RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 NUP155O75694 1391 aa9.76□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 ABCA6Q8N139 1617 aa9.75□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 AGLP35573 1532 aa9.75□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 REREQ9P2R6 1566 aa9.75□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 MPHOSPH9Q99550 1183 aa9.72□□□□□ -0.85
VTRNA3-1P-201ENST00000362552 CNTLNQ9NXG0 1405 aa9.71□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 EIF2AK4Q9P2K8 1649 aaKnown RBP9.7□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 PKD2Q13563 968 aa9.69□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 ZMYM3Q14202 1370 aa9.69□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 KDM4FA0A1W2PPD8 638 aa9.67□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 CEBPAP49715 358 aaPredicted RBP9.67□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 AEBP2Q6ZN18 517 aaPredicted RBP9.66□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 KDM5DQ9BY66 1539 aa9.65□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 FAM135AQ9P2D6 1515 aa9.65□□□□□ -0.86
VTRNA3-1P-201ENST00000362552 BCORL1Q5H9F3 1711 aa9.65□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 RNF17Q9BXT8 1623 aaKnown RBP9.64□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 FBXO31Q5XUX0 539 aaPredicted RBP9.64□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 ABCC3O15438 1527 aa9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 PRDM15P57071 1507 aaPredicted RBP9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 CHGAP10645 457 aaKnown RBP9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 FOXD1Q16676 465 aa9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 UNC13BO14795 1591 aa9.63□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 LMTK2Q8IWU2 1503 aa9.62□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 PTPRMP28827 1452 aa9.61□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 TNRQ92752 1358 aa9.61□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 ADAMTSL3P82987 1691 aa9.61□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 PZPP20742 1482 aa9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 RPRD2Q5VT52 1461 aaKnown RBP9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 VWDEQ8N2E2 1590 aa9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 HDGFP51858 240 aaKnown RBP9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 ZC3H13Q5T200 1668 aaKnown RBP9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 MROH1Q8NDA8 1641 aa9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 NPATQ14207 1427 aa9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 IDI1Q13907 227 aa9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 THEMISQ8N1K5 641 aaPredicted RBP9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 FER1L4A9Z1Z3 1794 aa9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
VTRNA3-1P-201ENST00000362552 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 TET3O43151 1660 aa9.58□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 EFCAB6Q5THR3 1501 aa9.57□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 CLSPNQ9HAW4 1339 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 CCDC144AA2RUR9 1427 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 CEP152O94986 1710 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 ERVK-7P63135 1459 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 ANKRD30BQ9BXX2 1392 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 PTPRTO14522 1441 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 NOS1P29475 1434 aa9.56□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 EID1Q9Y6B2 187 aa9.55□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 UHRF1BP1Q6BDS2 1440 aa9.55□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 NLRP1Q9C000 1473 aa9.54□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 BCANQ96GW7 911 aa9.54□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 C3P01024 1663 aa9.53□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 SPATA31D1Q6ZQQ2 1576 aa9.53□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
VTRNA3-1P-201ENST00000362552 E9PCH4 1651 aa9.52□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 VGFO15240 615 aaPredicted RBP9.52□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 STAC3Q96MF2 364 aa9.52□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 PLA2R1Q13018 1463 aa9.51□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 TONSLQ96HA7 1378 aa9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 PREX1Q8TCU6 1659 aa9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 TRPM2O94759 1503 aa9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 UGGT1Q9NYU2 1555 aa9.49□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 HSPA2P54652 639 aa9.48□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 SYNMO15061 1565 aa9.47□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 ZEB1P37275 1124 aaPredicted RBP9.47□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
VTRNA3-1P-201ENST00000362552 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms