RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 IQCEQ6IPM2 695 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 CENPQQ7L2Z9 268 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 GTPBP4Q9BZE4 634 aaKnown RBP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 HOOK1Q9UJC3 728 aaKnown RBP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 ANKRD30AQ9BXX3 1397 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 FHAD1B1AJZ9 1412 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 GOLGA6L9A6NEM1 432 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 LIG1P18858 919 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 KAT6BQ8WYB5 2073 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 STAC3Q96MF2 364 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 IPO7O95373 1038 aaKnown RBP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 KIF20AO95235 890 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 HS1BP3Q53T59 392 aa5.74□□□□□ -1.49
SYNE2-203ENST00000357395 BCCIPQ9P287 314 aaKnown RBP eCLIP5.74□□□□□ -1.49
SYNE2-203ENST00000357395 TNIKQ9UKE5 1360 aa5.73□□□□□ -1.49
SYNE2-203ENST00000357395 HSPA5P11021 654 aaKnown RBP5.73□□□□□ -1.49
SYNE2-203ENST00000357395 RABEP1Q15276 862 aa5.73□□□□□ -1.49
SYNE2-203ENST00000357395 BCL11BQ9C0K0 894 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-203ENST00000357395 DYDC1Q8WWB3 177 aa5.73□□□□□ -1.49
SYNE2-203ENST00000357395 V9GYY5 206 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-203ENST00000357395 ZNF771Q7L3S4 317 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-203ENST00000357395 TMCO5BA8MYB1 307 aa5.73□□□□□ -1.49
SYNE2-203ENST00000357395 ZBTB7CA1YPR0 619 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 NAT10Q9H0A0 1025 aaKnown RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 RWDD1Q9H446 243 aaPredicted RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 TACO1Q9BSH4 297 aaKnown RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 CIZ1Q9ULV3 898 aaPredicted RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 MICALCLQ6ZW33 695 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 ZBED9Q6R2W3 1325 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 NUDCQ9Y266 331 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 RRP12Q5JTH9 1297 aaKnown RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 NUTM1Q86Y26 1132 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 NOC3LQ8WTT2 800 aaKnown RBP5.72□□□□□ -1.49
SYNE2-203ENST00000357395 GPATCH3Q96I76 525 aa5.72□□□□□ -1.49
SYNE2-203ENST00000357395 PRIMPOLQ96LW4 560 aa5.71□□□□□ -1.49
SYNE2-203ENST00000357395 ATAD2Q6PL18 1390 aa5.71□□□□□ -1.5
SYNE2-203ENST00000357395 PAXIP1Q6ZW49 1069 aaPredicted RBP5.71□□□□□ -1.5
SYNE2-203ENST00000357395 MIPOL1Q8TD10 442 aa5.71□□□□□ -1.5
SYNE2-203ENST00000357395 FAM161AQ3B820 660 aa5.71□□□□□ -1.5
SYNE2-203ENST00000357395 USH1CQ9Y6N9 552 aa5.71□□□□□ -1.5
SYNE2-203ENST00000357395 IVLP07476 585 aa5.71□□□□□ -1.5
SYNE2-203ENST00000357395 KIF3BO15066 747 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 TSR1Q2NL82 804 aaKnown RBP5.7□□□□□ -1.5
SYNE2-203ENST00000357395 TTLL5Q6EMB2 1281 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 MAP9Q49MG5 647 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 CWC22Q9HCG8 908 aaKnown RBP5.7□□□□□ -1.5
SYNE2-203ENST00000357395 ANKRD20A12PQ8NF67 263 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 POTEB2H3BUK9 544 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 CCDC50Q8IVM0 306 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 DYNC1I1O14576 645 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 DNAAF4Q8WXU2 420 aa5.7□□□□□ -1.5
SYNE2-203ENST00000357395 HOXA7P31268 230 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-203ENST00000357395 REC8O95072 547 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 CHMP5Q9NZZ3 219 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 DRC7Q8IY82 874 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 RNF214Q8ND24 703 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 SLKQ9H2G2 1235 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-203ENST00000357395 CENPHQ9H3R5 247 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 KIAA0754O94854 1291 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 SH2D4BQ5SQS7 431 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 SPATA24Q86W54 205 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 CEP164Q9UPV0 1460 aa5.69□□□□□ -1.5
SYNE2-203ENST00000357395 GOLGA6L19H0YKK7 550 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 PDE4CQ08493 712 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 C11orf95C9JLR9 678 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-203ENST00000357395 CCDC38Q502W7 563 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 STK31Q9BXU1 1019 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 BRD2P25440 801 aaKnown RBP5.68□□□□□ -1.5
SYNE2-203ENST00000357395 RUFY1Q96T51 708 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 SCAPERQ9BY12 1400 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 DHX29Q7Z478 1369 aaKnown RBP5.68□□□□□ -1.5
SYNE2-203ENST00000357395 LRRFIP1Q32MZ4 808 aaKnown RBP5.68□□□□□ -1.5
SYNE2-203ENST00000357395 NEMFO60524 1076 aa5.68□□□□□ -1.5
SYNE2-203ENST00000357395 IRX3P78415 501 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-203ENST00000357395 LUC7LQ9NQ29 371 aaKnown RBP5.67□□□□□ -1.5
SYNE2-203ENST00000357395 CGNL1Q0VF96 1302 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 ERLIN1O75477 346 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 WRNQ14191 1432 aaPredicted RBP eCLIP5.67□□□□□ -1.5
SYNE2-203ENST00000357395 LMOD3Q0VAK6 560 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 CCDC91Q7Z6B0 441 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 CCNB3Q8WWL7 1395 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.67□□□□□ -1.5
SYNE2-203ENST00000357395 TIGD1Q96MW7 591 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 WASHC2AQ641Q2 1341 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
SYNE2-203ENST00000357395 FAM13BQ9NYF5 915 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 DNAJC21Q5F1R6 531 aaKnown RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 FAM114A1Q8IWE2 563 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 AKNAQ7Z591 1439 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 NASPP49321 788 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 ANKRD18AQ8IVF6 992 aa5.66□□□□□ -1.5
SYNE2-203ENST00000357395 SRRTQ9BXP5 876 aaKnown RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 SALL2Q9Y467 1007 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-203ENST00000357395 CT47B1P0C2W7 299 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms