RNA–Protein interactions for RNA: ENST00000366181.2

LINC01562-201, Transcript of long intergenic non-protein coding RNA 1562, humanhuman

TSL 2 BASIC

Gene LINC01562, Length 2,366 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01562-201ENST00000366181 KIF3BO15066 747 aa16.35■□□□□ 0.21
LINC01562-201ENST00000366181 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
LINC01562-201ENST00000366181 ATP10AO60312 1499 aa16.34■□□□□ 0.21
LINC01562-201ENST00000366181 PZPP20742 1482 aa16.33■□□□□ 0.2
LINC01562-201ENST00000366181 RNF17Q9BXT8 1623 aaKnown RBP16.32■□□□□ 0.2
LINC01562-201ENST00000366181 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
LINC01562-201ENST00000366181 FOXD1Q16676 465 aa16.32■□□□□ 0.2
LINC01562-201ENST00000366181 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
LINC01562-201ENST00000366181 NUP155O75694 1391 aa16.3■□□□□ 0.2
LINC01562-201ENST00000366181 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
LINC01562-201ENST00000366181 GGT6Q6P531 493 aa16.29■□□□□ 0.2
LINC01562-201ENST00000366181 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
LINC01562-201ENST00000366181 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
LINC01562-201ENST00000366181 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
LINC01562-201ENST00000366181 MLECQ14165 292 aa16.29■□□□□ 0.2
LINC01562-201ENST00000366181 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
LINC01562-201ENST00000366181 E9PCH4 1651 aa16.26■□□□□ 0.19
LINC01562-201ENST00000366181 CLTCQ00610 1675 aaKnown RBP16.26■□□□□ 0.19
LINC01562-201ENST00000366181 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
LINC01562-201ENST00000366181 HRCP23327 699 aa16.25■□□□□ 0.19
LINC01562-201ENST00000366181 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
LINC01562-201ENST00000366181 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
LINC01562-201ENST00000366181 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
LINC01562-201ENST00000366181 AGLP35573 1532 aa16.23■□□□□ 0.19
LINC01562-201ENST00000366181 TET3O43151 1660 aa16.23■□□□□ 0.19
LINC01562-201ENST00000366181 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
LINC01562-201ENST00000366181 ABCC3O15438 1527 aa16.22■□□□□ 0.19
LINC01562-201ENST00000366181 PKD2Q13563 968 aa16.21■□□□□ 0.19
LINC01562-201ENST00000366181 FER1L4A9Z1Z3 1794 aa16.2■□□□□ 0.18
LINC01562-201ENST00000366181 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
LINC01562-201ENST00000366181 SPHKAPQ2M3C7 1700 aa16.18■□□□□ 0.18
LINC01562-201ENST00000366181 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
LINC01562-201ENST00000366181 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
LINC01562-201ENST00000366181 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
LINC01562-201ENST00000366181 KANK1Q14678 1352 aa16.16■□□□□ 0.18
LINC01562-201ENST00000366181 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
LINC01562-201ENST00000366181 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.18
LINC01562-201ENST00000366181 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
LINC01562-201ENST00000366181 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 NPATQ14207 1427 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
LINC01562-201ENST00000366181 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
LINC01562-201ENST00000366181 C3P01024 1663 aa16.11■□□□□ 0.17
LINC01562-201ENST00000366181 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
LINC01562-201ENST00000366181 ADAMTSL3P82987 1691 aa16.1■□□□□ 0.17
LINC01562-201ENST00000366181 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
LINC01562-201ENST00000366181 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
LINC01562-201ENST00000366181 SYNMO15061 1565 aa16.08■□□□□ 0.17
LINC01562-201ENST00000366181 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
LINC01562-201ENST00000366181 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
LINC01562-201ENST00000366181 TRPM2O94759 1503 aa16.05■□□□□ 0.16
LINC01562-201ENST00000366181 KIF1BO60333 1816 aa16.05■□□□□ 0.16
LINC01562-201ENST00000366181 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
LINC01562-201ENST00000366181 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
LINC01562-201ENST00000366181 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
LINC01562-201ENST00000366181 PTPRTO14522 1441 aa16.02■□□□□ 0.16
LINC01562-201ENST00000366181 ERVK-7P63135 1459 aa16.02■□□□□ 0.16
LINC01562-201ENST00000366181 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
LINC01562-201ENST00000366181 CCDC144AA2RUR9 1427 aa16.01■□□□□ 0.15
LINC01562-201ENST00000366181 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
LINC01562-201ENST00000366181 PIK3C2BO00750 1634 aa16.01■□□□□ 0.15
LINC01562-201ENST00000366181 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
LINC01562-201ENST00000366181 NOS1P29475 1434 aa16■□□□□ 0.15
LINC01562-201ENST00000366181 SPATA31D1Q6ZQQ2 1576 aa15.99■□□□□ 0.15
LINC01562-201ENST00000366181 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
LINC01562-201ENST00000366181 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
LINC01562-201ENST00000366181 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
LINC01562-201ENST00000366181 RGL3Q3MIN7 710 aa15.97■□□□□ 0.15
LINC01562-201ENST00000366181 CHGAP10645 457 aaKnown RBP15.95■□□□□ 0.14
LINC01562-201ENST00000366181 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
LINC01562-201ENST00000366181 IDI1Q13907 227 aa15.94■□□□□ 0.14
LINC01562-201ENST00000366181 L3MBTL2Q969R5 705 aa15.94■□□□□ 0.14
LINC01562-201ENST00000366181 IFT172Q9UG01 1749 aa15.94■□□□□ 0.14
LINC01562-201ENST00000366181 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
LINC01562-201ENST00000366181 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
LINC01562-201ENST00000366181 PTPRMP28827 1452 aa15.93■□□□□ 0.14
LINC01562-201ENST00000366181 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
LINC01562-201ENST00000366181 SPATA31E1Q6ZUB1 1445 aa15.93■□□□□ 0.14
LINC01562-201ENST00000366181 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
LINC01562-201ENST00000366181 ADGRB3O60242 1522 aa15.92■□□□□ 0.14
LINC01562-201ENST00000366181 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
LINC01562-201ENST00000366181 PPLO60437 1756 aa15.91■□□□□ 0.14
LINC01562-201ENST00000366181 SETD1BQ9UPS6 1966 aaKnown RBP15.91■□□□□ 0.14
LINC01562-201ENST00000366181 TNRQ92752 1358 aa15.91■□□□□ 0.14
LINC01562-201ENST00000366181 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
LINC01562-201ENST00000366181 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
LINC01562-201ENST00000366181 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
LINC01562-201ENST00000366181 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
LINC01562-201ENST00000366181 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
LINC01562-201ENST00000366181 NEXMIFQ5QGS0 1516 aa15.85■□□□□ 0.13
LINC01562-201ENST00000366181 NBPF8Q3BBV2 869 aa15.85■□□□□ 0.13
LINC01562-201ENST00000366181 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
LINC01562-201ENST00000366181 SLC52A1Q9NWF4 448 aa15.84■□□□□ 0.13
LINC01562-201ENST00000366181 CEP170BQ9Y4F5 1589 aaPredicted RBP15.84■□□□□ 0.13
LINC01562-201ENST00000366181 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
LINC01562-201ENST00000366181 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
LINC01562-201ENST00000366181 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms