RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PTPN23Q9H3S7 1636 aa21.45■■□□□ 1.02
TNFRSF1A-202ENST00000366159 KDM5DQ9BY66 1539 aa21.45■■□□□ 1.02
TNFRSF1A-202ENST00000366159 TCOF1Q13428 1488 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-202ENST00000366159 RNF17Q9BXT8 1623 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1A-202ENST00000366159 ABCC5O15440 1437 aa21.43■■□□□ 1.02
TNFRSF1A-202ENST00000366159 FGD6Q6ZV73 1430 aa21.43■■□□□ 1.02
TNFRSF1A-202ENST00000366159 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
TNFRSF1A-202ENST00000366159 EIF2AK4Q9P2K8 1649 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-202ENST00000366159 PZPP20742 1482 aa21.41■■□□□ 1.02
TNFRSF1A-202ENST00000366159 SHANK2Q9UPX8 1470 aa21.41■■□□□ 1.02
TNFRSF1A-202ENST00000366159 CROCC2H7BZ55 1655 aa21.41■■□□□ 1.02
TNFRSF1A-202ENST00000366159 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
TNFRSF1A-202ENST00000366159 CEP170BQ9Y4F5 1589 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-202ENST00000366159 CERKQ8TCT0 537 aa21.4■■□□□ 1.02
TNFRSF1A-202ENST00000366159 FBXO31Q5XUX0 539 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-202ENST00000366159 MROH1Q8NDA8 1641 aa21.39■■□□□ 1.01
TNFRSF1A-202ENST00000366159 DUOX2Q9NRD8 1548 aa21.38■■□□□ 1.01
TNFRSF1A-202ENST00000366159 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-202ENST00000366159 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-202ENST00000366159 DAPK1P53355 1430 aa21.38■■□□□ 1.01
TNFRSF1A-202ENST00000366159 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
TNFRSF1A-202ENST00000366159 A2ML1A8K2U0 1454 aa21.37■■□□□ 1.01
TNFRSF1A-202ENST00000366159 ABCC3O15438 1527 aa21.35■■□□□ 1.01
TNFRSF1A-202ENST00000366159 ZC3H13Q5T200 1668 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1A-202ENST00000366159 TNRQ92752 1358 aa21.34■■□□□ 1.01
TNFRSF1A-202ENST00000366159 KIF15Q9NS87 1388 aa21.33■■□□□ 1.01
TNFRSF1A-202ENST00000366159 NCKAP5LQ9HCH0 1330 aa21.32■■□□□ 1
TNFRSF1A-202ENST00000366159 ERBINQ96RT1 1412 aa21.32■■□□□ 1
TNFRSF1A-202ENST00000366159 PKD2Q13563 968 aa21.31■■□□□ 1
TNFRSF1A-202ENST00000366159 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
TNFRSF1A-202ENST00000366159 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
TNFRSF1A-202ENST00000366159 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-202ENST00000366159 NLRP1Q9C000 1473 aa21.29■■□□□ 1
TNFRSF1A-202ENST00000366159 SPATA31D1Q6ZQQ2 1576 aa21.28■■□□□ 1
TNFRSF1A-202ENST00000366159 DEPDC5O75140 1603 aa21.27■■□□□ 1
TNFRSF1A-202ENST00000366159 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
TNFRSF1A-202ENST00000366159 CEP152O94986 1710 aa21.26■□□□□ 0.99
TNFRSF1A-202ENST00000366159 ANKRD30AQ9BXX3 1397 aa21.25■□□□□ 0.99
TNFRSF1A-202ENST00000366159 ERVK-7P63135 1459 aa21.24■□□□□ 0.99
TNFRSF1A-202ENST00000366159 ARHGAP31Q2M1Z3 1444 aa21.24■□□□□ 0.99
TNFRSF1A-202ENST00000366159 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
TNFRSF1A-202ENST00000366159 NEURL4Q96JN8 1562 aa21.22■□□□□ 0.99
TNFRSF1A-202ENST00000366159 UGGT1Q9NYU2 1555 aa21.22■□□□□ 0.99
TNFRSF1A-202ENST00000366159 VWDEQ8N2E2 1590 aa21.21■□□□□ 0.99
TNFRSF1A-202ENST00000366159 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1A-202ENST00000366159 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
TNFRSF1A-202ENST00000366159 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-202ENST00000366159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.19■□□□□ 0.98
TNFRSF1A-202ENST00000366159 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
TNFRSF1A-202ENST00000366159 ZNF335Q9H4Z2 1342 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1A-202ENST00000366159 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-202ENST00000366159 MED14O60244 1454 aa21.16■□□□□ 0.98
TNFRSF1A-202ENST00000366159 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
TNFRSF1A-202ENST00000366159 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1A-202ENST00000366159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.14■□□□□ 0.97
TNFRSF1A-202ENST00000366159 KANK1Q14678 1352 aa21.14■□□□□ 0.97
TNFRSF1A-202ENST00000366159 UBR1Q8IWV7 1749 aa21.13■□□□□ 0.97
TNFRSF1A-202ENST00000366159 ANKRD50Q9ULJ7 1429 aa21.11■□□□□ 0.97
TNFRSF1A-202ENST00000366159 NPHP4O75161 1426 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-202ENST00000366159 ROCK1Q13464 1354 aa21.08■□□□□ 0.97
TNFRSF1A-202ENST00000366159 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
TNFRSF1A-202ENST00000366159 ARHGAP23Q9P227 1491 aa21.08■□□□□ 0.96
TNFRSF1A-202ENST00000366159 SLIT1O75093 1534 aa21.07■□□□□ 0.96
TNFRSF1A-202ENST00000366159 NOS1P29475 1434 aa21.07■□□□□ 0.96
TNFRSF1A-202ENST00000366159 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
TNFRSF1A-202ENST00000366159 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
TNFRSF1A-202ENST00000366159 SYNMO15061 1565 aa21.05■□□□□ 0.96
TNFRSF1A-202ENST00000366159 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-202ENST00000366159 KDM5AP29375 1690 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-202ENST00000366159 IDI1Q13907 227 aa21.04■□□□□ 0.96
TNFRSF1A-202ENST00000366159 CPS1P31327 1500 aa21.03■□□□□ 0.96
TNFRSF1A-202ENST00000366159 LTKP29376 864 aa21.03■□□□□ 0.96
TNFRSF1A-202ENST00000366159 UNC13BO14795 1591 aa21.02■□□□□ 0.96
TNFRSF1A-202ENST00000366159 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-202ENST00000366159 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-202ENST00000366159 TET3O43151 1660 aa21■□□□□ 0.95
TNFRSF1A-202ENST00000366159 TMEM2Q9UHN6 1383 aa21■□□□□ 0.95
TNFRSF1A-202ENST00000366159 STRCP1A6NGW2 1772 aa20.97■□□□□ 0.95
TNFRSF1A-202ENST00000366159 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
TNFRSF1A-202ENST00000366159 SLC52A1Q9NWF4 448 aa20.97■□□□□ 0.95
TNFRSF1A-202ENST00000366159 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1A-202ENST00000366159 GCC2Q8IWJ2 1684 aa20.96■□□□□ 0.95
TNFRSF1A-202ENST00000366159 UBAP1LF5GYI3 381 aa20.95■□□□□ 0.94
TNFRSF1A-202ENST00000366159 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
TNFRSF1A-202ENST00000366159 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
TNFRSF1A-202ENST00000366159 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
TNFRSF1A-202ENST00000366159 ITGAEP38570 1179 aa20.92■□□□□ 0.94
TNFRSF1A-202ENST00000366159 E9PCH4 1651 aa20.92■□□□□ 0.94
TNFRSF1A-202ENST00000366159 STAG3Q9UJ98 1225 aa20.91■□□□□ 0.94
TNFRSF1A-202ENST00000366159 LRRC7Q96NW7 1537 aa20.9■□□□□ 0.94
TNFRSF1A-202ENST00000366159 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
TNFRSF1A-202ENST00000366159 NUP155O75694 1391 aa20.88■□□□□ 0.93
TNFRSF1A-202ENST00000366159 TMEM131LA2VDJ0 1609 aa20.88■□□□□ 0.93
TNFRSF1A-202ENST00000366159 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
TNFRSF1A-202ENST00000366159 TOM1O60784 492 aa20.85■□□□□ 0.93
TNFRSF1A-202ENST00000366159 MYO5BQ9ULV0 1848 aa20.84■□□□□ 0.93
TNFRSF1A-202ENST00000366159 NAIPQ13075 1403 aa20.83■□□□□ 0.92
TNFRSF1A-202ENST00000366159 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-202ENST00000366159 RIMS2Q9UQ26 1411 aa20.79■□□□□ 0.92
TNFRSF1A-202ENST00000366159 SLC26A8Q96RN1 970 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms