RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.153e-7■■■■■ 28.6
CCNE1-202ENST00000357943 RNF17Q9BXT8 1623 aaKnown RBP22.19■■□□□ 1.14
CCNE1-202ENST00000357943 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
CCNE1-202ENST00000357943 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
CCNE1-202ENST00000357943 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
CCNE1-202ENST00000357943 TRIM52Q96A61 297 aa22.15■■□□□ 1.14
CCNE1-202ENST00000357943 UNC13BO14795 1591 aa22.15■■□□□ 1.14
CCNE1-202ENST00000357943 NUP155O75694 1391 aa22.15■■□□□ 1.14
CCNE1-202ENST00000357943 WASHC2CQ9Y4E1 1318 aa22.13■■□□□ 1.13
CCNE1-202ENST00000357943 HRCP23327 699 aa22.13■■□□□ 1.13
CCNE1-202ENST00000357943 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
CCNE1-202ENST00000357943 KANK1Q14678 1352 aa22.12■■□□□ 1.13
CCNE1-202ENST00000357943 VWDEQ8N2E2 1590 aa22.1■■□□□ 1.13
CCNE1-202ENST00000357943 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
CCNE1-202ENST00000357943 ADAMTSL3P82987 1691 aa22.09■■□□□ 1.13
CCNE1-202ENST00000357943 ABCC3O15438 1527 aa22.09■■□□□ 1.13
CCNE1-202ENST00000357943 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
CCNE1-202ENST00000357943 MADDQ8WXG6 1647 aa22.07■■□□□ 1.12
CCNE1-202ENST00000357943 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
CCNE1-202ENST00000357943 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
CCNE1-202ENST00000357943 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
CCNE1-202ENST00000357943 PZPP20742 1482 aa22.06■■□□□ 1.12
CCNE1-202ENST00000357943 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
CCNE1-202ENST00000357943 CLTCQ00610 1675 aaKnown RBP22.05■■□□□ 1.12
CCNE1-202ENST00000357943 FER1L4A9Z1Z3 1794 aa22.05■■□□□ 1.12
CCNE1-202ENST00000357943 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
CCNE1-202ENST00000357943 CEP152O94986 1710 aa22.04■■□□□ 1.12
CCNE1-202ENST00000357943 SLC4A1APQ9BWU0 796 aaKnown RBP22.04■■□□□ 1.12
CCNE1-202ENST00000357943 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
CCNE1-202ENST00000357943 ZC3H13Q5T200 1668 aaKnown RBP22.03■■□□□ 1.12
CCNE1-202ENST00000357943 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
CCNE1-202ENST00000357943 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
CCNE1-202ENST00000357943 RIMS1Q86UR5 1692 aaKnown RBP22■■□□□ 1.11
CCNE1-202ENST00000357943 CEBPAP49715 358 aaPredicted RBP21.99■■□□□ 1.11
CCNE1-202ENST00000357943 CAMSAP1Q5T5Y3 1602 aa21.99■■□□□ 1.11
CCNE1-202ENST00000357943 NPATQ14207 1427 aa21.99■■□□□ 1.11
CCNE1-202ENST00000357943 PKD2Q13563 968 aa21.98■■□□□ 1.11
CCNE1-202ENST00000357943 EFCAB6Q5THR3 1501 aa21.98■■□□□ 1.11
CCNE1-202ENST00000357943 TET3O43151 1660 aa21.98■■□□□ 1.11
CCNE1-202ENST00000357943 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
CCNE1-202ENST00000357943 MROH2AA6NES4 1674 aa21.97■■□□□ 1.11
CCNE1-202ENST00000357943 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
CCNE1-202ENST00000357943 FOXD1Q16676 465 aa21.96■■□□□ 1.11
CCNE1-202ENST00000357943 PTPRMP28827 1452 aa21.95■■□□□ 1.11
CCNE1-202ENST00000357943 FBXO31Q5XUX0 539 aaPredicted RBP21.95■■□□□ 1.1
CCNE1-202ENST00000357943 E9PCH4 1651 aa21.93■■□□□ 1.1
CCNE1-202ENST00000357943 C3P01024 1663 aa21.93■■□□□ 1.1
CCNE1-202ENST00000357943 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
CCNE1-202ENST00000357943 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
CCNE1-202ENST00000357943 ERVK-7P63135 1459 aa21.88■■□□□ 1.09
CCNE1-202ENST00000357943 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
CCNE1-202ENST00000357943 NOS1P29475 1434 aa21.86■■□□□ 1.09
CCNE1-202ENST00000357943 SPATA31D1Q6ZQQ2 1576 aa21.86■■□□□ 1.09
CCNE1-202ENST00000357943 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
CCNE1-202ENST00000357943 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
CCNE1-202ENST00000357943 PTPRTO14522 1441 aa21.84■■□□□ 1.09
CCNE1-202ENST00000357943 TNRQ92752 1358 aa21.82■■□□□ 1.08
CCNE1-202ENST00000357943 SYNMO15061 1565 aa21.81■■□□□ 1.08
CCNE1-202ENST00000357943 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
CCNE1-202ENST00000357943 SPHKAPQ2M3C7 1700 aa21.8■■□□□ 1.08
CCNE1-202ENST00000357943 UGGT1Q9NYU2 1555 aa21.79■■□□□ 1.08
CCNE1-202ENST00000357943 TRPM2O94759 1503 aa21.79■■□□□ 1.08
CCNE1-202ENST00000357943 IDI1Q13907 227 aa21.77■■□□□ 1.08
CCNE1-202ENST00000357943 SLC52A1Q9NWF4 448 aa21.76■■□□□ 1.07
CCNE1-202ENST00000357943 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
CCNE1-202ENST00000357943 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
CCNE1-202ENST00000357943 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
CCNE1-202ENST00000357943 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
CCNE1-202ENST00000357943 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
CCNE1-202ENST00000357943 MYO3AQ8NEV4 1616 aa21.72■■□□□ 1.07
CCNE1-202ENST00000357943 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
CCNE1-202ENST00000357943 SETD1BQ9UPS6 1966 aaKnown RBP21.71■■□□□ 1.07
CCNE1-202ENST00000357943 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
CCNE1-202ENST00000357943 CHGAP10645 457 aaKnown RBP21.68■■□□□ 1.06
CCNE1-202ENST00000357943 A2ML1A8K2U0 1454 aa21.67■■□□□ 1.06
CCNE1-202ENST00000357943 CEP170BQ9Y4F5 1589 aaPredicted RBP21.67■■□□□ 1.06
CCNE1-202ENST00000357943 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
CCNE1-202ENST00000357943 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
CCNE1-202ENST00000357943 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
CCNE1-202ENST00000357943 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
CCNE1-202ENST00000357943 TMEM131LA2VDJ0 1609 aa21.63■■□□□ 1.05
CCNE1-202ENST00000357943 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
CCNE1-202ENST00000357943 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
CCNE1-202ENST00000357943 RGL3Q3MIN7 710 aa21.62■■□□□ 1.05
CCNE1-202ENST00000357943 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
CCNE1-202ENST00000357943 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
CCNE1-202ENST00000357943 UBR1Q8IWV7 1749 aa21.61■■□□□ 1.05
CCNE1-202ENST00000357943 THEMISQ8N1K5 641 aaPredicted RBP21.6■■□□□ 1.05
CCNE1-202ENST00000357943 KIF1BO60333 1816 aa21.6■■□□□ 1.05
CCNE1-202ENST00000357943 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
CCNE1-202ENST00000357943 KDM5AP29375 1690 aaKnown RBP21.58■■□□□ 1.04
CCNE1-202ENST00000357943 HSPA2P54652 639 aa21.58■■□□□ 1.04
CCNE1-202ENST00000357943 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
CCNE1-202ENST00000357943 TMEM2Q9UHN6 1383 aa21.56■■□□□ 1.04
CCNE1-202ENST00000357943 NEURL4Q96JN8 1562 aa21.55■■□□□ 1.04
CCNE1-202ENST00000357943 NUTM2DQ5VT03 806 aaPredicted RBP21.53■■□□□ 1.04
CCNE1-202ENST00000357943 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
CCNE1-202ENST00000357943 ZFYVE9O95405 1425 aa21.52■■□□□ 1.04
CCNE1-202ENST00000357943 RIMS2Q9UQ26 1411 aa21.52■■□□□ 1.04
CCNE1-202ENST00000357943 SLIT1O75093 1534 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms