RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 MAGI2Q86UL8 1455 aa31.62■■■□□ 2.65
POLR2J2-202ENST00000358438 GLI2P10070 1586 aa31.61■■■□□ 2.65
POLR2J2-202ENST00000358438 IQGAP3Q86VI3 1631 aa31.61■■■□□ 2.65
POLR2J2-202ENST00000358438 KIF13AQ9H1H9 1805 aa31.59■■■□□ 2.65
POLR2J2-202ENST00000358438 NEO1Q92859 1461 aa31.59■■■□□ 2.65
POLR2J2-202ENST00000358438 TSHZ2Q9NRE2 1034 aa31.58■■■□□ 2.65
POLR2J2-202ENST00000358438 POGZQ7Z3K3 1410 aa31.57■■■□□ 2.64
POLR2J2-202ENST00000358438 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
POLR2J2-202ENST00000358438 KIDINS220Q9ULH0 1771 aa31.55■■■□□ 2.64
POLR2J2-202ENST00000358438 L3MBTL2Q969R5 705 aa31.55■■■□□ 2.64
POLR2J2-202ENST00000358438 KDM5CP41229 1560 aa31.55■■■□□ 2.64
POLR2J2-202ENST00000358438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.55■■■□□ 2.64
POLR2J2-202ENST00000358438 TSPOAP1O95153 1857 aa31.53■■■□□ 2.64
POLR2J2-202ENST00000358438 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
POLR2J2-202ENST00000358438 DEPDC5O75140 1603 aa31.49■■■□□ 2.63
POLR2J2-202ENST00000358438 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
POLR2J2-202ENST00000358438 DHX29Q7Z478 1369 aaKnown RBP31.46■■■□□ 2.63
POLR2J2-202ENST00000358438 MLH3Q9UHC1 1453 aa31.46■■■□□ 2.63
POLR2J2-202ENST00000358438 HECW2Q9P2P5 1572 aa31.46■■■□□ 2.63
POLR2J2-202ENST00000358438 BCL11AQ9H165 835 aa31.44■■■□□ 2.62
POLR2J2-202ENST00000358438 RICTORQ6R327 1708 aa31.38■■■□□ 2.61
POLR2J2-202ENST00000358438 PPRC1Q5VV67 1664 aaKnown RBP31.38■■■□□ 2.61
POLR2J2-202ENST00000358438 A2MP01023 1474 aa31.37■■■□□ 2.61
POLR2J2-202ENST00000358438 KIF3BO15066 747 aa31.36■■■□□ 2.61
POLR2J2-202ENST00000358438 RAPGEF3O95398 923 aa31.36■■■□□ 2.61
POLR2J2-202ENST00000358438 PLA2R1Q13018 1463 aa31.36■■■□□ 2.61
POLR2J2-202ENST00000358438 PRDM15P57071 1507 aaPredicted RBP31.36■■■□□ 2.61
POLR2J2-202ENST00000358438 VWDEQ8N2E2 1590 aa31.35■■■□□ 2.61
POLR2J2-202ENST00000358438 CCDC144AA2RUR9 1427 aa31.34■■■□□ 2.61
POLR2J2-202ENST00000358438 ABCA6Q8N139 1617 aa31.34■■■□□ 2.61
POLR2J2-202ENST00000358438 MROH1Q8NDA8 1641 aa31.34■■■□□ 2.61
POLR2J2-202ENST00000358438 ATP10AO60312 1499 aa31.33■■■□□ 2.61
POLR2J2-202ENST00000358438 E9PCH4 1651 aa31.32■■■□□ 2.6
POLR2J2-202ENST00000358438 KANK1Q14678 1352 aa31.32■■■□□ 2.6
POLR2J2-202ENST00000358438 TET3O43151 1660 aa31.31■■■□□ 2.6
POLR2J2-202ENST00000358438 FRMPD1Q5SYB0 1578 aa31.31■■■□□ 2.6
POLR2J2-202ENST00000358438 NBPF8Q3BBV2 869 aa31.31■■■□□ 2.6
POLR2J2-202ENST00000358438 RNF17Q9BXT8 1623 aaKnown RBP31.28■■■□□ 2.6
POLR2J2-202ENST00000358438 HIRIP3Q9BW71 556 aaPredicted RBP31.28■■■□□ 2.6
POLR2J2-202ENST00000358438 BCORL1Q5H9F3 1711 aa31.25■■■□□ 2.59
POLR2J2-202ENST00000358438 DIP2CQ9Y2E4 1556 aa31.25■■■□□ 2.59
POLR2J2-202ENST00000358438 SPHKAPQ2M3C7 1700 aa31.21■■■□□ 2.59
POLR2J2-202ENST00000358438 UHRF1BP1Q6BDS2 1440 aa31.21■■■□□ 2.59
POLR2J2-202ENST00000358438 TRPM2O94759 1503 aa31.19■■■□□ 2.58
POLR2J2-202ENST00000358438 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
POLR2J2-202ENST00000358438 PTPRTO14522 1441 aa31.17■■■□□ 2.58
POLR2J2-202ENST00000358438 EIF4G2P78344 907 aaKnown RBP eCLIP31.17■■■□□ 2.58
POLR2J2-202ENST00000358438 LMTK2Q8IWU2 1503 aa31.17■■■□□ 2.58
POLR2J2-202ENST00000358438 EFCAB6Q5THR3 1501 aa31.16■■■□□ 2.58
POLR2J2-202ENST00000358438 HSPA5P11021 654 aaKnown RBP31.15■■■□□ 2.58
POLR2J2-202ENST00000358438 YEATS2Q9ULM3 1422 aa31.15■■■□□ 2.58
POLR2J2-202ENST00000358438 CEP152O94986 1710 aa31.15■■■□□ 2.58
POLR2J2-202ENST00000358438 ZNF326Q5BKZ1 582 aaKnown RBP31.14■■■□□ 2.58
POLR2J2-202ENST00000358438 DCAF11Q8TEB1 546 aa31.14■■■□□ 2.58
POLR2J2-202ENST00000358438 COL17A1Q9UMD9 1497 aaPredicted RBP31.13■■■□□ 2.57
POLR2J2-202ENST00000358438 KDM2AQ9Y2K7 1162 aa31.1■■■□□ 2.57
POLR2J2-202ENST00000358438 RALGAPBQ86X10 1494 aa31.09■■■□□ 2.57
POLR2J2-202ENST00000358438 RGL3Q3MIN7 710 aa31.09■■■□□ 2.57
POLR2J2-202ENST00000358438 GGT6Q6P531 493 aa31.09■■■□□ 2.57
POLR2J2-202ENST00000358438 CLTCL1P53675 1640 aa31.08■■■□□ 2.57
POLR2J2-202ENST00000358438 SPATA31E1Q6ZUB1 1445 aa31.06■■■□□ 2.56
POLR2J2-202ENST00000358438 DDX10Q13206 875 aaKnown RBP31.06■■■□□ 2.56
POLR2J2-202ENST00000358438 ABCC3O15438 1527 aa31.03■■■□□ 2.56
POLR2J2-202ENST00000358438 PRAG1Q86YV5 1406 aa31.02■■■□□ 2.56
POLR2J2-202ENST00000358438 WASHC2CQ9Y4E1 1318 aa30.99■■■□□ 2.55
POLR2J2-202ENST00000358438 TRPM1Q7Z4N2 1603 aa30.98■■■□□ 2.55
POLR2J2-202ENST00000358438 NPATQ14207 1427 aa30.97■■■□□ 2.55
POLR2J2-202ENST00000358438 CAMSAP1Q5T5Y3 1602 aa30.97■■■□□ 2.55
POLR2J2-202ENST00000358438 USP47Q96K76 1375 aa30.97■■■□□ 2.55
POLR2J2-202ENST00000358438 ZC3H13Q5T200 1668 aaKnown RBP30.96■■■□□ 2.55
POLR2J2-202ENST00000358438 REREQ9P2R6 1566 aa30.96■■■□□ 2.55
POLR2J2-202ENST00000358438 NEURL4Q96JN8 1562 aa30.95■■■□□ 2.55
POLR2J2-202ENST00000358438 UGGT1Q9NYU2 1555 aa30.94■■■□□ 2.54
POLR2J2-202ENST00000358438 WASHC2AQ641Q2 1341 aa30.94■■■□□ 2.54
POLR2J2-202ENST00000358438 CARD11Q9BXL7 1154 aa30.92■■■□□ 2.54
POLR2J2-202ENST00000358438 POLR1AO95602 1720 aaPredicted RBP30.91■■■□□ 2.54
POLR2J2-202ENST00000358438 KIF1BO60333 1816 aa30.91■■■□□ 2.54
POLR2J2-202ENST00000358438 ROCK2O75116 1388 aaKnown RBP30.9■■■□□ 2.54
POLR2J2-202ENST00000358438 CFAP65Q6ZU64 1925 aaKnown RBP30.89■■■□□ 2.53
POLR2J2-202ENST00000358438 AGLP35573 1532 aa30.88■■■□□ 2.53
POLR2J2-202ENST00000358438 CNTLNQ9NXG0 1405 aa30.87■■■□□ 2.53
POLR2J2-202ENST00000358438 ARHGEF40Q8TER5 1519 aa30.86■■■□□ 2.53
POLR2J2-202ENST00000358438 C11orf95C9JLR9 678 aaPredicted RBP30.86■■■□□ 2.53
POLR2J2-202ENST00000358438 ARHGAP31Q2M1Z3 1444 aa30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 CCDC7Q96M83 1385 aa30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 SIGLEC1Q9BZZ2 1709 aa30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 STAC3Q96MF2 364 aa30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 RBM19Q9Y4C8 960 aaKnown RBP30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 MADDQ8WXG6 1647 aa30.85■■■□□ 2.53
POLR2J2-202ENST00000358438 LAMC1P11047 1609 aa30.84■■■□□ 2.53
POLR2J2-202ENST00000358438 GPRASP1Q5JY77 1395 aa30.84■■■□□ 2.53
POLR2J2-202ENST00000358438 FKBP8Q14318 412 aa30.82■■■□□ 2.52
POLR2J2-202ENST00000358438 MROH2AA6NES4 1674 aa30.81■■■□□ 2.52
POLR2J2-202ENST00000358438 NOS1P29475 1434 aa30.81■■■□□ 2.52
POLR2J2-202ENST00000358438 NBPF1Q3BBV0 1214 aa30.8■■■□□ 2.52
POLR2J2-202ENST00000358438 NEFLP07196 543 aa30.79■■■□□ 2.52
POLR2J2-202ENST00000358438 ADGRB3O60242 1522 aa30.79■■■□□ 2.52
POLR2J2-202ENST00000358438 KIF7Q2M1P5 1343 aa30.78■■■□□ 2.52
POLR2J2-202ENST00000358438 IFT172Q9UG01 1749 aa30.77■■■□□ 2.52
POLR2J2-202ENST00000358438 SYNMO15061 1565 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms