RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 CNTLNQ9NXG0 1405 aa36.66■■■■□ 3.46
ALKAL1-201ENST00000358543 FAM135AQ9P2D6 1515 aa36.63■■■■□ 3.45
ALKAL1-201ENST00000358543 PTPRMP28827 1452 aa36.62■■■■□ 3.45
ALKAL1-201ENST00000358543 RIMS1Q86UR5 1692 aaKnown RBP36.62■■■■□ 3.45
ALKAL1-201ENST00000358543 HFM1A2PYH4 1435 aa36.61■■■■□ 3.45
ALKAL1-201ENST00000358543 NAIPQ13075 1403 aa36.61■■■■□ 3.45
ALKAL1-201ENST00000358543 DEPDC5O75140 1603 aa36.58■■■■□ 3.45
ALKAL1-201ENST00000358543 MROH1Q8NDA8 1641 aa36.58■■■■□ 3.45
ALKAL1-201ENST00000358543 WASHC2CQ9Y4E1 1318 aa36.58■■■■□ 3.45
ALKAL1-201ENST00000358543 PRDM15P57071 1507 aaPredicted RBP36.55■■■■□ 3.44
ALKAL1-201ENST00000358543 KDM5DQ9BY66 1539 aa36.54■■■■□ 3.44
ALKAL1-201ENST00000358543 GCC2Q8IWJ2 1684 aa36.53■■■■□ 3.44
ALKAL1-201ENST00000358543 MROH2AA6NES4 1674 aa36.52■■■■□ 3.44
ALKAL1-201ENST00000358543 ZMYM3Q14202 1370 aa36.52■■■■□ 3.44
ALKAL1-201ENST00000358543 CLTCQ00610 1675 aaKnown RBP36.51■■■■□ 3.44
ALKAL1-201ENST00000358543 AEBP2Q6ZN18 517 aaPredicted RBP36.51■■■■□ 3.44
ALKAL1-201ENST00000358543 KANK1Q14678 1352 aa36.51■■■■□ 3.43
ALKAL1-201ENST00000358543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.5■■■■□ 3.43
ALKAL1-201ENST00000358543 ABCC3O15438 1527 aa36.48■■■■□ 3.43
ALKAL1-201ENST00000358543 ZC3H13Q5T200 1668 aaKnown RBP36.48■■■■□ 3.43
ALKAL1-201ENST00000358543 VWDEQ8N2E2 1590 aa36.46■■■■□ 3.43
ALKAL1-201ENST00000358543 UNC13BO14795 1591 aa36.45■■■■□ 3.43
ALKAL1-201ENST00000358543 CEBPAP49715 358 aaPredicted RBP36.45■■■■□ 3.43
ALKAL1-201ENST00000358543 C3P01024 1663 aa36.43■■■■□ 3.42
ALKAL1-201ENST00000358543 LMTK2Q8IWU2 1503 aa36.41■■■■□ 3.42
ALKAL1-201ENST00000358543 PLPPR3Q6T4P5 718 aa36.38■■■■□ 3.41
ALKAL1-201ENST00000358543 SETD5Q9C0A6 1442 aa36.38■■■■□ 3.41
ALKAL1-201ENST00000358543 CEP152O94986 1710 aa36.37■■■■□ 3.41
ALKAL1-201ENST00000358543 NUP155O75694 1391 aa36.37■■■■□ 3.41
ALKAL1-201ENST00000358543 TRIM26Q12899 539 aaPredicted RBP36.36■■■■□ 3.41
ALKAL1-201ENST00000358543 PZPP20742 1482 aa36.35■■■■□ 3.41
ALKAL1-201ENST00000358543 ARHGAP31Q2M1Z3 1444 aa36.34■■■■□ 3.41
ALKAL1-201ENST00000358543 NPATQ14207 1427 aa36.34■■■■□ 3.41
ALKAL1-201ENST00000358543 ACIN1Q9UKV3 1341 aaKnown RBP36.34■■■■□ 3.41
ALKAL1-201ENST00000358543 CAMSAP1Q5T5Y3 1602 aa36.33■■■■□ 3.41
ALKAL1-201ENST00000358543 SETD1BQ9UPS6 1966 aaKnown RBP36.32■■■■□ 3.4
ALKAL1-201ENST00000358543 IQGAP3Q86VI3 1631 aa36.3■■■■□ 3.4
ALKAL1-201ENST00000358543 FBXO31Q5XUX0 539 aaPredicted RBP36.26■■■■□ 3.4
ALKAL1-201ENST00000358543 HRCP23327 699 aa36.25■■■■□ 3.39
ALKAL1-201ENST00000358543 TET3O43151 1660 aa36.25■■■■□ 3.39
ALKAL1-201ENST00000358543 EFCAB6Q5THR3 1501 aa36.24■■■■□ 3.39
ALKAL1-201ENST00000358543 TRIM52Q96A61 297 aa36.24■■■■□ 3.39
ALKAL1-201ENST00000358543 RAB3GAP2Q9H2M9 1393 aa36.24■■■■□ 3.39
ALKAL1-201ENST00000358543 RPRD2Q5VT52 1461 aaKnown RBP36.21■■■■□ 3.39
ALKAL1-201ENST00000358543 SPATA31D1Q6ZQQ2 1576 aa36.18■■■■□ 3.38
ALKAL1-201ENST00000358543 ERVK-7P63135 1459 aa36.18■■■■□ 3.38
ALKAL1-201ENST00000358543 TNRQ92752 1358 aa36.16■■■■□ 3.38
ALKAL1-201ENST00000358543 PREX1Q8TCU6 1659 aa36.14■■■■□ 3.38
ALKAL1-201ENST00000358543 CFAP65Q6ZU64 1925 aaKnown RBP36.13■■■■□ 3.37
ALKAL1-201ENST00000358543 UHRF1BP1Q6BDS2 1440 aa36.13■■■■□ 3.37
ALKAL1-201ENST00000358543 NOS1P29475 1434 aa36.1■■■■□ 3.37
ALKAL1-201ENST00000358543 SLC4A1APQ9BWU0 796 aaKnown RBP36.1■■■■□ 3.37
ALKAL1-201ENST00000358543 E9PCH4 1651 aa36.1■■■■□ 3.37
ALKAL1-201ENST00000358543 LMTK3Q96Q04 1460 aa36.09■■■■□ 3.37
ALKAL1-201ENST00000358543 NLRP1Q9C000 1473 aa36.05■■■■□ 3.36
ALKAL1-201ENST00000358543 MPHOSPH9Q99550 1183 aa36.05■■■■□ 3.36
ALKAL1-201ENST00000358543 MYO3AQ8NEV4 1616 aa36.05■■■■□ 3.36
ALKAL1-201ENST00000358543 PKD2Q13563 968 aa36.04■■■■□ 3.36
ALKAL1-201ENST00000358543 A2ML1A8K2U0 1454 aa36■■■■□ 3.35
ALKAL1-201ENST00000358543 SLC52A1Q9NWF4 448 aa35.99■■■■□ 3.35
ALKAL1-201ENST00000358543 CEP170BQ9Y4F5 1589 aaPredicted RBP35.98■■■■□ 3.35
ALKAL1-201ENST00000358543 ZNF142P52746 1687 aaPredicted RBP35.98■■■■□ 3.35
ALKAL1-201ENST00000358543 PTPRTO14522 1441 aa35.98■■■■□ 3.35
ALKAL1-201ENST00000358543 SYNMO15061 1565 aa35.98■■■■□ 3.35
ALKAL1-201ENST00000358543 IDI1Q13907 227 aa35.94■■■■□ 3.34
ALKAL1-201ENST00000358543 HSPA2P54652 639 aa35.91■■■■□ 3.34
ALKAL1-201ENST00000358543 SPHKAPQ2M3C7 1700 aa35.89■■■■□ 3.34
ALKAL1-201ENST00000358543 THEMISQ8N1K5 641 aaPredicted RBP35.88■■■■□ 3.33
ALKAL1-201ENST00000358543 UGGT1Q9NYU2 1555 aa35.88■■■■□ 3.33
ALKAL1-201ENST00000358543 PIK3C2BO00750 1634 aa35.86■■■■□ 3.33
ALKAL1-201ENST00000358543 PLA2R1Q13018 1463 aa35.86■■■■□ 3.33
ALKAL1-201ENST00000358543 FOXD1Q16676 465 aa35.85■■■■□ 3.33
ALKAL1-201ENST00000358543 TRPM2O94759 1503 aa35.84■■■■□ 3.33
ALKAL1-201ENST00000358543 PCGF6Q9BYE7 350 aa35.83■■■■□ 3.33
ALKAL1-201ENST00000358543 KDM5AP29375 1690 aaKnown RBP35.81■■■■□ 3.32
ALKAL1-201ENST00000358543 UBR1Q8IWV7 1749 aa35.8■■■■□ 3.32
ALKAL1-201ENST00000358543 STAG3Q9UJ98 1225 aa35.8■■■■□ 3.32
ALKAL1-201ENST00000358543 ADGRB3O60242 1522 aa35.75■■■■□ 3.31
ALKAL1-201ENST00000358543 CLTCL1P53675 1640 aa35.72■■■■□ 3.31
ALKAL1-201ENST00000358543 TMEM131LA2VDJ0 1609 aa35.71■■■■□ 3.31
ALKAL1-201ENST00000358543 ANKRD30BQ9BXX2 1392 aa35.69■■■■□ 3.3
ALKAL1-201ENST00000358543 SLIT1O75093 1534 aa35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 ARHGAP23Q9P227 1491 aa35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 CCDC144AA2RUR9 1427 aa35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 TMEM2Q9UHN6 1383 aa35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 ANKLE2Q86XL3 938 aa35.68■■■■□ 3.3
ALKAL1-201ENST00000358543 STRCQ7RTU9 1775 aa35.66■■■■□ 3.3
ALKAL1-201ENST00000358543 NCKAP5LQ9HCH0 1330 aa35.63■■■■□ 3.29
ALKAL1-201ENST00000358543 DMRT2Q9Y5R5 561 aa35.63■■■■□ 3.29
ALKAL1-201ENST00000358543 KIF1BO60333 1816 aa35.62■■■■□ 3.29
ALKAL1-201ENST00000358543 MYO5BQ9ULV0 1848 aa35.61■■■■□ 3.29
ALKAL1-201ENST00000358543 HDGFP51858 240 aaKnown RBP35.6■■■■□ 3.29
ALKAL1-201ENST00000358543 EID1Q9Y6B2 187 aa35.6■■■■□ 3.29
ALKAL1-201ENST00000358543 DHX57Q6P158 1386 aaKnown RBP35.6■■■■□ 3.29
ALKAL1-201ENST00000358543 TXNDC2Q86VQ3 553 aa35.59■■■■□ 3.29
ALKAL1-201ENST00000358543 LTKP29376 864 aa35.58■■■■□ 3.29
ALKAL1-201ENST00000358543 SCAF11Q99590 1463 aaKnown RBP35.56■■■■□ 3.28
ALKAL1-201ENST00000358543 ZFYVE9O95405 1425 aa35.56■■■■□ 3.28
ALKAL1-201ENST00000358543 MED14O60244 1454 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms