RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ABCC1P33527 1531 aa20.12■□□□□ 0.81
UBAP1-202ENST00000359544 NAIPQ13075 1403 aa20.11■□□□□ 0.81
UBAP1-202ENST00000359544 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
UBAP1-202ENST00000359544 KDM4FA0A1W2PPD8 638 aa20.1■□□□□ 0.81
UBAP1-202ENST00000359544 ARID4BQ4LE39 1312 aaPredicted RBP20.09■□□□□ 0.81
UBAP1-202ENST00000359544 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
UBAP1-202ENST00000359544 RNF123Q5XPI4 1314 aa20.09■□□□□ 0.81
UBAP1-202ENST00000359544 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
UBAP1-202ENST00000359544 PTPRKQ15262 1439 aa20.07■□□□□ 0.8
UBAP1-202ENST00000359544 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
UBAP1-202ENST00000359544 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
UBAP1-202ENST00000359544 ITSN2Q9NZM3 1697 aa20.06■□□□□ 0.8
UBAP1-202ENST00000359544 MLECQ14165 292 aa20.05■□□□□ 0.8
UBAP1-202ENST00000359544 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
UBAP1-202ENST00000359544 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
UBAP1-202ENST00000359544 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
UBAP1-202ENST00000359544 ZFYVE16Q7Z3T8 1539 aa20.04■□□□□ 0.8
UBAP1-202ENST00000359544 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.8
UBAP1-202ENST00000359544 SIGLEC1Q9BZZ2 1709 aa20.02■□□□□ 0.8
UBAP1-202ENST00000359544 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.8
UBAP1-202ENST00000359544 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
UBAP1-202ENST00000359544 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
UBAP1-202ENST00000359544 ARHGEF40Q8TER5 1519 aa20.01■□□□□ 0.79
UBAP1-202ENST00000359544 KDM5CP41229 1560 aa20.01■□□□□ 0.79
UBAP1-202ENST00000359544 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
UBAP1-202ENST00000359544 C11orf95C9JLR9 678 aaPredicted RBP20■□□□□ 0.79
UBAP1-202ENST00000359544 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
UBAP1-202ENST00000359544 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
UBAP1-202ENST00000359544 HECW2Q9P2P5 1572 aa19.97■□□□□ 0.79
UBAP1-202ENST00000359544 PLEKHH2Q8IVE3 1493 aa19.97■□□□□ 0.79
UBAP1-202ENST00000359544 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
UBAP1-202ENST00000359544 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
UBAP1-202ENST00000359544 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
UBAP1-202ENST00000359544 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
UBAP1-202ENST00000359544 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
UBAP1-202ENST00000359544 NEFMP07197 916 aa19.96■□□□□ 0.79
UBAP1-202ENST00000359544 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
UBAP1-202ENST00000359544 ATP10AO60312 1499 aa19.95■□□□□ 0.78
UBAP1-202ENST00000359544 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
UBAP1-202ENST00000359544 RTN4Q9NQC3 1192 aaKnown RBP19.95■□□□□ 0.78
UBAP1-202ENST00000359544 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
UBAP1-202ENST00000359544 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
UBAP1-202ENST00000359544 MIA2Q96PC5 1412 aa19.93■□□□□ 0.78
UBAP1-202ENST00000359544 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
UBAP1-202ENST00000359544 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
UBAP1-202ENST00000359544 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
UBAP1-202ENST00000359544 UBE2Q2Q8WVN8 375 aa19.91■□□□□ 0.78
UBAP1-202ENST00000359544 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
UBAP1-202ENST00000359544 KIF7Q2M1P5 1343 aa19.9■□□□□ 0.78
UBAP1-202ENST00000359544 TSPY4P0CV99 314 aa19.9■□□□□ 0.78
UBAP1-202ENST00000359544 TSPY10P0CW01 314 aa19.9■□□□□ 0.78
UBAP1-202ENST00000359544 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
UBAP1-202ENST00000359544 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
UBAP1-202ENST00000359544 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
UBAP1-202ENST00000359544 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
UBAP1-202ENST00000359544 LAS1LQ9Y4W2 734 aaKnown RBP19.86■□□□□ 0.77
UBAP1-202ENST00000359544 ABCC5O15440 1437 aa19.86■□□□□ 0.77
UBAP1-202ENST00000359544 MS4A1P11836 297 aa19.86■□□□□ 0.77
UBAP1-202ENST00000359544 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
UBAP1-202ENST00000359544 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.84■□□□□ 0.77
UBAP1-202ENST00000359544 BCORL1Q5H9F3 1711 aa19.84■□□□□ 0.77
UBAP1-202ENST00000359544 ARHGEF5Q12774 1597 aa19.84■□□□□ 0.77
UBAP1-202ENST00000359544 PDE4AP27815 886 aa19.83■□□□□ 0.77
UBAP1-202ENST00000359544 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
UBAP1-202ENST00000359544 GGT6Q6P531 493 aa19.83■□□□□ 0.77
UBAP1-202ENST00000359544 MADDQ8WXG6 1647 aa19.83■□□□□ 0.77
UBAP1-202ENST00000359544 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.76
UBAP1-202ENST00000359544 A2MP01023 1474 aa19.82■□□□□ 0.76
UBAP1-202ENST00000359544 DAPK1P53355 1430 aa19.82■□□□□ 0.76
UBAP1-202ENST00000359544 MPHOSPH9Q99550 1183 aa19.82■□□□□ 0.76
UBAP1-202ENST00000359544 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
UBAP1-202ENST00000359544 DHX29Q7Z478 1369 aaKnown RBP19.82■□□□□ 0.76
UBAP1-202ENST00000359544 CEBPAP49715 358 aaPredicted RBP19.81■□□□□ 0.76
UBAP1-202ENST00000359544 DDRGK1Q96HY6 314 aa19.81■□□□□ 0.76
UBAP1-202ENST00000359544 BACH2Q9BYV9 841 aa19.81■□□□□ 0.76
UBAP1-202ENST00000359544 ADAMTSL3P82987 1691 aa19.8■□□□□ 0.76
UBAP1-202ENST00000359544 KIF3BO15066 747 aa19.79■□□□□ 0.76
UBAP1-202ENST00000359544 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
UBAP1-202ENST00000359544 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
UBAP1-202ENST00000359544 GSE1Q14687 1217 aa19.77■□□□□ 0.76
UBAP1-202ENST00000359544 NBPF8Q3BBV2 869 aa19.77■□□□□ 0.76
UBAP1-202ENST00000359544 RIMS1Q86UR5 1692 aaKnown RBP19.77■□□□□ 0.76
UBAP1-202ENST00000359544 ADGBQ8N7X0 1667 aa19.77■□□□□ 0.76
UBAP1-202ENST00000359544 DNMT1P26358 1616 aaKnown RBP19.77■□□□□ 0.75
UBAP1-202ENST00000359544 PTPRMP28827 1452 aa19.76■□□□□ 0.75
UBAP1-202ENST00000359544 PNISRQ8TF01 805 aaKnown RBP19.74■□□□□ 0.75
UBAP1-202ENST00000359544 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
UBAP1-202ENST00000359544 PLXNC1O60486 1568 aa19.74■□□□□ 0.75
UBAP1-202ENST00000359544 REREQ9P2R6 1566 aa19.74■□□□□ 0.75
UBAP1-202ENST00000359544 KIF15Q9NS87 1388 aa19.73■□□□□ 0.75
UBAP1-202ENST00000359544 CROCC2H7BZ55 1655 aa19.72■□□□□ 0.75
UBAP1-202ENST00000359544 AGLP35573 1532 aa19.72■□□□□ 0.75
UBAP1-202ENST00000359544 EXOC6Q8TAG9 804 aa19.72■□□□□ 0.75
UBAP1-202ENST00000359544 ESF1Q9H501 851 aaKnown RBP19.72■□□□□ 0.75
UBAP1-202ENST00000359544 FER1L4A9Z1Z3 1794 aa19.71■□□□□ 0.75
UBAP1-202ENST00000359544 BRPF3Q9ULD4 1205 aa19.71■□□□□ 0.75
UBAP1-202ENST00000359544 MAST1Q9Y2H9 1570 aa19.71■□□□□ 0.75
UBAP1-202ENST00000359544 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
UBAP1-202ENST00000359544 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
UBAP1-202ENST00000359544 LRPPRCP42704 1394 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms