RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 KDM2BQ8NHM5 1336 aa14.59□□□□□ -0.07
CNOT3-202ENST00000358389 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
CNOT3-202ENST00000358389 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
CNOT3-202ENST00000358389 MIA2Q96PC5 1412 aa14.58□□□□□ -0.07
CNOT3-202ENST00000358389 ADAMTS8Q9UP79 889 aa14.58□□□□□ -0.08
CNOT3-202ENST00000358389 MRE11P49959 708 aa14.58□□□□□ -0.08
CNOT3-202ENST00000358389 MCM4P33991 863 aa14.57□□□□□ -0.08
CNOT3-202ENST00000358389 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
CNOT3-202ENST00000358389 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
CNOT3-202ENST00000358389 CFAP43Q8NDM7 1665 aa14.56□□□□□ -0.08
CNOT3-202ENST00000358389 ZNF644Q9H582 1327 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-202ENST00000358389 FAM13BQ9NYF5 915 aa14.56□□□□□ -0.08
CNOT3-202ENST00000358389 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
CNOT3-202ENST00000358389 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
CNOT3-202ENST00000358389 GRPEL1Q9HAV7 217 aa14.55□□□□□ -0.08
CNOT3-202ENST00000358389 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
CNOT3-202ENST00000358389 BCAR3O75815 825 aa14.54□□□□□ -0.08
CNOT3-202ENST00000358389 PANK3Q9H999 370 aa14.54□□□□□ -0.08
CNOT3-202ENST00000358389 MFAP1P55081 439 aaKnown RBP14.54□□□□□ -0.08
CNOT3-202ENST00000358389 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
CNOT3-202ENST00000358389 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
CNOT3-202ENST00000358389 IGHDP01880 384 aa14.53□□□□□ -0.08
CNOT3-202ENST00000358389 MSNP26038 577 aaKnown RBP14.52□□□□□ -0.08
CNOT3-202ENST00000358389 DENND4BO75064 1496 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-202ENST00000358389 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
CNOT3-202ENST00000358389 CHMP5Q9NZZ3 219 aa14.51□□□□□ -0.09
CNOT3-202ENST00000358389 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
CNOT3-202ENST00000358389 TPM2P07951 284 aa14.51□□□□□ -0.09
CNOT3-202ENST00000358389 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
CNOT3-202ENST00000358389 HSCBQ8IWL3 235 aa14.5□□□□□ -0.09
CNOT3-202ENST00000358389 PDCL3Q9H2J4 239 aa14.5□□□□□ -0.09
CNOT3-202ENST00000358389 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
CNOT3-202ENST00000358389 ZBTB7CA1YPR0 619 aa14.5□□□□□ -0.09
CNOT3-202ENST00000358389 DUSP27Q5VZP5 1158 aa14.49□□□□□ -0.09
CNOT3-202ENST00000358389 KNSTRNQ9Y448 316 aa14.49□□□□□ -0.09
CNOT3-202ENST00000358389 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
CNOT3-202ENST00000358389 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
CNOT3-202ENST00000358389 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
CNOT3-202ENST00000358389 KDM6BO15054 1643 aa14.47□□□□□ -0.09
CNOT3-202ENST00000358389 DDX11L8A8MPP1 907 aa14.47□□□□□ -0.09
CNOT3-202ENST00000358389 APAF1O14727 1248 aa14.47□□□□□ -0.09
CNOT3-202ENST00000358389 R3HCC1Q9Y3T6 440 aaKnown RBP14.46□□□□□ -0.09
CNOT3-202ENST00000358389 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.1
CNOT3-202ENST00000358389 USP19O94966 1318 aa14.46□□□□□ -0.1
CNOT3-202ENST00000358389 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
CNOT3-202ENST00000358389 FSD2A1L4K1 749 aa14.45□□□□□ -0.1
CNOT3-202ENST00000358389 BCL2L13Q9BXK5 485 aa14.45□□□□□ -0.1
CNOT3-202ENST00000358389 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 C22orf23Q9BZE7 217 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 RAD54L2Q9Y4B4 1467 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 NUP155O75694 1391 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
CNOT3-202ENST00000358389 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
CNOT3-202ENST00000358389 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
CNOT3-202ENST00000358389 TBC1D32Q96NH3 1257 aa14.42□□□□□ -0.1
CNOT3-202ENST00000358389 GBP4Q96PP9 640 aa14.42□□□□□ -0.1
CNOT3-202ENST00000358389 CENPJQ9HC77 1338 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-202ENST00000358389 PRDM10Q9NQV6 1147 aa14.42□□□□□ -0.1
CNOT3-202ENST00000358389 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
CNOT3-202ENST00000358389 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
CNOT3-202ENST00000358389 TMF1P82094 1093 aa14.41□□□□□ -0.1
CNOT3-202ENST00000358389 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
CNOT3-202ENST00000358389 PARD3Q8TEW0 1356 aa14.4□□□□□ -0.1
CNOT3-202ENST00000358389 PLEKHH1Q9ULM0 1364 aa14.4□□□□□ -0.1
CNOT3-202ENST00000358389 GOLGA6L22H0YM25 854 aa14.4□□□□□ -0.1
CNOT3-202ENST00000358389 SLFN5Q08AF3 891 aa14.4□□□□□ -0.1
CNOT3-202ENST00000358389 PMFBP1Q8TBY8 1022 aa14.4□□□□□ -0.1
CNOT3-202ENST00000358389 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-202ENST00000358389 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
CNOT3-202ENST00000358389 BCORL1Q5H9F3 1711 aa14.39□□□□□ -0.11
CNOT3-202ENST00000358389 ZHX1Q9UKY1 873 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-202ENST00000358389 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-202ENST00000358389 TDRD9Q8NDG6 1382 aaKnown RBP14.38□□□□□ -0.11
CNOT3-202ENST00000358389 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
CNOT3-202ENST00000358389 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
CNOT3-202ENST00000358389 PER1O15534 1290 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-202ENST00000358389 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-202ENST00000358389 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
CNOT3-202ENST00000358389 KIAA1107Q9UPP5 1409 aa14.37□□□□□ -0.11
CNOT3-202ENST00000358389 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
CNOT3-202ENST00000358389 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
CNOT3-202ENST00000358389 ABCA5Q8WWZ7 1642 aa14.36□□□□□ -0.11
CNOT3-202ENST00000358389 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
CNOT3-202ENST00000358389 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
CNOT3-202ENST00000358389 E9PSI1 815 aa14.36□□□□□ -0.11
CNOT3-202ENST00000358389 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
CNOT3-202ENST00000358389 GAS2L3Q86XJ1 694 aa14.36□□□□□ -0.11
CNOT3-202ENST00000358389 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
CNOT3-202ENST00000358389 DAPK1P53355 1430 aa14.36□□□□□ -0.11
CNOT3-202ENST00000358389 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
CNOT3-202ENST00000358389 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
CNOT3-202ENST00000358389 UQCRHP07919 91 aa14.34□□□□□ -0.11
CNOT3-202ENST00000358389 CCDC173Q0VFZ6 552 aa14.34□□□□□ -0.11
CNOT3-202ENST00000358389 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
CNOT3-202ENST00000358389 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
CNOT3-202ENST00000358389 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
CNOT3-202ENST00000358389 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
CNOT3-202ENST00000358389 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
CNOT3-202ENST00000358389 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms