RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CCDC146Q8IYE0 955 aa19.96■□□□□ 0.79
RXRA-201ENST00000356384 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
RXRA-201ENST00000356384 HDAC5Q9UQL6 1122 aa19.95■□□□□ 0.78
RXRA-201ENST00000356384 PHF14O94880 888 aa19.95■□□□□ 0.78
RXRA-201ENST00000356384 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
RXRA-201ENST00000356384 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
RXRA-201ENST00000356384 ST18O60284 1047 aa19.94■□□□□ 0.78
RXRA-201ENST00000356384 USP35Q9P2H5 1018 aa19.94■□□□□ 0.78
RXRA-201ENST00000356384 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
RXRA-201ENST00000356384 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
RXRA-201ENST00000356384 FRAT2O75474 233 aaPredicted RBP19.93■□□□□ 0.78
RXRA-201ENST00000356384 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
RXRA-201ENST00000356384 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
RXRA-201ENST00000356384 TPD52L1Q16890 204 aaPredicted RBP19.91■□□□□ 0.78
RXRA-201ENST00000356384 CCAR2Q8N163 923 aaKnown RBP19.9■□□□□ 0.78
RXRA-201ENST00000356384 KIF3AQ9Y496 699 aa19.9■□□□□ 0.78
RXRA-201ENST00000356384 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
RXRA-201ENST00000356384 H3BQV1 296 aa19.89■□□□□ 0.77
RXRA-201ENST00000356384 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
RXRA-201ENST00000356384 TSHZ2Q9NRE2 1034 aa19.88■□□□□ 0.77
RXRA-201ENST00000356384 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
RXRA-201ENST00000356384 FOXD4L6Q3SYB3 417 aaPredicted RBP19.87■□□□□ 0.77
RXRA-201ENST00000356384 FOXD4L3Q6VB84 417 aaPredicted RBP19.87■□□□□ 0.77
RXRA-201ENST00000356384 LTV1Q96GA3 475 aaPredicted RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 HSP90AA2PQ14568 343 aaPredicted RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 TSR1Q2NL82 804 aaKnown RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
RXRA-201ENST00000356384 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
RXRA-201ENST00000356384 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
RXRA-201ENST00000356384 RILPL2Q969X0 211 aa19.85■□□□□ 0.77
RXRA-201ENST00000356384 GOLGA6L19H0YKK7 550 aa19.84■□□□□ 0.77
RXRA-201ENST00000356384 AMPHP49418 695 aa19.84■□□□□ 0.77
RXRA-201ENST00000356384 FAM184AQ8NB25 1140 aa19.84■□□□□ 0.77
RXRA-201ENST00000356384 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
RXRA-201ENST00000356384 PATL2C9JE40 543 aaKnown RBP19.83■□□□□ 0.76
RXRA-201ENST00000356384 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.76
RXRA-201ENST00000356384 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.76
RXRA-201ENST00000356384 DDX49Q9Y6V7 483 aaKnown RBP19.83■□□□□ 0.76
RXRA-201ENST00000356384 NGDNQ8NEJ9 315 aaKnown RBP19.82■□□□□ 0.76
RXRA-201ENST00000356384 BECN2A8MW95 431 aa19.82■□□□□ 0.76
RXRA-201ENST00000356384 NUP155O75694 1391 aa19.82■□□□□ 0.76
RXRA-201ENST00000356384 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
RXRA-201ENST00000356384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.81■□□□□ 0.76
RXRA-201ENST00000356384 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
RXRA-201ENST00000356384 SLC4A3P48751 1232 aa19.8■□□□□ 0.76
RXRA-201ENST00000356384 AKAP17AQ02040 695 aaKnown RBP19.79■□□□□ 0.76
RXRA-201ENST00000356384 TPM1P09493 284 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 FBXO3Q9UK99 471 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 TPM2P07951 284 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 ZNF592Q92610 1267 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 ANKRD45Q5TZF3 282 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 MCTP1Q6DN14 999 aa19.78■□□□□ 0.76
RXRA-201ENST00000356384 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
RXRA-201ENST00000356384 ELL2O00472 640 aaPredicted RBP19.77■□□□□ 0.76
RXRA-201ENST00000356384 KIF3BO15066 747 aa19.77■□□□□ 0.76
RXRA-201ENST00000356384 PDE3BQ13370 1112 aa19.76■□□□□ 0.75
RXRA-201ENST00000356384 ATP6V1DQ9Y5K8 247 aa19.76■□□□□ 0.75
RXRA-201ENST00000356384 CCDC70Q6NSX1 233 aa19.76■□□□□ 0.75
RXRA-201ENST00000356384 BCL2L13Q9BXK5 485 aa19.75■□□□□ 0.75
RXRA-201ENST00000356384 GPS2Q13227 327 aa19.75■□□□□ 0.75
RXRA-201ENST00000356384 PCMTD1Q96MG8 357 aaPredicted RBP19.73■□□□□ 0.75
RXRA-201ENST00000356384 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
RXRA-201ENST00000356384 SYNE3Q6ZMZ3 975 aa19.73■□□□□ 0.75
RXRA-201ENST00000356384 RSPH6AQ9H0K4 717 aa19.73■□□□□ 0.75
RXRA-201ENST00000356384 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
RXRA-201ENST00000356384 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
RXRA-201ENST00000356384 RAD21O60216 631 aa19.72■□□□□ 0.75
RXRA-201ENST00000356384 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
RXRA-201ENST00000356384 ZNF771Q7L3S4 317 aaPredicted RBP19.72■□□□□ 0.75
RXRA-201ENST00000356384 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
RXRA-201ENST00000356384 FAM161AQ3B820 660 aa19.71■□□□□ 0.75
RXRA-201ENST00000356384 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 CHMP4CQ96CF2 233 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 CENPQQ7L2Z9 268 aaPredicted RBP19.7■□□□□ 0.74
RXRA-201ENST00000356384 DIAPH3Q9NSV4 1193 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 PLIN1O60240 522 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 PDE4AP27815 886 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
RXRA-201ENST00000356384 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■■■■□ 25.7
RXRA-201ENST00000356384 GSE1Q14687 1217 aa19.69■□□□□ 0.74
RXRA-201ENST00000356384 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
RXRA-201ENST00000356384 TCEAL9Q9UHQ7 104 aa19.69■□□□□ 0.74
RXRA-201ENST00000356384 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
RXRA-201ENST00000356384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.68■□□□□ 0.74
RXRA-201ENST00000356384 IPO7O95373 1038 aaKnown RBP19.68■□□□□ 0.74
RXRA-201ENST00000356384 TRIM29Q14134 588 aa19.67■□□□□ 0.74
RXRA-201ENST00000356384 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
RXRA-201ENST00000356384 CPLX2Q6PUV4 134 aaKnown RBP19.67■□□□□ 0.74
RXRA-201ENST00000356384 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
RXRA-201ENST00000356384 NGEFQ8N5V2 710 aa19.66■□□□□ 0.74
RXRA-201ENST00000356384 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
RXRA-201ENST00000356384 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
RXRA-201ENST00000356384 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
RXRA-201ENST00000356384 HOMER1Q86YM7 354 aa19.65■□□□□ 0.74
RXRA-201ENST00000356384 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
RXRA-201ENST00000356384 C1orf141Q5JVX7 400 aa19.64■□□□□ 0.73
RXRA-201ENST00000356384 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms