RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
RN7SKP249-201ENST00000365490 KIF3BO15066 747 aa14.5□□□□□ -0.09
RN7SKP249-201ENST00000365490 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
RN7SKP249-201ENST00000365490 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
RN7SKP249-201ENST00000365490 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
RN7SKP249-201ENST00000365490 VWDEQ8N2E2 1590 aa14.48□□□□□ -0.09
RN7SKP249-201ENST00000365490 PRDM15P57071 1507 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP249-201ENST00000365490 NUP155O75694 1391 aa14.47□□□□□ -0.09
RN7SKP249-201ENST00000365490 PZPP20742 1482 aa14.46□□□□□ -0.09
RN7SKP249-201ENST00000365490 IQGAP3Q86VI3 1631 aa14.46□□□□□ -0.09
RN7SKP249-201ENST00000365490 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.1
RN7SKP249-201ENST00000365490 TRIM52Q96A61 297 aa14.45□□□□□ -0.1
RN7SKP249-201ENST00000365490 MPHOSPH9Q99550 1183 aa14.45□□□□□ -0.1
RN7SKP249-201ENST00000365490 PPP6R1Q9UPN7 881 aa14.45□□□□□ -0.1
RN7SKP249-201ENST00000365490 FAM135AQ9P2D6 1515 aa14.44□□□□□ -0.1
RN7SKP249-201ENST00000365490 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
RN7SKP249-201ENST00000365490 GGT6Q6P531 493 aa14.42□□□□□ -0.1
RN7SKP249-201ENST00000365490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
RN7SKP249-201ENST00000365490 KANK1Q14678 1352 aa14.42□□□□□ -0.1
RN7SKP249-201ENST00000365490 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
RN7SKP249-201ENST00000365490 ABCC3O15438 1527 aa14.4□□□□□ -0.1
RN7SKP249-201ENST00000365490 TET3O43151 1660 aa14.39□□□□□ -0.11
RN7SKP249-201ENST00000365490 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
RN7SKP249-201ENST00000365490 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
RN7SKP249-201ENST00000365490 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
RN7SKP249-201ENST00000365490 PKD2Q13563 968 aa14.37□□□□□ -0.11
RN7SKP249-201ENST00000365490 ARID4BQ4LE39 1312 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP249-201ENST00000365490 CEP152O94986 1710 aa14.36□□□□□ -0.11
RN7SKP249-201ENST00000365490 ARHGAP31Q2M1Z3 1444 aa14.36□□□□□ -0.11
RN7SKP249-201ENST00000365490 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
RN7SKP249-201ENST00000365490 EFCAB6Q5THR3 1501 aa14.36□□□□□ -0.11
RN7SKP249-201ENST00000365490 E9PCH4 1651 aa14.35□□□□□ -0.11
RN7SKP249-201ENST00000365490 ANKRD30BQ9BXX2 1392 aa14.34□□□□□ -0.11
RN7SKP249-201ENST00000365490 RPRD2Q5VT52 1461 aaKnown RBP14.34□□□□□ -0.11
RN7SKP249-201ENST00000365490 MLECQ14165 292 aa14.34□□□□□ -0.11
RN7SKP249-201ENST00000365490 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.11
RN7SKP249-201ENST00000365490 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.12
RN7SKP249-201ENST00000365490 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
RN7SKP249-201ENST00000365490 FOXD1Q16676 465 aa14.32□□□□□ -0.12
RN7SKP249-201ENST00000365490 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
RN7SKP249-201ENST00000365490 PTPRTO14522 1441 aa14.32□□□□□ -0.12
RN7SKP249-201ENST00000365490 NPATQ14207 1427 aa14.32□□□□□ -0.12
RN7SKP249-201ENST00000365490 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
RN7SKP249-201ENST00000365490 MROH2AA6NES4 1674 aa14.31□□□□□ -0.12
RN7SKP249-201ENST00000365490 ZMYM3Q14202 1370 aa14.3□□□□□ -0.12
RN7SKP249-201ENST00000365490 FER1L4A9Z1Z3 1794 aa14.28□□□□□ -0.12
RN7SKP249-201ENST00000365490 NOS1P29475 1434 aa14.28□□□□□ -0.12
RN7SKP249-201ENST00000365490 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
RN7SKP249-201ENST00000365490 SPHKAPQ2M3C7 1700 aa14.27□□□□□ -0.13
RN7SKP249-201ENST00000365490 TRPM2O94759 1503 aa14.26□□□□□ -0.13
RN7SKP249-201ENST00000365490 MADDQ8WXG6 1647 aa14.26□□□□□ -0.13
RN7SKP249-201ENST00000365490 PREX1Q8TCU6 1659 aa14.25□□□□□ -0.13
RN7SKP249-201ENST00000365490 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
RN7SKP249-201ENST00000365490 SPATA31D1Q6ZQQ2 1576 aa14.24□□□□□ -0.13
RN7SKP249-201ENST00000365490 ERVK-7P63135 1459 aa14.24□□□□□ -0.13
RN7SKP249-201ENST00000365490 C3P01024 1663 aa14.23□□□□□ -0.13
RN7SKP249-201ENST00000365490 FBXO31Q5XUX0 539 aaPredicted RBP14.23□□□□□ -0.13
RN7SKP249-201ENST00000365490 CFAP65Q6ZU64 1925 aaKnown RBP14.23□□□□□ -0.13
RN7SKP249-201ENST00000365490 SYNMO15061 1565 aa14.22□□□□□ -0.13
RN7SKP249-201ENST00000365490 PIK3C2BO00750 1634 aa14.22□□□□□ -0.13
RN7SKP249-201ENST00000365490 RIMS1Q86UR5 1692 aaKnown RBP14.21□□□□□ -0.13
RN7SKP249-201ENST00000365490 SLC52A1Q9NWF4 448 aa14.21□□□□□ -0.13
RN7SKP249-201ENST00000365490 TIMELESSQ9UNS1 1208 aa14.21□□□□□ -0.13
RN7SKP249-201ENST00000365490 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
RN7SKP249-201ENST00000365490 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
RN7SKP249-201ENST00000365490 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
RN7SKP249-201ENST00000365490 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
RN7SKP249-201ENST00000365490 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
RN7SKP249-201ENST00000365490 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
RN7SKP249-201ENST00000365490 PTPRMP28827 1452 aa14.18□□□□□ -0.14
RN7SKP249-201ENST00000365490 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
RN7SKP249-201ENST00000365490 SPATA31E1Q6ZUB1 1445 aa14.17□□□□□ -0.14
RN7SKP249-201ENST00000365490 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
RN7SKP249-201ENST00000365490 IDI1Q13907 227 aa14.17□□□□□ -0.14
RN7SKP249-201ENST00000365490 TNRQ92752 1358 aa14.16□□□□□ -0.14
RN7SKP249-201ENST00000365490 KIF1BO60333 1816 aa14.15□□□□□ -0.14
RN7SKP249-201ENST00000365490 NLRP1Q9C000 1473 aa14.14□□□□□ -0.15
RN7SKP249-201ENST00000365490 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
RN7SKP249-201ENST00000365490 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
RN7SKP249-201ENST00000365490 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
RN7SKP249-201ENST00000365490 KDM5AP29375 1690 aaKnown RBP14.13□□□□□ -0.15
RN7SKP249-201ENST00000365490 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
RN7SKP249-201ENST00000365490 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
RN7SKP249-201ENST00000365490 STAC3Q96MF2 364 aa14.1□□□□□ -0.15
RN7SKP249-201ENST00000365490 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
RN7SKP249-201ENST00000365490 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
RN7SKP249-201ENST00000365490 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.15
RN7SKP249-201ENST00000365490 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
RN7SKP249-201ENST00000365490 RGL3Q3MIN7 710 aa14.08□□□□□ -0.16
RN7SKP249-201ENST00000365490 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
RN7SKP249-201ENST00000365490 MYO5BQ9ULV0 1848 aa14.07□□□□□ -0.16
RN7SKP249-201ENST00000365490 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
RN7SKP249-201ENST00000365490 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
RN7SKP249-201ENST00000365490 ZNF142P52746 1687 aaPredicted RBP14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 DCAF11Q8TEB1 546 aa14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
RN7SKP249-201ENST00000365490 CEP170BQ9Y4F5 1589 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms