RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CCDC144AA2RUR9 1427 aa36.3■■■■□ 3.4
CUEDC1-201ENST00000360238 ERBINQ96RT1 1412 aa36.3■■■■□ 3.4
CUEDC1-201ENST00000360238 MRS2Q9HD23 443 aa36.28■■■■□ 3.4
CUEDC1-201ENST00000360238 TRPM1Q7Z4N2 1603 aa36.28■■■■□ 3.4
CUEDC1-201ENST00000360238 CARD11Q9BXL7 1154 aa36.26■■■■□ 3.4
CUEDC1-201ENST00000360238 BCANQ96GW7 911 aa36.26■■■■□ 3.39
CUEDC1-201ENST00000360238 ARAP3Q8WWN8 1544 aa36.25■■■■□ 3.39
CUEDC1-201ENST00000360238 DCAF11Q8TEB1 546 aa36.22■■■■□ 3.39
CUEDC1-201ENST00000360238 PLA2R1Q13018 1463 aa36.22■■■■□ 3.39
CUEDC1-201ENST00000360238 PRAG1Q86YV5 1406 aa36.21■■■■□ 3.39
CUEDC1-201ENST00000360238 ATP10AO60312 1499 aa36.2■■■■□ 3.39
CUEDC1-201ENST00000360238 LAMC1P11047 1609 aa36.19■■■■□ 3.38
CUEDC1-201ENST00000360238 EFCAB2Q5VUJ9 269 aa36.19■■■■□ 3.38
CUEDC1-201ENST00000360238 E9PCH4 1651 aa36.18■■■■□ 3.38
CUEDC1-201ENST00000360238 TSHZ2Q9NRE2 1034 aa36.16■■■■□ 3.38
CUEDC1-201ENST00000360238 KDM2AQ9Y2K7 1162 aa36.16■■■■□ 3.38
CUEDC1-201ENST00000360238 ZBED9Q6R2W3 1325 aa36.16■■■■□ 3.38
CUEDC1-201ENST00000360238 FAM9BQ8IZU0 186 aa36.14■■■■□ 3.38
CUEDC1-201ENST00000360238 EIF2AK4Q9P2K8 1649 aaKnown RBP36.13■■■■□ 3.37
CUEDC1-201ENST00000360238 A2MP01023 1474 aa36.12■■■■□ 3.37
CUEDC1-201ENST00000360238 GPRASP1Q5JY77 1395 aa36.09■■■■□ 3.37
CUEDC1-201ENST00000360238 TRAPPC8Q9Y2L5 1435 aa36.09■■■■□ 3.37
CUEDC1-201ENST00000360238 ST20-MTHFSA0A0A6YYL1 179 aa36.08■■■■□ 3.37
CUEDC1-201ENST00000360238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.08■■■■□ 3.37
CUEDC1-201ENST00000360238 POLR3GLQ9BT43 218 aa36.08■■■■□ 3.37
CUEDC1-201ENST00000360238 RTEL1-TNFRSF6BF6WH68 1400 aa36.07■■■■□ 3.36
CUEDC1-201ENST00000360238 ZFYVE16Q7Z3T8 1539 aa36.06■■■■□ 3.36
CUEDC1-201ENST00000360238 PRDM15P57071 1507 aaPredicted RBP36.04■■■■□ 3.36
CUEDC1-201ENST00000360238 ABCA9Q8IUA7 1624 aa36.02■■■■□ 3.36
CUEDC1-201ENST00000360238 WDR7Q9Y4E6 1490 aa36.02■■■■□ 3.36
CUEDC1-201ENST00000360238 KTN1Q86UP2 1357 aaKnown RBP36.02■■■■□ 3.36
CUEDC1-201ENST00000360238 DEPDC5O75140 1603 aa36■■■■□ 3.35
CUEDC1-201ENST00000360238 ERICH6BQ5W0A0 696 aa35.98■■■■□ 3.35
CUEDC1-201ENST00000360238 RNF17Q9BXT8 1623 aaKnown RBP35.97■■■■□ 3.35
CUEDC1-201ENST00000360238 INO80Q9ULG1 1556 aaPredicted RBP35.96■■■■□ 3.35
CUEDC1-201ENST00000360238 SPAG9O60271 1321 aaKnown RBP35.94■■■■□ 3.34
CUEDC1-201ENST00000360238 RGL3Q3MIN7 710 aa35.93■■■■□ 3.34
CUEDC1-201ENST00000360238 TRPM2O94759 1503 aa35.91■■■■□ 3.34
CUEDC1-201ENST00000360238 COL17A1Q9UMD9 1497 aaPredicted RBP35.91■■■■□ 3.34
CUEDC1-201ENST00000360238 SPHKAPQ2M3C7 1700 aa35.91■■■■□ 3.34
CUEDC1-201ENST00000360238 CEP152O94986 1710 aa35.9■■■■□ 3.34
CUEDC1-201ENST00000360238 ATP7AQ04656 1500 aa35.89■■■■□ 3.34
CUEDC1-201ENST00000360238 TET3O43151 1660 aa35.88■■■■□ 3.33
CUEDC1-201ENST00000360238 FANCAO15360 1455 aa35.88■■■■□ 3.33
CUEDC1-201ENST00000360238 RALBP1Q15311 655 aa35.86■■■■□ 3.33
CUEDC1-201ENST00000360238 NBPF1Q3BBV0 1214 aa35.86■■■■□ 3.33
CUEDC1-201ENST00000360238 BRD4O60885 1362 aaPredicted RBP35.84■■■■□ 3.33
CUEDC1-201ENST00000360238 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
CUEDC1-201ENST00000360238 SMG6Q86US8 1419 aaKnown RBP35.83■■■■□ 3.33
CUEDC1-201ENST00000360238 MYBBP1AQ9BQG0 1328 aaKnown RBP35.83■■■■□ 3.33
CUEDC1-201ENST00000360238 VWDEQ8N2E2 1590 aa35.82■■■■□ 3.33
CUEDC1-201ENST00000360238 PNISRQ8TF01 805 aaKnown RBP35.81■■■■□ 3.32
CUEDC1-201ENST00000360238 AFAP1Q8N556 730 aa35.81■■■■□ 3.32
CUEDC1-201ENST00000360238 PTPRTO14522 1441 aa35.8■■■■□ 3.32
CUEDC1-201ENST00000360238 TMC1Q8TDI8 760 aa35.78■■■■□ 3.32
CUEDC1-201ENST00000360238 LRPPRCP42704 1394 aaKnown RBP35.78■■■■□ 3.32
CUEDC1-201ENST00000360238 CNGB1Q14028 1251 aaPredicted RBP35.78■■■■□ 3.32
CUEDC1-201ENST00000360238 CLTCL1P53675 1640 aa35.77■■■■□ 3.32
CUEDC1-201ENST00000360238 IRX6P78412 446 aaPredicted RBP35.76■■■■□ 3.32
CUEDC1-201ENST00000360238 IQGAP1P46940 1657 aa35.76■■■■□ 3.32
CUEDC1-201ENST00000360238 ADGRL1O94910 1474 aa35.76■■■■□ 3.32
CUEDC1-201ENST00000360238 TESK2Q96S53 571 aa35.75■■■■□ 3.31
CUEDC1-201ENST00000360238 PARD3Q8TEW0 1356 aa35.74■■■■□ 3.31
CUEDC1-201ENST00000360238 NEURL4Q96JN8 1562 aa35.73■■■■□ 3.31
CUEDC1-201ENST00000360238 DISP3Q9P2K9 1392 aa35.72■■■■□ 3.31
CUEDC1-201ENST00000360238 ASXL2Q76L83 1435 aa35.71■■■■□ 3.31
CUEDC1-201ENST00000360238 KANK1Q14678 1352 aa35.71■■■■□ 3.31
CUEDC1-201ENST00000360238 PPP4R2Q9NY27 417 aa35.71■■■■□ 3.31
CUEDC1-201ENST00000360238 STAC3Q96MF2 364 aa35.7■■■■□ 3.31
CUEDC1-201ENST00000360238 WASHC2CQ9Y4E1 1318 aa35.69■■■■□ 3.3
CUEDC1-201ENST00000360238 MROH1Q8NDA8 1641 aa35.69■■■■□ 3.3
CUEDC1-201ENST00000360238 SCAPERQ9BY12 1400 aa35.68■■■■□ 3.3
CUEDC1-201ENST00000360238 NUDCQ9Y266 331 aa35.68■■■■□ 3.3
CUEDC1-201ENST00000360238 MYT1Q01538 1121 aa35.65■■■■□ 3.3
CUEDC1-201ENST00000360238 PER1O15534 1290 aaPredicted RBP35.65■■■■□ 3.3
CUEDC1-201ENST00000360238 KIAA1210Q9ULL0 1709 aa35.65■■■■□ 3.3
CUEDC1-201ENST00000360238 TMF1P82094 1093 aa35.64■■■■□ 3.3
CUEDC1-201ENST00000360238 NLRP13Q86W25 1043 aa35.64■■■■□ 3.3
CUEDC1-201ENST00000360238 KIDINS220Q9ULH0 1771 aa35.62■■■■□ 3.29
CUEDC1-201ENST00000360238 CFAP74Q9C0B2 1584 aa35.59■■■■□ 3.29
CUEDC1-201ENST00000360238 RNF123Q5XPI4 1314 aa35.57■■■■□ 3.28
CUEDC1-201ENST00000360238 EFCAB6Q5THR3 1501 aa35.56■■■■□ 3.28
CUEDC1-201ENST00000360238 SCAF11Q99590 1463 aaKnown RBP35.56■■■■□ 3.28
CUEDC1-201ENST00000360238 ZNF518AQ6AHZ1 1483 aa35.55■■■■□ 3.28
CUEDC1-201ENST00000360238 RBM19Q9Y4C8 960 aaKnown RBP35.55■■■■□ 3.28
CUEDC1-201ENST00000360238 ZMYM4Q5VZL5 1548 aa35.55■■■■□ 3.28
CUEDC1-201ENST00000360238 KIF1BO60333 1816 aa35.54■■■■□ 3.28
CUEDC1-201ENST00000360238 KIF3BO15066 747 aa35.52■■■■□ 3.28
CUEDC1-201ENST00000360238 LMTK2Q8IWU2 1503 aa35.51■■■■□ 3.28
CUEDC1-201ENST00000360238 INSRP06213 1382 aa35.51■■■■□ 3.27
CUEDC1-201ENST00000360238 SYNMO15061 1565 aa35.5■■■■□ 3.27
CUEDC1-201ENST00000360238 IFT172Q9UG01 1749 aa35.49■■■■□ 3.27
CUEDC1-201ENST00000360238 MYOM2P54296 1465 aa35.49■■■■□ 3.27
CUEDC1-201ENST00000360238 PPRC1Q5VV67 1664 aaKnown RBP35.48■■■■□ 3.27
CUEDC1-201ENST00000360238 PANK3Q9H999 370 aa35.48■■■■□ 3.27
CUEDC1-201ENST00000360238 MAP3K4Q9Y6R4 1608 aa35.48■■■■□ 3.27
CUEDC1-201ENST00000360238 MYT1LQ9UL68 1186 aa35.46■■■■□ 3.27
CUEDC1-201ENST00000360238 EIF3AQ14152 1382 aaKnown RBP35.43■■■■□ 3.26
CUEDC1-201ENST00000360238 ABCA6Q8N139 1617 aa35.42■■■■□ 3.26
CUEDC1-201ENST00000360238 CDCA8Q53HL2 280 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms