RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
SCNM1-202ENST00000368905 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
SCNM1-202ENST00000368905 MCCP23508 829 aa13.54□□□□□ -0.24
SCNM1-202ENST00000368905 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
SCNM1-202ENST00000368905 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
SCNM1-202ENST00000368905 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
SCNM1-202ENST00000368905 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.24
SCNM1-202ENST00000368905 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.25
SCNM1-202ENST00000368905 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
SCNM1-202ENST00000368905 DEKP35659 375 aaKnown RBP13.51□□□□□ -0.25
SCNM1-202ENST00000368905 NUP160Q12769 1436 aa13.5□□□□□ -0.25
SCNM1-202ENST00000368905 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
SCNM1-202ENST00000368905 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
SCNM1-202ENST00000368905 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
SCNM1-202ENST00000368905 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
SCNM1-202ENST00000368905 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
SCNM1-202ENST00000368905 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
SCNM1-202ENST00000368905 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
SCNM1-202ENST00000368905 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
SCNM1-202ENST00000368905 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.25
SCNM1-202ENST00000368905 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
SCNM1-202ENST00000368905 KIAA0556O60303 1618 aa13.46□□□□□ -0.26
SCNM1-202ENST00000368905 WWC1Q8IX03 1113 aa13.46□□□□□ -0.26
SCNM1-202ENST00000368905 GPATCH11Q8N954 259 aa13.46□□□□□ -0.26
SCNM1-202ENST00000368905 SECISBP2LQ93073 1101 aaKnown RBP13.46□□□□□ -0.26
SCNM1-202ENST00000368905 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.26
SCNM1-202ENST00000368905 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
SCNM1-202ENST00000368905 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
SCNM1-202ENST00000368905 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
SCNM1-202ENST00000368905 NEFMP07197 916 aa13.43□□□□□ -0.26
SCNM1-202ENST00000368905 EXOC8Q8IYI6 725 aa13.43□□□□□ -0.26
SCNM1-202ENST00000368905 PTMAP06454 111 aaKnown RBP13.42□□□□□ -0.26
SCNM1-202ENST00000368905 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
SCNM1-202ENST00000368905 UACAQ9BZF9 1416 aa13.42□□□□□ -0.26
SCNM1-202ENST00000368905 DISP1Q96F81 1524 aa13.42□□□□□ -0.26
SCNM1-202ENST00000368905 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
SCNM1-202ENST00000368905 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
SCNM1-202ENST00000368905 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
SCNM1-202ENST00000368905 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
SCNM1-202ENST00000368905 MIER1Q8N108 512 aa13.4□□□□□ -0.26
SCNM1-202ENST00000368905 SLC24A3Q9HC58 644 aa13.4□□□□□ -0.26
SCNM1-202ENST00000368905 RAPGEF6Q8TEU7 1601 aa13.39□□□□□ -0.27
SCNM1-202ENST00000368905 NAIPQ13075 1403 aa13.39□□□□□ -0.27
SCNM1-202ENST00000368905 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
SCNM1-202ENST00000368905 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
SCNM1-202ENST00000368905 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
SCNM1-202ENST00000368905 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
SCNM1-202ENST00000368905 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
SCNM1-202ENST00000368905 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
SCNM1-202ENST00000368905 RGL2O15211 777 aa13.37□□□□□ -0.27
SCNM1-202ENST00000368905 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
SCNM1-202ENST00000368905 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
SCNM1-202ENST00000368905 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
SCNM1-202ENST00000368905 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
SCNM1-202ENST00000368905 NUP153P49790 1475 aaKnown RBP13.35□□□□□ -0.27
SCNM1-202ENST00000368905 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
SCNM1-202ENST00000368905 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
SCNM1-202ENST00000368905 SIN3AQ96ST3 1273 aa13.34□□□□□ -0.27
SCNM1-202ENST00000368905 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
SCNM1-202ENST00000368905 TONSLQ96HA7 1378 aa13.33□□□□□ -0.27
SCNM1-202ENST00000368905 PRG4Q92954 1404 aaPredicted RBP13.32□□□□□ -0.28
SCNM1-202ENST00000368905 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
SCNM1-202ENST00000368905 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
SCNM1-202ENST00000368905 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
SCNM1-202ENST00000368905 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
SCNM1-202ENST00000368905 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
SCNM1-202ENST00000368905 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
SCNM1-202ENST00000368905 TROQ12816 1431 aaPredicted RBP13.31□□□□□ -0.28
SCNM1-202ENST00000368905 KCNG1Q9UIX4 513 aa13.31□□□□□ -0.28
SCNM1-202ENST00000368905 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
SCNM1-202ENST00000368905 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
SCNM1-202ENST00000368905 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
SCNM1-202ENST00000368905 ITSN2Q9NZM3 1697 aa13.3□□□□□ -0.28
SCNM1-202ENST00000368905 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
SCNM1-202ENST00000368905 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
SCNM1-202ENST00000368905 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.28
SCNM1-202ENST00000368905 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.28
SCNM1-202ENST00000368905 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.28
SCNM1-202ENST00000368905 ZC3H15Q8WU90 426 aaKnown RBP13.27□□□□□ -0.28
SCNM1-202ENST00000368905 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.28
SCNM1-202ENST00000368905 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.28
SCNM1-202ENST00000368905 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 ADCY10Q96PN6 1610 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 DAPK1P53355 1430 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 TMTC2Q8N394 836 aa13.27□□□□□ -0.29
SCNM1-202ENST00000368905 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
SCNM1-202ENST00000368905 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
SCNM1-202ENST00000368905 BRD1O95696 1058 aa13.25□□□□□ -0.29
SCNM1-202ENST00000368905 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
SCNM1-202ENST00000368905 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
SCNM1-202ENST00000368905 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
SCNM1-202ENST00000368905 ABCC5O15440 1437 aa13.23□□□□□ -0.29
SCNM1-202ENST00000368905 ABCA8O94911 1581 aa13.23□□□□□ -0.29
SCNM1-202ENST00000368905 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
SCNM1-202ENST00000368905 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
SCNM1-202ENST00000368905 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
SCNM1-202ENST00000368905 FAM193AP78312 1265 aa13.2□□□□□ -0.3
SCNM1-202ENST00000368905 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms