RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 EIF2AK4Q9P2K8 1649 aaKnown RBP26.84■■□□□ 1.89
CLK2-202ENST00000361168 SETD5Q9C0A6 1442 aa26.84■■□□□ 1.89
CLK2-202ENST00000361168 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.89
CLK2-202ENST00000361168 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
CLK2-202ENST00000361168 MADDQ8WXG6 1647 aa26.78■■□□□ 1.88
CLK2-202ENST00000361168 ADAMTSL3P82987 1691 aa26.78■■□□□ 1.88
CLK2-202ENST00000361168 DEPDC5O75140 1603 aa26.77■■□□□ 1.88
CLK2-202ENST00000361168 WASHC2CQ9Y4E1 1318 aa26.77■■□□□ 1.88
CLK2-202ENST00000361168 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
CLK2-202ENST00000361168 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
CLK2-202ENST00000361168 NUP155O75694 1391 aa26.75■■□□□ 1.87
CLK2-202ENST00000361168 TRIM52Q96A61 297 aa26.74■■□□□ 1.87
CLK2-202ENST00000361168 CEBPAP49715 358 aaPredicted RBP26.73■■□□□ 1.87
CLK2-202ENST00000361168 UNC13BO14795 1591 aa26.72■■□□□ 1.87
CLK2-202ENST00000361168 FER1L4A9Z1Z3 1794 aa26.71■■□□□ 1.87
CLK2-202ENST00000361168 ABCC3O15438 1527 aa26.7■■□□□ 1.87
CLK2-202ENST00000361168 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.86
CLK2-202ENST00000361168 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.86
CLK2-202ENST00000361168 VWDEQ8N2E2 1590 aa26.69■■□□□ 1.86
CLK2-202ENST00000361168 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
CLK2-202ENST00000361168 KDM5DQ9BY66 1539 aa26.69■■□□□ 1.86
CLK2-202ENST00000361168 CEP152O94986 1710 aa26.68■■□□□ 1.86
CLK2-202ENST00000361168 PPP6R1Q9UPN7 881 aa26.67■■□□□ 1.86
CLK2-202ENST00000361168 ZMYM3Q14202 1370 aa26.67■■□□□ 1.86
CLK2-202ENST00000361168 KANK1Q14678 1352 aa26.67■■□□□ 1.86
CLK2-202ENST00000361168 FAM135AQ9P2D6 1515 aa26.64■■□□□ 1.86
CLK2-202ENST00000361168 PZPP20742 1482 aa26.64■■□□□ 1.86
CLK2-202ENST00000361168 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
CLK2-202ENST00000361168 PTPRMP28827 1452 aa26.63■■□□□ 1.85
CLK2-202ENST00000361168 IQGAP3Q86VI3 1631 aa26.62■■□□□ 1.85
CLK2-202ENST00000361168 FOXD1Q16676 465 aa26.61■■□□□ 1.85
CLK2-202ENST00000361168 CNTLNQ9NXG0 1405 aa26.6■■□□□ 1.85
CLK2-202ENST00000361168 SLC4A1APQ9BWU0 796 aaKnown RBP26.6■■□□□ 1.85
CLK2-202ENST00000361168 LMTK2Q8IWU2 1503 aa26.59■■□□□ 1.85
CLK2-202ENST00000361168 NPATQ14207 1427 aa26.59■■□□□ 1.85
CLK2-202ENST00000361168 CAMSAP1Q5T5Y3 1602 aa26.58■■□□□ 1.85
CLK2-202ENST00000361168 HRCP23327 699 aa26.58■■□□□ 1.85
CLK2-202ENST00000361168 MPHOSPH9Q99550 1183 aa26.58■■□□□ 1.85
CLK2-202ENST00000361168 C3P01024 1663 aa26.57■■□□□ 1.84
CLK2-202ENST00000361168 ZC3H13Q5T200 1668 aaKnown RBP26.57■■□□□ 1.84
CLK2-202ENST00000361168 PKD2Q13563 968 aa26.55■■□□□ 1.84
CLK2-202ENST00000361168 EFCAB6Q5THR3 1501 aa26.55■■□□□ 1.84
CLK2-202ENST00000361168 CFAP65Q6ZU64 1925 aaKnown RBP26.54■■□□□ 1.84
CLK2-202ENST00000361168 MROH2AA6NES4 1674 aa26.53■■□□□ 1.84
CLK2-202ENST00000361168 TET3O43151 1660 aa26.53■■□□□ 1.84
CLK2-202ENST00000361168 E9PCH4 1651 aa26.51■■□□□ 1.84
CLK2-202ENST00000361168 ARHGAP31Q2M1Z3 1444 aa26.51■■□□□ 1.83
CLK2-202ENST00000361168 ERVK-7P63135 1459 aa26.46■■□□□ 1.83
CLK2-202ENST00000361168 PREX1Q8TCU6 1659 aa26.42■■□□□ 1.82
CLK2-202ENST00000361168 PLA2R1Q13018 1463 aa26.42■■□□□ 1.82
CLK2-202ENST00000361168 RPRD2Q5VT52 1461 aaKnown RBP26.42■■□□□ 1.82
CLK2-202ENST00000361168 NOS1P29475 1434 aa26.41■■□□□ 1.82
CLK2-202ENST00000361168 UGGT1Q9NYU2 1555 aa26.41■■□□□ 1.82
CLK2-202ENST00000361168 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
CLK2-202ENST00000361168 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
CLK2-202ENST00000361168 ACIN1Q9UKV3 1341 aaKnown RBP26.4■■□□□ 1.82
CLK2-202ENST00000361168 TNRQ92752 1358 aa26.4■■□□□ 1.82
CLK2-202ENST00000361168 SYNMO15061 1565 aa26.4■■□□□ 1.82
CLK2-202ENST00000361168 PTPRTO14522 1441 aa26.37■■□□□ 1.81
CLK2-202ENST00000361168 IDI1Q13907 227 aa26.36■■□□□ 1.81
CLK2-202ENST00000361168 SPHKAPQ2M3C7 1700 aa26.32■■□□□ 1.8
CLK2-202ENST00000361168 ANKRD30BQ9BXX2 1392 aa26.31■■□□□ 1.8
CLK2-202ENST00000361168 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CLK2-202ENST00000361168 MYO3AQ8NEV4 1616 aa26.3■■□□□ 1.8
CLK2-202ENST00000361168 TRPM2O94759 1503 aa26.29■■□□□ 1.8
CLK2-202ENST00000361168 SETD1BQ9UPS6 1966 aaKnown RBP26.28■■□□□ 1.8
CLK2-202ENST00000361168 HSPA2P54652 639 aa26.26■■□□□ 1.79
CLK2-202ENST00000361168 SLC52A1Q9NWF4 448 aa26.26■■□□□ 1.79
CLK2-202ENST00000361168 CLTCL1P53675 1640 aa26.26■■□□□ 1.79
CLK2-202ENST00000361168 UHRF1BP1Q6BDS2 1440 aa26.26■■□□□ 1.79
CLK2-202ENST00000361168 LMTK3Q96Q04 1460 aa26.25■■□□□ 1.79
CLK2-202ENST00000361168 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
CLK2-202ENST00000361168 CHGAP10645 457 aaKnown RBP26.24■■□□□ 1.79
CLK2-202ENST00000361168 SIN3AQ96ST3 1273 aa26.24■■□□□ 1.79
CLK2-202ENST00000361168 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
CLK2-202ENST00000361168 CEP170BQ9Y4F5 1589 aaPredicted RBP26.23■■□□□ 1.79
CLK2-202ENST00000361168 CCDC144AA2RUR9 1427 aa26.22■■□□□ 1.79
CLK2-202ENST00000361168 A2ML1A8K2U0 1454 aa26.21■■□□□ 1.79
CLK2-202ENST00000361168 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
CLK2-202ENST00000361168 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
CLK2-202ENST00000361168 UBR1Q8IWV7 1749 aa26.16■■□□□ 1.78
CLK2-202ENST00000361168 ZNF142P52746 1687 aaPredicted RBP26.16■■□□□ 1.78
CLK2-202ENST00000361168 NEUROD1Q13562 356 aa26.16■■□□□ 1.78
CLK2-202ENST00000361168 RGL3Q3MIN7 710 aa26.16■■□□□ 1.78
CLK2-202ENST00000361168 TMEM131LA2VDJ0 1609 aa26.16■■□□□ 1.78
CLK2-202ENST00000361168 NUTM2DQ5VT03 806 aaPredicted RBP26.14■■□□□ 1.77
CLK2-202ENST00000361168 MYO5BQ9ULV0 1848 aa26.13■■□□□ 1.77
CLK2-202ENST00000361168 ADGRB3O60242 1522 aa26.13■■□□□ 1.77
CLK2-202ENST00000361168 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
CLK2-202ENST00000361168 SPATA31E1Q6ZUB1 1445 aa26.11■■□□□ 1.77
CLK2-202ENST00000361168 THEMISQ8N1K5 641 aaPredicted RBP26.11■■□□□ 1.77
CLK2-202ENST00000361168 ZNF326Q5BKZ1 582 aaKnown RBP26.1■■□□□ 1.77
CLK2-202ENST00000361168 LTKP29376 864 aa26.08■■□□□ 1.77
CLK2-202ENST00000361168 TMEM2Q9UHN6 1383 aa26.07■■□□□ 1.76
CLK2-202ENST00000361168 KIF1BO60333 1816 aa26.07■■□□□ 1.76
CLK2-202ENST00000361168 NCKAP5LQ9HCH0 1330 aa26.05■■□□□ 1.76
CLK2-202ENST00000361168 KDM5AP29375 1690 aaKnown RBP26.03■■□□□ 1.76
CLK2-202ENST00000361168 ZFYVE9O95405 1425 aa26.02■■□□□ 1.76
CLK2-202ENST00000361168 TXNDC2Q86VQ3 553 aa26.02■■□□□ 1.76
CLK2-202ENST00000361168 RIMS2Q9UQ26 1411 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms