RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
TPM3-211ENST00000368531 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
TPM3-211ENST00000368531 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
TPM3-211ENST00000368531 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
TPM3-211ENST00000368531 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
TPM3-211ENST00000368531 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
TPM3-211ENST00000368531 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.93
TPM3-211ENST00000368531 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
TPM3-211ENST00000368531 RIMS1Q86UR5 1692 aaKnown RBP20.83■□□□□ 0.92
TPM3-211ENST00000368531 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
TPM3-211ENST00000368531 MROH1Q8NDA8 1641 aa20.8■□□□□ 0.92
TPM3-211ENST00000368531 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
TPM3-211ENST00000368531 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
TPM3-211ENST00000368531 DEPDC5O75140 1603 aa20.78■□□□□ 0.92
TPM3-211ENST00000368531 CEP152O94986 1710 aa20.78■□□□□ 0.92
TPM3-211ENST00000368531 TRIM52Q96A61 297 aa20.77■□□□□ 0.92
TPM3-211ENST00000368531 KANK1Q14678 1352 aa20.76■□□□□ 0.91
TPM3-211ENST00000368531 UNC13BO14795 1591 aa20.76■□□□□ 0.91
TPM3-211ENST00000368531 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
TPM3-211ENST00000368531 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
TPM3-211ENST00000368531 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
TPM3-211ENST00000368531 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
TPM3-211ENST00000368531 NUP155O75694 1391 aa20.73■□□□□ 0.91
TPM3-211ENST00000368531 RAB3GAP2Q9H2M9 1393 aa20.73■□□□□ 0.91
TPM3-211ENST00000368531 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
TPM3-211ENST00000368531 CFAP65Q6ZU64 1925 aaKnown RBP20.72■□□□□ 0.91
TPM3-211ENST00000368531 ABCC3O15438 1527 aa20.72■□□□□ 0.91
TPM3-211ENST00000368531 CNTLNQ9NXG0 1405 aa20.71■□□□□ 0.91
TPM3-211ENST00000368531 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
TPM3-211ENST00000368531 C3P01024 1663 aa20.7■□□□□ 0.91
TPM3-211ENST00000368531 PTPRMP28827 1452 aa20.7■□□□□ 0.9
TPM3-211ENST00000368531 MROH2AA6NES4 1674 aa20.7■□□□□ 0.9
TPM3-211ENST00000368531 ZMYM3Q14202 1370 aa20.7■□□□□ 0.9
TPM3-211ENST00000368531 CAMSAP1Q5T5Y3 1602 aa20.69■□□□□ 0.9
TPM3-211ENST00000368531 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
TPM3-211ENST00000368531 IQGAP3Q86VI3 1631 aa20.67■□□□□ 0.9
TPM3-211ENST00000368531 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
TPM3-211ENST00000368531 TET3O43151 1660 aa20.64■□□□□ 0.89
TPM3-211ENST00000368531 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
TPM3-211ENST00000368531 LMTK2Q8IWU2 1503 aa20.63■□□□□ 0.89
TPM3-211ENST00000368531 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
TPM3-211ENST00000368531 PZPP20742 1482 aa20.61■□□□□ 0.89
TPM3-211ENST00000368531 E9PCH4 1651 aa20.61■□□□□ 0.89
TPM3-211ENST00000368531 EFCAB6Q5THR3 1501 aa20.6■□□□□ 0.89
TPM3-211ENST00000368531 NPATQ14207 1427 aa20.59■□□□□ 0.89
TPM3-211ENST00000368531 HRCP23327 699 aa20.58■□□□□ 0.89
TPM3-211ENST00000368531 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.89
TPM3-211ENST00000368531 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
TPM3-211ENST00000368531 PKD2Q13563 968 aa20.57■□□□□ 0.88
TPM3-211ENST00000368531 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
TPM3-211ENST00000368531 ARHGAP31Q2M1Z3 1444 aa20.56■□□□□ 0.88
TPM3-211ENST00000368531 FOXD1Q16676 465 aa20.56■□□□□ 0.88
TPM3-211ENST00000368531 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
TPM3-211ENST00000368531 SETD1BQ9UPS6 1966 aaKnown RBP20.52■□□□□ 0.88
TPM3-211ENST00000368531 TNRQ92752 1358 aa20.52■□□□□ 0.88
TPM3-211ENST00000368531 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
TPM3-211ENST00000368531 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
TPM3-211ENST00000368531 SPHKAPQ2M3C7 1700 aa20.5■□□□□ 0.87
TPM3-211ENST00000368531 SYNMO15061 1565 aa20.47■□□□□ 0.87
TPM3-211ENST00000368531 MYO3AQ8NEV4 1616 aa20.47■□□□□ 0.87
TPM3-211ENST00000368531 NOS1P29475 1434 aa20.46■□□□□ 0.87
TPM3-211ENST00000368531 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
TPM3-211ENST00000368531 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
TPM3-211ENST00000368531 IDI1Q13907 227 aa20.43■□□□□ 0.86
TPM3-211ENST00000368531 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
TPM3-211ENST00000368531 PTPRTO14522 1441 aa20.41■□□□□ 0.86
TPM3-211ENST00000368531 CEP170BQ9Y4F5 1589 aaPredicted RBP20.41■□□□□ 0.86
TPM3-211ENST00000368531 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
TPM3-211ENST00000368531 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
TPM3-211ENST00000368531 NLRP1Q9C000 1473 aa20.4■□□□□ 0.86
TPM3-211ENST00000368531 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
TPM3-211ENST00000368531 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
TPM3-211ENST00000368531 HSPA2P54652 639 aa20.39■□□□□ 0.85
TPM3-211ENST00000368531 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
TPM3-211ENST00000368531 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
TPM3-211ENST00000368531 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
TPM3-211ENST00000368531 TRPM2O94759 1503 aa20.38■□□□□ 0.85
TPM3-211ENST00000368531 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
TPM3-211ENST00000368531 LMTK3Q96Q04 1460 aa20.38■□□□□ 0.85
TPM3-211ENST00000368531 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
TPM3-211ENST00000368531 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
TPM3-211ENST00000368531 KIF1BO60333 1816 aa20.35■□□□□ 0.85
TPM3-211ENST00000368531 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
TPM3-211ENST00000368531 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
TPM3-211ENST00000368531 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
TPM3-211ENST00000368531 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
TPM3-211ENST00000368531 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
TPM3-211ENST00000368531 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
TPM3-211ENST00000368531 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
TPM3-211ENST00000368531 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
TPM3-211ENST00000368531 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
TPM3-211ENST00000368531 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
TPM3-211ENST00000368531 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
TPM3-211ENST00000368531 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
TPM3-211ENST00000368531 NCKAP5LQ9HCH0 1330 aa20.25■□□□□ 0.83
TPM3-211ENST00000368531 TXNDC2Q86VQ3 553 aa20.23■□□□□ 0.83
TPM3-211ENST00000368531 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
TPM3-211ENST00000368531 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
TPM3-211ENST00000368531 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
TPM3-211ENST00000368531 RIMS2Q9UQ26 1411 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms