RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 KTN1Q86UP2 1357 aaKnown RBP23.31■■□□□ 1.32
KDM1A-201ENST00000356634 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
KDM1A-201ENST00000356634 KIF14Q15058 1648 aa23.29■■□□□ 1.32
KDM1A-201ENST00000356634 WDR62O43379 1518 aa23.29■■□□□ 1.32
KDM1A-201ENST00000356634 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
KDM1A-201ENST00000356634 NUP155O75694 1391 aa23.28■■□□□ 1.32
KDM1A-201ENST00000356634 C20orf194Q5TEA3 1177 aa23.27■■□□□ 1.32
KDM1A-201ENST00000356634 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
KDM1A-201ENST00000356634 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
KDM1A-201ENST00000356634 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
KDM1A-201ENST00000356634 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
KDM1A-201ENST00000356634 RGL3Q3MIN7 710 aa23.22■■□□□ 1.31
KDM1A-201ENST00000356634 ANKRD30AQ9BXX3 1397 aa23.22■■□□□ 1.31
KDM1A-201ENST00000356634 RGS3P49796 1198 aa23.22■■□□□ 1.31
KDM1A-201ENST00000356634 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
KDM1A-201ENST00000356634 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
KDM1A-201ENST00000356634 ANKRD50Q9ULJ7 1429 aa23.2■■□□□ 1.31
KDM1A-201ENST00000356634 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
KDM1A-201ENST00000356634 HNRNPMP52272 730 aaKnown RBP eCLIP23.19■■□□□ 1.36e-9■■■■□ 26.3
KDM1A-201ENST00000356634 NUP153P49790 1475 aaKnown RBP23.18■■□□□ 1.3
KDM1A-201ENST00000356634 DISP1Q96F81 1524 aa23.17■■□□□ 1.3
KDM1A-201ENST00000356634 UHRF1BP1Q6BDS2 1440 aa23.16■■□□□ 1.3
KDM1A-201ENST00000356634 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
KDM1A-201ENST00000356634 FRAT2O75474 233 aaPredicted RBP23.16■■□□□ 1.3
KDM1A-201ENST00000356634 NBPF1Q3BBV0 1214 aa23.14■■□□□ 1.29
KDM1A-201ENST00000356634 FAM161AQ3B820 660 aa23.14■■□□□ 1.29
KDM1A-201ENST00000356634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.291e-7■■□□□ 13.9
KDM1A-201ENST00000356634 PANK3Q9H999 370 aa23.13■■□□□ 1.29
KDM1A-201ENST00000356634 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
KDM1A-201ENST00000356634 CENPQQ7L2Z9 268 aaPredicted RBP23.12■■□□□ 1.29
KDM1A-201ENST00000356634 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
KDM1A-201ENST00000356634 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
KDM1A-201ENST00000356634 PER1O15534 1290 aaPredicted RBP23.11■■□□□ 1.29
KDM1A-201ENST00000356634 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
KDM1A-201ENST00000356634 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
KDM1A-201ENST00000356634 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
KDM1A-201ENST00000356634 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
KDM1A-201ENST00000356634 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
KDM1A-201ENST00000356634 C8orf34Q49A92 452 aa23.07■■□□□ 1.28
KDM1A-201ENST00000356634 GPATCH8Q9UKJ3 1502 aaKnown RBP23.07■■□□□ 1.28
KDM1A-201ENST00000356634 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
KDM1A-201ENST00000356634 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
KDM1A-201ENST00000356634 ADGBQ8N7X0 1667 aa23.04■■□□□ 1.28
KDM1A-201ENST00000356634 ARHGEF12Q9NZN5 1544 aa23.04■■□□□ 1.28
KDM1A-201ENST00000356634 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
KDM1A-201ENST00000356634 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
KDM1A-201ENST00000356634 KIAA0556O60303 1618 aa23.02■■□□□ 1.28
KDM1A-201ENST00000356634 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
KDM1A-201ENST00000356634 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
KDM1A-201ENST00000356634 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
KDM1A-201ENST00000356634 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
KDM1A-201ENST00000356634 BLMP54132 1417 aaPredicted RBP23■■□□□ 1.27
KDM1A-201ENST00000356634 E9PCH4 1651 aa22.99■■□□□ 1.27
KDM1A-201ENST00000356634 ARXQ96QS3 562 aa22.99■■□□□ 1.27
KDM1A-201ENST00000356634 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
KDM1A-201ENST00000356634 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
KDM1A-201ENST00000356634 TMF1P82094 1093 aa22.98■■□□□ 1.27
KDM1A-201ENST00000356634 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
KDM1A-201ENST00000356634 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
KDM1A-201ENST00000356634 ITSN2Q9NZM3 1697 aa22.96■■□□□ 1.27
KDM1A-201ENST00000356634 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
KDM1A-201ENST00000356634 PLEKHH1Q9ULM0 1364 aa22.96■■□□□ 1.27
KDM1A-201ENST00000356634 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
KDM1A-201ENST00000356634 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
KDM1A-201ENST00000356634 TESK2Q96S53 571 aa22.94■■□□□ 1.26
KDM1A-201ENST00000356634 ZMYM4Q5VZL5 1548 aa22.94■■□□□ 1.26
KDM1A-201ENST00000356634 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
KDM1A-201ENST00000356634 POGKQ9P215 609 aa22.92■■□□□ 1.26
KDM1A-201ENST00000356634 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
KDM1A-201ENST00000356634 UBE2Q2Q8WVN8 375 aa22.9■■□□□ 1.26
KDM1A-201ENST00000356634 CARMIL2Q6F5E8 1435 aa22.9■■□□□ 1.26
KDM1A-201ENST00000356634 BCAR3O75815 825 aa22.9■■□□□ 1.26
KDM1A-201ENST00000356634 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
KDM1A-201ENST00000356634 ERBINQ96RT1 1412 aa22.9■■□□□ 1.26
KDM1A-201ENST00000356634 CROCC2H7BZ55 1655 aa22.89■■□□□ 1.26
KDM1A-201ENST00000356634 COL17A1Q9UMD9 1497 aaPredicted RBP22.88■■□□□ 1.25
KDM1A-201ENST00000356634 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
KDM1A-201ENST00000356634 FAM43AQ8N2R8 423 aa22.88■■□□□ 1.25
KDM1A-201ENST00000356634 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
KDM1A-201ENST00000356634 KDM5DQ9BY66 1539 aa22.85■■□□□ 1.25
KDM1A-201ENST00000356634 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
KDM1A-201ENST00000356634 APAF1O14727 1248 aa22.84■■□□□ 1.25
KDM1A-201ENST00000356634 IGHDP01880 384 aa22.84■■□□□ 1.25
KDM1A-201ENST00000356634 SEC24BO95487 1268 aa22.84■■□□□ 1.25
KDM1A-201ENST00000356634 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
KDM1A-201ENST00000356634 BECN1Q14457 450 aa22.84■■□□□ 1.25
KDM1A-201ENST00000356634 ATP10BO94823 1461 aa22.83■■□□□ 1.25
KDM1A-201ENST00000356634 SPINK5Q9NQ38 1064 aaPredicted RBP22.83■■□□□ 1.25
KDM1A-201ENST00000356634 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
KDM1A-201ENST00000356634 INSRP06213 1382 aa22.82■■□□□ 1.24
KDM1A-201ENST00000356634 PTPRGP23470 1445 aa22.82■■□□□ 1.24
KDM1A-201ENST00000356634 FAM135AQ9P2D6 1515 aa22.8■■□□□ 1.24
KDM1A-201ENST00000356634 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
KDM1A-201ENST00000356634 COG6Q9Y2V7 657 aa22.79■■□□□ 1.24
KDM1A-201ENST00000356634 A2MP01023 1474 aa22.78■■□□□ 1.24
KDM1A-201ENST00000356634 ZNF521Q96K83 1311 aa22.78■■□□□ 1.24
KDM1A-201ENST00000356634 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
KDM1A-201ENST00000356634 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
KDM1A-201ENST00000356634 GPRASP1Q5JY77 1395 aa22.77■■□□□ 1.24
KDM1A-201ENST00000356634 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms