RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
SF3B5-201ENST00000367569 TCOF1Q13428 1488 aaKnown RBP22.78■■□□□ 1.24
SF3B5-201ENST00000367569 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
SF3B5-201ENST00000367569 KIF3BO15066 747 aa22.75■■□□□ 1.23
SF3B5-201ENST00000367569 ZNF142P52746 1687 aaPredicted RBP22.73■■□□□ 1.23
SF3B5-201ENST00000367569 NCKAP5LQ9HCH0 1330 aa22.73■■□□□ 1.23
SF3B5-201ENST00000367569 ABCC5O15440 1437 aa22.72■■□□□ 1.23
SF3B5-201ENST00000367569 DAPK1P53355 1430 aa22.72■■□□□ 1.23
SF3B5-201ENST00000367569 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
SF3B5-201ENST00000367569 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
SF3B5-201ENST00000367569 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
SF3B5-201ENST00000367569 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
SF3B5-201ENST00000367569 FAM50AQ14320 339 aaKnown RBP22.7■■□□□ 1.22
SF3B5-201ENST00000367569 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
SF3B5-201ENST00000367569 FBXO31Q5XUX0 539 aaPredicted RBP22.67■■□□□ 1.22
SF3B5-201ENST00000367569 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
SF3B5-201ENST00000367569 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
SF3B5-201ENST00000367569 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
SF3B5-201ENST00000367569 PKD2Q13563 968 aa22.65■■□□□ 1.22
SF3B5-201ENST00000367569 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
SF3B5-201ENST00000367569 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
SF3B5-201ENST00000367569 PZPP20742 1482 aa22.63■■□□□ 1.21
SF3B5-201ENST00000367569 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
SF3B5-201ENST00000367569 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
SF3B5-201ENST00000367569 TNRQ92752 1358 aa22.62■■□□□ 1.21
SF3B5-201ENST00000367569 RNF17Q9BXT8 1623 aaKnown RBP22.61■■□□□ 1.21
SF3B5-201ENST00000367569 CEP152O94986 1710 aa22.61■■□□□ 1.21
SF3B5-201ENST00000367569 ZNF335Q9H4Z2 1342 aaPredicted RBP22.6■■□□□ 1.21
SF3B5-201ENST00000367569 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
SF3B5-201ENST00000367569 KIF15Q9NS87 1388 aa22.6■■□□□ 1.21
SF3B5-201ENST00000367569 MROH1Q8NDA8 1641 aa22.6■■□□□ 1.21
SF3B5-201ENST00000367569 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
SF3B5-201ENST00000367569 IQSEC2Q5JU85 1478 aa22.57■■□□□ 1.2
SF3B5-201ENST00000367569 ITGAEP38570 1179 aa22.54■■□□□ 1.2
SF3B5-201ENST00000367569 ABCC3O15438 1527 aa22.53■■□□□ 1.2
SF3B5-201ENST00000367569 ADGRL2O95490 1459 aa22.53■■□□□ 1.2
SF3B5-201ENST00000367569 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
SF3B5-201ENST00000367569 ANKRD30AQ9BXX3 1397 aa22.51■■□□□ 1.19
SF3B5-201ENST00000367569 POLR1AO95602 1720 aaPredicted RBP22.51■■□□□ 1.19
SF3B5-201ENST00000367569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
SF3B5-201ENST00000367569 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
SF3B5-201ENST00000367569 DEPDC5O75140 1603 aa22.5■■□□□ 1.19
SF3B5-201ENST00000367569 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
SF3B5-201ENST00000367569 NLRP1Q9C000 1473 aa22.49■■□□□ 1.19
SF3B5-201ENST00000367569 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
SF3B5-201ENST00000367569 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
SF3B5-201ENST00000367569 UGGT1Q9NYU2 1555 aa22.47■■□□□ 1.19
SF3B5-201ENST00000367569 RRBP1Q9P2E9 1410 aaKnown RBP22.47■■□□□ 1.19
SF3B5-201ENST00000367569 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
SF3B5-201ENST00000367569 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
SF3B5-201ENST00000367569 CFAP65Q6ZU64 1925 aaKnown RBP22.45■■□□□ 1.18
SF3B5-201ENST00000367569 UBAP1LF5GYI3 381 aa22.44■■□□□ 1.18
SF3B5-201ENST00000367569 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
SF3B5-201ENST00000367569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.182e-9■■□□□ 14.5
SF3B5-201ENST00000367569 DISP3Q9P2K9 1392 aa22.4■■□□□ 1.18
SF3B5-201ENST00000367569 MED14O60244 1454 aa22.4■■□□□ 1.18
SF3B5-201ENST00000367569 NPHP4O75161 1426 aaPredicted RBP22.39■■□□□ 1.17
SF3B5-201ENST00000367569 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.17
SF3B5-201ENST00000367569 UNC13BO14795 1591 aa22.38■■□□□ 1.17
SF3B5-201ENST00000367569 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
SF3B5-201ENST00000367569 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
SF3B5-201ENST00000367569 CPS1P31327 1500 aa22.36■■□□□ 1.17
SF3B5-201ENST00000367569 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
SF3B5-201ENST00000367569 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
SF3B5-201ENST00000367569 ROCK1Q13464 1354 aa22.34■■□□□ 1.17
SF3B5-201ENST00000367569 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
SF3B5-201ENST00000367569 ILDR2Q71H61 639 aa22.32■■□□□ 1.16
SF3B5-201ENST00000367569 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
SF3B5-201ENST00000367569 KANK1Q14678 1352 aa22.3■■□□□ 1.16
SF3B5-201ENST00000367569 TET3O43151 1660 aa22.28■■□□□ 1.16
SF3B5-201ENST00000367569 STRCP1A6NGW2 1772 aa22.27■■□□□ 1.16
SF3B5-201ENST00000367569 LMTK2Q8IWU2 1503 aa22.27■■□□□ 1.16
SF3B5-201ENST00000367569 LTKP29376 864 aa22.27■■□□□ 1.16
SF3B5-201ENST00000367569 PIP4K2BP78356 416 aa22.27■■□□□ 1.16
SF3B5-201ENST00000367569 IQGAP3Q86VI3 1631 aa22.27■■□□□ 1.16
SF3B5-201ENST00000367569 TOM1O60784 492 aa22.26■■□□□ 1.15
SF3B5-201ENST00000367569 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
SF3B5-201ENST00000367569 ARHGAP23Q9P227 1491 aa22.26■■□□□ 1.15
SF3B5-201ENST00000367569 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
SF3B5-201ENST00000367569 TXNDC2Q86VQ3 553 aa22.25■■□□□ 1.15
SF3B5-201ENST00000367569 SLIT1O75093 1534 aa22.25■■□□□ 1.15
SF3B5-201ENST00000367569 PIK3C2BO00750 1634 aa22.24■■□□□ 1.15
SF3B5-201ENST00000367569 E9PCH4 1651 aa22.24■■□□□ 1.15
SF3B5-201ENST00000367569 SYNMO15061 1565 aa22.24■■□□□ 1.15
SF3B5-201ENST00000367569 NAIPQ13075 1403 aa22.23■■□□□ 1.15
SF3B5-201ENST00000367569 HSPA1LP34931 641 aa22.22■■□□□ 1.15
SF3B5-201ENST00000367569 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
SF3B5-201ENST00000367569 ALKQ9UM73 1620 aa22.21■■□□□ 1.15
SF3B5-201ENST00000367569 IDI1Q13907 227 aa22.21■■□□□ 1.15
SF3B5-201ENST00000367569 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
SF3B5-201ENST00000367569 TMEM2Q9UHN6 1383 aa22.19■■□□□ 1.14
SF3B5-201ENST00000367569 EID1Q9Y6B2 187 aa22.18■■□□□ 1.14
SF3B5-201ENST00000367569 NOS1P29475 1434 aa22.17■■□□□ 1.14
SF3B5-201ENST00000367569 HFM1A2PYH4 1435 aa22.16■■□□□ 1.14
SF3B5-201ENST00000367569 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
SF3B5-201ENST00000367569 NUP155O75694 1391 aa22.15■■□□□ 1.14
SF3B5-201ENST00000367569 KDM5AP29375 1690 aaKnown RBP22.15■■□□□ 1.14
SF3B5-201ENST00000367569 SOCS7O14512 581 aa22.13■■□□□ 1.13
SF3B5-201ENST00000367569 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
SF3B5-201ENST00000367569 SLC52A1Q9NWF4 448 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms