS1P29475 1434 aa15.83■□□□□ 0.12
BRCC3-204ENST00000369462 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
BRCC3-204ENST00000369462 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
BRCC3-204ENST00000369462 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
BRCC3-204ENST00000369462 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
BRCC3-204ENST00000369462 ERVK-7P63135 1459 aa15.8■□□□□ 0.12
BRCC3-204ENST00000369462 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
BRCC3-204ENST00000369462 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
BRCC3-204ENST00000369462 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
BRCC3-204ENST00000369462 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
BRCC3-204ENST00000369462 IDI1Q13907 227 aa15.79■□□□□ 0.12
BRCC3-204ENST00000369462 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
BRCC3-204ENST00000369462 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
BRCC3-204ENST00000369462 SLC52A1Q9NWF4 448 aa15.78■□□□□ 0.12
BRCC3-204ENST00000369462 SYNMO15061 1565 aa15.78■□□□□ 0.12
BRCC3-204ENST00000369462 CHGAP10645 457 aaKnown RBP15.78■□□□□ 0.12
BRCC3-204ENST00000369462 RIMS1Q86UR5 1692 aaKnown RBP15.77■□□□□ 0.11
BRCC3-204ENST00000369462 SPATA31D1Q6ZQQ2 1576 aa15.77■□□□□ 0.11
BRCC3-204ENST00000369462 C3P01024 1663 aa15.76■□□□□ 0.11
BRCC3-204ENST00000369462 TNRQ92752 1358 aa15.75■□□□□ 0.11
BRCC3-204ENST00000369462 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
BRCC3-204ENST00000369462 PPP1R15AO75807 674 aaPredicted RBP15.74■□□□□ 0.11
BRCC3-204ENST00000369462 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
BRCC3-204ENST00000369462 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
BRCC3-204ENST00000369462 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
BRCC3-204ENST00000369462 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
BRCC3-204ENST00000369462 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
BRCC3-204ENST00000369462 PTPRMP28827 1452 aa15.7■□□□□ 0.1
BRCC3-204ENST00000369462 KIF1BO60333 1816 aa15.7■□□□□ 0.1
BRCC3-204ENST00000369462 KDM4FA0A1W2PPD8 638 aa15.7■□□□□ 0.1
BRCC3-204ENST00000369462 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
BRCC3-204ENST00000369462 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
BRCC3-204ENST00000369462 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
BRCC3-204ENST00000369462 NLRP1Q9C000 1473 aa15.66■□□□□ 0.1
BRCC3-204ENST00000369462 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
BRCC3-204ENST00000369462 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
BRCC3-204ENST00000369462 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
BRCC3-204ENST00000369462 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
BRCC3-204ENST00000369462 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
BRCC3-204ENST00000369462 MYO5BQ9ULV0 1848 aa15.62■□□□□ 0.09
BRCC3-204ENST00000369462 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
BRCC3-204ENST00000369462 ADGRF5Q8IZF2 1346 aa15.61■□□□□ 0.09
BRCC3-204ENST00000369462 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms