RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
CNTF-201ENST00000361987 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
CNTF-201ENST00000361987 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
CNTF-201ENST00000361987 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
CNTF-201ENST00000361987 KANK1Q14678 1352 aa18.8■□□□□ 0.6
CNTF-201ENST00000361987 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
CNTF-201ENST00000361987 GCC2Q8IWJ2 1684 aa18.78■□□□□ 0.6
CNTF-201ENST00000361987 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
CNTF-201ENST00000361987 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
CNTF-201ENST00000361987 NUP155O75694 1391 aa18.77■□□□□ 0.6
CNTF-201ENST00000361987 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
CNTF-201ENST00000361987 CEBPAP49715 358 aaPredicted RBP18.76■□□□□ 0.59
CNTF-201ENST00000361987 FER1L4A9Z1Z3 1794 aa18.76■□□□□ 0.59
CNTF-201ENST00000361987 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
CNTF-201ENST00000361987 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
CNTF-201ENST00000361987 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
CNTF-201ENST00000361987 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
CNTF-201ENST00000361987 PRDM15P57071 1507 aaPredicted RBP18.74■□□□□ 0.59
CNTF-201ENST00000361987 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
CNTF-201ENST00000361987 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
CNTF-201ENST00000361987 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
CNTF-201ENST00000361987 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
CNTF-201ENST00000361987 PTPRMP28827 1452 aa18.72■□□□□ 0.59
CNTF-201ENST00000361987 ABCC3O15438 1527 aa18.71■□□□□ 0.59
CNTF-201ENST00000361987 UNC13BO14795 1591 aa18.7■□□□□ 0.58
CNTF-201ENST00000361987 FAM135AQ9P2D6 1515 aa18.68■□□□□ 0.58
CNTF-201ENST00000361987 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
CNTF-201ENST00000361987 HRCP23327 699 aa18.68■□□□□ 0.58
CNTF-201ENST00000361987 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
CNTF-201ENST00000361987 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
CNTF-201ENST00000361987 CEP152O94986 1710 aa18.68■□□□□ 0.58
CNTF-201ENST00000361987 FBXO31Q5XUX0 539 aaPredicted RBP18.67■□□□□ 0.58
CNTF-201ENST00000361987 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
CNTF-201ENST00000361987 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
CNTF-201ENST00000361987 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
CNTF-201ENST00000361987 MROH2AA6NES4 1674 aa18.64■□□□□ 0.58
CNTF-201ENST00000361987 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.57
CNTF-201ENST00000361987 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
CNTF-201ENST00000361987 C3P01024 1663 aa18.63■□□□□ 0.57
CNTF-201ENST00000361987 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
CNTF-201ENST00000361987 PKD2Q13563 968 aa18.63■□□□□ 0.57
CNTF-201ENST00000361987 NPATQ14207 1427 aa18.62■□□□□ 0.57
CNTF-201ENST00000361987 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
CNTF-201ENST00000361987 PZPP20742 1482 aa18.62■□□□□ 0.57
CNTF-201ENST00000361987 ARHGAP31Q2M1Z3 1444 aa18.61■□□□□ 0.57
CNTF-201ENST00000361987 TET3O43151 1660 aa18.6■□□□□ 0.57
CNTF-201ENST00000361987 EFCAB6Q5THR3 1501 aa18.6■□□□□ 0.57
CNTF-201ENST00000361987 FOXD1Q16676 465 aa18.59■□□□□ 0.57
CNTF-201ENST00000361987 RPRD2Q5VT52 1461 aaKnown RBP18.56■□□□□ 0.56
CNTF-201ENST00000361987 TNRQ92752 1358 aa18.56■□□□□ 0.56
CNTF-201ENST00000361987 E9PCH4 1651 aa18.55■□□□□ 0.56
CNTF-201ENST00000361987 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
CNTF-201ENST00000361987 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
CNTF-201ENST00000361987 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
CNTF-201ENST00000361987 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.55
CNTF-201ENST00000361987 NOS1P29475 1434 aa18.51■□□□□ 0.55
CNTF-201ENST00000361987 IDI1Q13907 227 aa18.5■□□□□ 0.55
CNTF-201ENST00000361987 UHRF1BP1Q6BDS2 1440 aa18.5■□□□□ 0.55
CNTF-201ENST00000361987 SLC52A1Q9NWF4 448 aa18.5■□□□□ 0.55
CNTF-201ENST00000361987 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
CNTF-201ENST00000361987 PTPRTO14522 1441 aa18.47■□□□□ 0.55
CNTF-201ENST00000361987 SYNMO15061 1565 aa18.46■□□□□ 0.55
CNTF-201ENST00000361987 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
CNTF-201ENST00000361987 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.54
CNTF-201ENST00000361987 PLA2R1Q13018 1463 aa18.45■□□□□ 0.54
CNTF-201ENST00000361987 HSPA2P54652 639 aa18.45■□□□□ 0.54
CNTF-201ENST00000361987 MYO3AQ8NEV4 1616 aa18.44■□□□□ 0.54
CNTF-201ENST00000361987 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
CNTF-201ENST00000361987 SPHKAPQ2M3C7 1700 aa18.44■□□□□ 0.54
CNTF-201ENST00000361987 UGGT1Q9NYU2 1555 aa18.44■□□□□ 0.54
CNTF-201ENST00000361987 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
CNTF-201ENST00000361987 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
CNTF-201ENST00000361987 LMTK3Q96Q04 1460 aa18.42■□□□□ 0.54
CNTF-201ENST00000361987 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
CNTF-201ENST00000361987 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
CNTF-201ENST00000361987 CCDC144AA2RUR9 1427 aa18.41■□□□□ 0.54
CNTF-201ENST00000361987 TRPM2O94759 1503 aa18.41■□□□□ 0.54
CNTF-201ENST00000361987 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
CNTF-201ENST00000361987 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
CNTF-201ENST00000361987 CLTCL1P53675 1640 aa18.36■□□□□ 0.53
CNTF-201ENST00000361987 ZNF142P52746 1687 aaPredicted RBP18.36■□□□□ 0.53
CNTF-201ENST00000361987 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
CNTF-201ENST00000361987 UBR1Q8IWV7 1749 aa18.34■□□□□ 0.53
CNTF-201ENST00000361987 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.53
CNTF-201ENST00000361987 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.53
CNTF-201ENST00000361987 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
CNTF-201ENST00000361987 ANKLE2Q86XL3 938 aa18.33■□□□□ 0.52
CNTF-201ENST00000361987 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
CNTF-201ENST00000361987 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
CNTF-201ENST00000361987 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
CNTF-201ENST00000361987 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
CNTF-201ENST00000361987 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
CNTF-201ENST00000361987 EID1Q9Y6B2 187 aa18.31■□□□□ 0.52
CNTF-201ENST00000361987 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
CNTF-201ENST00000361987 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
CNTF-201ENST00000361987 KIF1BO60333 1816 aa18.3■□□□□ 0.52
CNTF-201ENST00000361987 LTKP29376 864 aa18.29■□□□□ 0.52
CNTF-201ENST00000361987 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
CNTF-201ENST00000361987 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
CNTF-201ENST00000361987 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms