RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 NCOA1Q15788 1441 aa30.48■■■□□ 2.47
H3F3A-204ENST00000366816 LMTK3Q96Q04 1460 aa30.46■■■□□ 2.47
H3F3A-204ENST00000366816 WASHC2CQ9Y4E1 1318 aa30.46■■■□□ 2.47
H3F3A-204ENST00000366816 MROH2AA6NES4 1674 aa30.44■■■□□ 2.46
H3F3A-204ENST00000366816 HSPA2P54652 639 aa30.43■■■□□ 2.46
H3F3A-204ENST00000366816 ADGRL2O95490 1459 aa30.42■■■□□ 2.46
H3F3A-204ENST00000366816 EIF2AK4Q9P2K8 1649 aaKnown RBP30.41■■■□□ 2.46
H3F3A-204ENST00000366816 ERBINQ96RT1 1412 aa30.4■■■□□ 2.46
H3F3A-204ENST00000366816 RNF17Q9BXT8 1623 aaKnown RBP30.4■■■□□ 2.46
H3F3A-204ENST00000366816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.4■■■□□ 2.46
H3F3A-204ENST00000366816 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.45
H3F3A-204ENST00000366816 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
H3F3A-204ENST00000366816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.38■■■□□ 2.45
H3F3A-204ENST00000366816 MROH1Q8NDA8 1641 aa30.36■■■□□ 2.45
H3F3A-204ENST00000366816 FBXO31Q5XUX0 539 aaPredicted RBP30.35■■■□□ 2.45
H3F3A-204ENST00000366816 PREX1Q8TCU6 1659 aa30.34■■■□□ 2.45
H3F3A-204ENST00000366816 UHRF1BP1Q6BDS2 1440 aa30.33■■■□□ 2.45
H3F3A-204ENST00000366816 NPATQ14207 1427 aa30.32■■■□□ 2.44
H3F3A-204ENST00000366816 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
H3F3A-204ENST00000366816 ABCC3O15438 1527 aa30.32■■■□□ 2.44
H3F3A-204ENST00000366816 FAM135AQ9P2D6 1515 aa30.3■■■□□ 2.44
H3F3A-204ENST00000366816 ANKRD50Q9ULJ7 1429 aa30.3■■■□□ 2.44
H3F3A-204ENST00000366816 ROCK1Q13464 1354 aa30.28■■■□□ 2.44
H3F3A-204ENST00000366816 PZPP20742 1482 aa30.25■■■□□ 2.43
H3F3A-204ENST00000366816 CEP152O94986 1710 aa30.25■■■□□ 2.43
H3F3A-204ENST00000366816 PRDM15P57071 1507 aaPredicted RBP30.25■■■□□ 2.43
H3F3A-204ENST00000366816 DEPDC5O75140 1603 aa30.24■■■□□ 2.43
H3F3A-204ENST00000366816 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
H3F3A-204ENST00000366816 KANK1Q14678 1352 aa30.22■■■□□ 2.43
H3F3A-204ENST00000366816 TNRQ92752 1358 aa30.19■■■□□ 2.42
H3F3A-204ENST00000366816 CAMSAP1Q5T5Y3 1602 aa30.18■■■□□ 2.42
H3F3A-204ENST00000366816 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
H3F3A-204ENST00000366816 VWDEQ8N2E2 1590 aa30.14■■■□□ 2.42
H3F3A-204ENST00000366816 CFAP65Q6ZU64 1925 aaKnown RBP30.12■■■□□ 2.41
H3F3A-204ENST00000366816 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
H3F3A-204ENST00000366816 CEP170BQ9Y4F5 1589 aaPredicted RBP30.11■■■□□ 2.41
H3F3A-204ENST00000366816 ARHGAP31Q2M1Z3 1444 aa30.1■■■□□ 2.41
H3F3A-204ENST00000366816 LMTK2Q8IWU2 1503 aa30.09■■■□□ 2.41
H3F3A-204ENST00000366816 SPATA31D1Q6ZQQ2 1576 aa30.07■■■□□ 2.4
H3F3A-204ENST00000366816 A2ML1A8K2U0 1454 aa30.07■■■□□ 2.4
H3F3A-204ENST00000366816 ZNF142P52746 1687 aaPredicted RBP30.07■■■□□ 2.4
H3F3A-204ENST00000366816 NAIPQ13075 1403 aa30.06■■■□□ 2.4
H3F3A-204ENST00000366816 UNC13BO14795 1591 aa30.06■■■□□ 2.4
H3F3A-204ENST00000366816 STRCQ7RTU9 1775 aa30.05■■■□□ 2.4
H3F3A-204ENST00000366816 NUP155O75694 1391 aa30.03■■■□□ 2.4
H3F3A-204ENST00000366816 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
H3F3A-204ENST00000366816 EFCAB6Q5THR3 1501 aa30.01■■■□□ 2.4
H3F3A-204ENST00000366816 NLRP1Q9C000 1473 aa30.01■■■□□ 2.4
H3F3A-204ENST00000366816 HFM1A2PYH4 1435 aa29.98■■■□□ 2.39
H3F3A-204ENST00000366816 DMRT2Q9Y5R5 561 aa29.96■■■□□ 2.39
H3F3A-204ENST00000366816 GCC2Q8IWJ2 1684 aa29.95■■■□□ 2.39
H3F3A-204ENST00000366816 UGGT1Q9NYU2 1555 aa29.95■■■□□ 2.39
H3F3A-204ENST00000366816 THEMISQ8N1K5 641 aaPredicted RBP29.95■■■□□ 2.39
H3F3A-204ENST00000366816 TET3O43151 1660 aa29.95■■■□□ 2.38
H3F3A-204ENST00000366816 IQGAP3Q86VI3 1631 aa29.94■■■□□ 2.38
H3F3A-204ENST00000366816 PLA2R1Q13018 1463 aa29.93■■■□□ 2.38
H3F3A-204ENST00000366816 NOS1P29475 1434 aa29.91■■■□□ 2.38
H3F3A-204ENST00000366816 IDI1Q13907 227 aa29.91■■■□□ 2.38
H3F3A-204ENST00000366816 ILDR1Q86SU0 546 aaPredicted RBP29.91■■■□□ 2.38
H3F3A-204ENST00000366816 SYNMO15061 1565 aa29.9■■■□□ 2.38
H3F3A-204ENST00000366816 PKD2Q13563 968 aa29.9■■■□□ 2.38
H3F3A-204ENST00000366816 RPRD2Q5VT52 1461 aaKnown RBP29.89■■■□□ 2.38
H3F3A-204ENST00000366816 TRIM52Q96A61 297 aa29.89■■■□□ 2.38
H3F3A-204ENST00000366816 PTPRTO14522 1441 aa29.88■■■□□ 2.37
H3F3A-204ENST00000366816 E9PCH4 1651 aa29.87■■■□□ 2.37
H3F3A-204ENST00000366816 ANKLE2Q86XL3 938 aa29.85■■■□□ 2.37
H3F3A-204ENST00000366816 STAG3Q9UJ98 1225 aa29.85■■■□□ 2.37
H3F3A-204ENST00000366816 PIK3C2BO00750 1634 aa29.84■■■□□ 2.37
H3F3A-204ENST00000366816 UBR1Q8IWV7 1749 aa29.84■■■□□ 2.37
H3F3A-204ENST00000366816 SLC52A1Q9NWF4 448 aa29.82■■■□□ 2.36
H3F3A-204ENST00000366816 NEURL4Q96JN8 1562 aa29.77■■■□□ 2.36
H3F3A-204ENST00000366816 POLR1AO95602 1720 aaPredicted RBP29.76■■■□□ 2.35
H3F3A-204ENST00000366816 LTKP29376 864 aa29.75■■■□□ 2.35
H3F3A-204ENST00000366816 TXNDC2Q86VQ3 553 aa29.74■■■□□ 2.35
H3F3A-204ENST00000366816 SLC4A1APQ9BWU0 796 aaKnown RBP29.74■■■□□ 2.35
H3F3A-204ENST00000366816 SETD5Q9C0A6 1442 aa29.73■■■□□ 2.35
H3F3A-204ENST00000366816 CHGAP10645 457 aaKnown RBP29.73■■■□□ 2.35
H3F3A-204ENST00000366816 NPHP4O75161 1426 aaPredicted RBP29.71■■■□□ 2.35
H3F3A-204ENST00000366816 TMEM2Q9UHN6 1383 aa29.71■■■□□ 2.35
H3F3A-204ENST00000366816 ARHGAP23Q9P227 1491 aa29.71■■■□□ 2.35
H3F3A-204ENST00000366816 SLIT1O75093 1534 aa29.71■■■□□ 2.35
H3F3A-204ENST00000366816 ZNF335Q9H4Z2 1342 aaPredicted RBP29.71■■■□□ 2.35
H3F3A-204ENST00000366816 ADGRB3O60242 1522 aa29.7■■■□□ 2.34
H3F3A-204ENST00000366816 EID1Q9Y6B2 187 aa29.69■■■□□ 2.34
H3F3A-204ENST00000366816 MED14O60244 1454 aa29.68■■■□□ 2.34
H3F3A-204ENST00000366816 CERKQ8TCT0 537 aa29.68■■■□□ 2.34
H3F3A-204ENST00000366816 SCAF11Q99590 1463 aaKnown RBP29.68■■■□□ 2.34
H3F3A-204ENST00000366816 FOXD1Q16676 465 aa29.67■■■□□ 2.34
H3F3A-204ENST00000366816 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
H3F3A-204ENST00000366816 RAB3GAP2Q9H2M9 1393 aa29.65■■■□□ 2.34
H3F3A-204ENST00000366816 FBXO41Q8TF61 875 aa29.65■■■□□ 2.34
H3F3A-204ENST00000366816 SPHKAPQ2M3C7 1700 aa29.65■■■□□ 2.34
H3F3A-204ENST00000366816 MPHOSPH9Q99550 1183 aa29.64■■■□□ 2.34
H3F3A-204ENST00000366816 TMEM131LA2VDJ0 1609 aa29.63■■■□□ 2.33
H3F3A-204ENST00000366816 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
H3F3A-204ENST00000366816 MYO5BQ9ULV0 1848 aa29.63■■■□□ 2.33
H3F3A-204ENST00000366816 LTBP4Q8N2S1 1624 aa29.63■■■□□ 2.33
H3F3A-204ENST00000366816 IQGAP1P46940 1657 aa29.62■■■□□ 2.33
H3F3A-204ENST00000366816 NUTM2DQ5VT03 806 aaPredicted RBP29.58■■■□□ 2.33
H3F3A-204ENST00000366816 RIMS2Q9UQ26 1411 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms