RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
CAPN3-205ENST00000357568 ZNF518AQ6AHZ1 1483 aa14.47□□□□□ -0.09
CAPN3-205ENST00000357568 MBD5Q9P267 1494 aa14.47□□□□□ -0.09
CAPN3-205ENST00000357568 ZMYM4Q5VZL5 1548 aa14.47□□□□□ -0.09
CAPN3-205ENST00000357568 KDM5CP41229 1560 aa14.47□□□□□ -0.09
CAPN3-205ENST00000357568 FRMPD1Q5SYB0 1578 aa14.47□□□□□ -0.09
CAPN3-205ENST00000357568 IRX6P78412 446 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-205ENST00000357568 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-205ENST00000357568 DNMT1P26358 1616 aaKnown RBP14.46□□□□□ -0.09
CAPN3-205ENST00000357568 CCDC141Q6ZP82 1450 aa14.45□□□□□ -0.1
CAPN3-205ENST00000357568 CROCC2H7BZ55 1655 aa14.45□□□□□ -0.1
CAPN3-205ENST00000357568 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
CAPN3-205ENST00000357568 COL17A1Q9UMD9 1497 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-205ENST00000357568 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-205ENST00000357568 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-205ENST00000357568 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
CAPN3-205ENST00000357568 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
CAPN3-205ENST00000357568 TRAPPC8Q9Y2L5 1435 aa14.44□□□□□ -0.1
CAPN3-205ENST00000357568 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
CAPN3-205ENST00000357568 HECW2Q9P2P5 1572 aa14.42□□□□□ -0.1
CAPN3-205ENST00000357568 MLH3Q9UHC1 1453 aa14.42□□□□□ -0.1
CAPN3-205ENST00000357568 RTEL1-TNFRSF6BF6WH68 1400 aa14.42□□□□□ -0.1
CAPN3-205ENST00000357568 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
CAPN3-205ENST00000357568 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
CAPN3-205ENST00000357568 RPRD2Q5VT52 1461 aaKnown RBP14.42□□□□□ -0.1
CAPN3-205ENST00000357568 B4GALNT3Q6L9W6 998 aa14.41□□□□□ -0.1
CAPN3-205ENST00000357568 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
CAPN3-205ENST00000357568 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
CAPN3-205ENST00000357568 INO80Q9ULG1 1556 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-205ENST00000357568 DAPK1P53355 1430 aa14.41□□□□□ -0.1
CAPN3-205ENST00000357568 ANP32AP39687 249 aaKnown RBP14.41□□□□□ -0.1
CAPN3-205ENST00000357568 ABCC5O15440 1437 aa14.4□□□□□ -0.1
CAPN3-205ENST00000357568 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
CAPN3-205ENST00000357568 ARID4BQ4LE39 1312 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-205ENST00000357568 KIDINS220Q9ULH0 1771 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 ATP7AQ04656 1500 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 ROCK1Q13464 1354 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 RAPGEF3O95398 923 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 CCDC184Q52MB2 194 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 NUDCQ9Y266 331 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 ZFYVE16Q7Z3T8 1539 aa14.38□□□□□ -0.11
CAPN3-205ENST00000357568 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
CAPN3-205ENST00000357568 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
CAPN3-205ENST00000357568 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
CAPN3-205ENST00000357568 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
CAPN3-205ENST00000357568 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
CAPN3-205ENST00000357568 SPAG9O60271 1321 aaKnown RBP14.36□□□□□ -0.11
CAPN3-205ENST00000357568 ADGRL2O95490 1459 aa14.36□□□□□ -0.11
CAPN3-205ENST00000357568 C9orf84Q5VXU9 1444 aa14.36□□□□□ -0.11
CAPN3-205ENST00000357568 REREQ9P2R6 1566 aa14.36□□□□□ -0.11
CAPN3-205ENST00000357568 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-205ENST00000357568 ANKRD30BQ9BXX2 1392 aa14.35□□□□□ -0.11
CAPN3-205ENST00000357568 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 ABCA6Q8N139 1617 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-205ENST00000357568 L3MBTL2Q969R5 705 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
CAPN3-205ENST00000357568 KIF7Q2M1P5 1343 aa14.33□□□□□ -0.11
CAPN3-205ENST00000357568 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-205ENST00000357568 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
CAPN3-205ENST00000357568 C11orf95C9JLR9 678 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-205ENST00000357568 ATP10AO60312 1499 aa14.32□□□□□ -0.12
CAPN3-205ENST00000357568 ANKRD30AQ9BXX3 1397 aa14.31□□□□□ -0.12
CAPN3-205ENST00000357568 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
CAPN3-205ENST00000357568 ROCK2O75116 1388 aaKnown RBP14.31□□□□□ -0.12
CAPN3-205ENST00000357568 KTN1Q86UP2 1357 aaKnown RBP14.31□□□□□ -0.12
CAPN3-205ENST00000357568 YEATS2Q9ULM3 1422 aa14.3□□□□□ -0.12
CAPN3-205ENST00000357568 DUOX2Q9NRD8 1548 aa14.29□□□□□ -0.12
CAPN3-205ENST00000357568 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
CAPN3-205ENST00000357568 AGLP35573 1532 aa14.29□□□□□ -0.12
CAPN3-205ENST00000357568 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
CAPN3-205ENST00000357568 A2MP01023 1474 aa14.28□□□□□ -0.12
CAPN3-205ENST00000357568 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.12
CAPN3-205ENST00000357568 NBR1Q14596 966 aa14.27□□□□□ -0.13
CAPN3-205ENST00000357568 MS4A1P11836 297 aa14.26□□□□□ -0.13
CAPN3-205ENST00000357568 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
CAPN3-205ENST00000357568 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
CAPN3-205ENST00000357568 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
CAPN3-205ENST00000357568 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
CAPN3-205ENST00000357568 NBPF8Q3BBV2 869 aa14.25□□□□□ -0.13
CAPN3-205ENST00000357568 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
CAPN3-205ENST00000357568 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
CAPN3-205ENST00000357568 INSRP06213 1382 aa14.23□□□□□ -0.13
CAPN3-205ENST00000357568 UBE2Q2Q8WVN8 375 aa14.22□□□□□ -0.13
CAPN3-205ENST00000357568 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
CAPN3-205ENST00000357568 UHRF1BP1Q6BDS2 1440 aa14.22□□□□□ -0.13
CAPN3-205ENST00000357568 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-205ENST00000357568 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
CAPN3-205ENST00000357568 RNF17Q9BXT8 1623 aaKnown RBP14.21□□□□□ -0.13
CAPN3-205ENST00000357568 BRD4O60885 1362 aaPredicted RBP14.21□□□□□ -0.13
CAPN3-205ENST00000357568 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
CAPN3-205ENST00000357568 FAM135AQ9P2D6 1515 aa14.21□□□□□ -0.14
CAPN3-205ENST00000357568 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
CAPN3-205ENST00000357568 DEPDC5O75140 1603 aa14.19□□□□□ -0.14
CAPN3-205ENST00000357568 RALGAPBQ86X10 1494 aa14.19□□□□□ -0.14
CAPN3-205ENST00000357568 PZPP20742 1482 aa14.19□□□□□ -0.14
CAPN3-205ENST00000357568 ZBTB22O15209 634 aa14.18□□□□□ -0.14
CAPN3-205ENST00000357568 PDE3BQ13370 1112 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms