RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
TUBE1-201ENST00000368657 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
TUBE1-201ENST00000368657 ITSN2Q9NZM3 1697 aa17.58■□□□□ 0.4
TUBE1-201ENST00000368657 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
TUBE1-201ENST00000368657 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
TUBE1-201ENST00000368657 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
TUBE1-201ENST00000368657 FAM135AQ9P2D6 1515 aa17.54■□□□□ 0.4
TUBE1-201ENST00000368657 A2MP01023 1474 aa17.54■□□□□ 0.4
TUBE1-201ENST00000368657 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
TUBE1-201ENST00000368657 SAMD9LQ8IVG5 1584 aa17.53■□□□□ 0.4
TUBE1-201ENST00000368657 RXRBP28702 533 aa17.52■□□□□ 0.4
TUBE1-201ENST00000368657 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
TUBE1-201ENST00000368657 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
TUBE1-201ENST00000368657 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
TUBE1-201ENST00000368657 JCADQ9P266 1359 aa17.5■□□□□ 0.39
TUBE1-201ENST00000368657 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
TUBE1-201ENST00000368657 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
TUBE1-201ENST00000368657 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
TUBE1-201ENST00000368657 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
TUBE1-201ENST00000368657 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
TUBE1-201ENST00000368657 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
TUBE1-201ENST00000368657 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
TUBE1-201ENST00000368657 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
TUBE1-201ENST00000368657 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
TUBE1-201ENST00000368657 PZPP20742 1482 aa17.45■□□□□ 0.38
TUBE1-201ENST00000368657 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-201ENST00000368657 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
TUBE1-201ENST00000368657 SPATA31A6Q5VVP1 1343 aa17.44■□□□□ 0.38
TUBE1-201ENST00000368657 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
TUBE1-201ENST00000368657 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
TUBE1-201ENST00000368657 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
TUBE1-201ENST00000368657 KIAA1107Q9UPP5 1409 aa17.39■□□□□ 0.38
TUBE1-201ENST00000368657 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
TUBE1-201ENST00000368657 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
TUBE1-201ENST00000368657 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
TUBE1-201ENST00000368657 ZC3H13Q5T200 1668 aaKnown RBP17.37■□□□□ 0.37
TUBE1-201ENST00000368657 ADGBQ8N7X0 1667 aa17.37■□□□□ 0.37
TUBE1-201ENST00000368657 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
TUBE1-201ENST00000368657 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
TUBE1-201ENST00000368657 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
TUBE1-201ENST00000368657 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
TUBE1-201ENST00000368657 KIF3BO15066 747 aa17.35■□□□□ 0.37
TUBE1-201ENST00000368657 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
TUBE1-201ENST00000368657 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
TUBE1-201ENST00000368657 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
TUBE1-201ENST00000368657 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
TUBE1-201ENST00000368657 PROSER2Q86WR7 435 aaPredicted RBP17.33■□□□□ 0.36
TUBE1-201ENST00000368657 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
TUBE1-201ENST00000368657 LRP6O75581 1613 aa17.32■□□□□ 0.36
TUBE1-201ENST00000368657 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
TUBE1-201ENST00000368657 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
TUBE1-201ENST00000368657 KCNA6P17658 529 aa17.31■□□□□ 0.36
TUBE1-201ENST00000368657 LTKP29376 864 aa17.31■□□□□ 0.36
TUBE1-201ENST00000368657 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
TUBE1-201ENST00000368657 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
TUBE1-201ENST00000368657 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
TUBE1-201ENST00000368657 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
TUBE1-201ENST00000368657 CFDP1Q9UEE9 299 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-201ENST00000368657 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
TUBE1-201ENST00000368657 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
TUBE1-201ENST00000368657 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
TUBE1-201ENST00000368657 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
TUBE1-201ENST00000368657 MSH6P52701 1360 aa17.27■□□□□ 0.35
TUBE1-201ENST00000368657 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
TUBE1-201ENST00000368657 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
TUBE1-201ENST00000368657 EEA1Q15075 1411 aa17.25■□□□□ 0.35
TUBE1-201ENST00000368657 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
TUBE1-201ENST00000368657 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
TUBE1-201ENST00000368657 AFF2P51816 1311 aa17.24■□□□□ 0.35
TUBE1-201ENST00000368657 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
TUBE1-201ENST00000368657 COL16A1Q07092 1604 aaPredicted RBP17.24■□□□□ 0.35
TUBE1-201ENST00000368657 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
TUBE1-201ENST00000368657 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
TUBE1-201ENST00000368657 MAP3K1Q13233 1512 aa17.23■□□□□ 0.35
TUBE1-201ENST00000368657 RNF216Q9NWF9 866 aaPredicted RBP17.23■□□□□ 0.35
TUBE1-201ENST00000368657 ARHGAP23Q9P227 1491 aa17.23■□□□□ 0.35
TUBE1-201ENST00000368657 NGLY1Q96IV0 654 aa17.22■□□□□ 0.35
TUBE1-201ENST00000368657 RGS12O14924 1447 aa17.21■□□□□ 0.35
TUBE1-201ENST00000368657 SLIT1O75093 1534 aa17.21■□□□□ 0.35
TUBE1-201ENST00000368657 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
TUBE1-201ENST00000368657 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
TUBE1-201ENST00000368657 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
TUBE1-201ENST00000368657 ABCC3O15438 1527 aa17.19■□□□□ 0.34
TUBE1-201ENST00000368657 SHPRHQ149N8 1683 aa17.18■□□□□ 0.34
TUBE1-201ENST00000368657 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
TUBE1-201ENST00000368657 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
TUBE1-201ENST00000368657 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
TUBE1-201ENST00000368657 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
TUBE1-201ENST00000368657 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
TUBE1-201ENST00000368657 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
TUBE1-201ENST00000368657 TIAM1Q13009 1591 aa17.14■□□□□ 0.33
TUBE1-201ENST00000368657 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
TUBE1-201ENST00000368657 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
TUBE1-201ENST00000368657 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
TUBE1-201ENST00000368657 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
TUBE1-201ENST00000368657 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
TUBE1-201ENST00000368657 IFFO2Q5TF58 517 aa17.11■□□□□ 0.33
TUBE1-201ENST00000368657 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
TUBE1-201ENST00000368657 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
TUBE1-201ENST00000368657 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms