RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SCAPERQ9BY12 1400 aa6.22□□□□□ -1.41
CNOT4-202ENST00000356162 MAGI2Q86UL8 1455 aa6.22□□□□□ -1.41
CNOT4-202ENST00000356162 ZFYVE16Q7Z3T8 1539 aa6.22□□□□□ -1.41
CNOT4-202ENST00000356162 KIAA1107Q9UPP5 1409 aa6.22□□□□□ -1.41
CNOT4-202ENST00000356162 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
CNOT4-202ENST00000356162 CAMSAP2Q08AD1 1489 aa6.21□□□□□ -1.41
CNOT4-202ENST00000356162 ARHGEF5Q12774 1597 aa6.21□□□□□ -1.41
CNOT4-202ENST00000356162 INO80Q9ULG1 1556 aaPredicted RBP6.21□□□□□ -1.41
CNOT4-202ENST00000356162 MIA2Q96PC5 1412 aa6.21□□□□□ -1.42
CNOT4-202ENST00000356162 ARHGEF12Q9NZN5 1544 aa6.21□□□□□ -1.42
CNOT4-202ENST00000356162 PAK3O75914 559 aaPredicted RBP6.21□□□□□ -1.42
CNOT4-202ENST00000356162 REREQ9P2R6 1566 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 CLCN6P51797 869 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 DIP2CQ9Y2E4 1556 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 PTPN23Q9H3S7 1636 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 CROCC2H7BZ55 1655 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 KANK4Q5T7N3 995 aaPredicted RBP6.2□□□□□ -1.42
CNOT4-202ENST00000356162 MLH3Q9UHC1 1453 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 ABCA6Q8N139 1617 aa6.2□□□□□ -1.42
CNOT4-202ENST00000356162 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
CNOT4-202ENST00000356162 TRAPPC8Q9Y2L5 1435 aa6.19□□□□□ -1.42
CNOT4-202ENST00000356162 TCOF1Q13428 1488 aaKnown RBP6.19□□□□□ -1.42
CNOT4-202ENST00000356162 MAST1Q9Y2H9 1570 aa6.19□□□□□ -1.42
CNOT4-202ENST00000356162 KIDINS220Q9ULH0 1771 aa6.19□□□□□ -1.42
CNOT4-202ENST00000356162 CCDC141Q6ZP82 1450 aa6.19□□□□□ -1.42
CNOT4-202ENST00000356162 ATP7AQ04656 1500 aa6.19□□□□□ -1.42
CNOT4-202ENST00000356162 MBD5Q9P267 1494 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 C9orf84Q5VXU9 1444 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 FGD6Q6ZV73 1430 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 ZBTB47Q9UFB7 747 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-202ENST00000356162 ADGBQ8N7X0 1667 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 RAPGEF3O95398 923 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 YEATS2Q9ULM3 1422 aa6.18□□□□□ -1.42
CNOT4-202ENST00000356162 DNMT1P26358 1616 aaKnown RBP6.17□□□□□ -1.42
CNOT4-202ENST00000356162 SHANK2Q9UPX8 1470 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 BCORL1Q5H9F3 1711 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 PHF12Q96QT6 1004 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 PLXNC1O60486 1568 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 ATP10AO60312 1499 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 SIGLEC1Q9BZZ2 1709 aa6.17□□□□□ -1.42
CNOT4-202ENST00000356162 VASPP50552 380 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-202ENST00000356162 RASEFQ8IZ41 740 aa6.16□□□□□ -1.42
CNOT4-202ENST00000356162 ZNF777Q9ULD5 760 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-202ENST00000356162 RTEL1-TNFRSF6BF6WH68 1400 aa6.16□□□□□ -1.42
CNOT4-202ENST00000356162 AGLP35573 1532 aa6.16□□□□□ -1.42
CNOT4-202ENST00000356162 TSPYL2Q9H2G4 693 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-202ENST00000356162 ADAMTSL3P82987 1691 aa6.16□□□□□ -1.42
CNOT4-202ENST00000356162 NUBP1P53384 320 aa6.15□□□□□ -1.42
CNOT4-202ENST00000356162 SPAG9O60271 1321 aaKnown RBP6.15□□□□□ -1.43
CNOT4-202ENST00000356162 RSPH4AQ5TD94 716 aa6.14□□□□□ -1.43
CNOT4-202ENST00000356162 CCDC61Q9Y6R9 512 aa6.14□□□□□ -1.43
CNOT4-202ENST00000356162 ZNF644Q9H582 1327 aaPredicted RBP6.14□□□□□ -1.43
CNOT4-202ENST00000356162 HNRNPMP52272 730 aaKnown RBP eCLIP6.14□□□□□ -1.43
CNOT4-202ENST00000356162 AFAP1Q8N556 730 aa6.14□□□□□ -1.43
CNOT4-202ENST00000356162 FER1L4A9Z1Z3 1794 aa6.14□□□□□ -1.43
CNOT4-202ENST00000356162 EIF2AK4Q9P2K8 1649 aaKnown RBP6.14□□□□□ -1.43
CNOT4-202ENST00000356162 DAPK1P53355 1430 aa6.14□□□□□ -1.43
CNOT4-202ENST00000356162 GALR2O43603 387 aaPredicted RBP6.13□□□□□ -1.43
CNOT4-202ENST00000356162 A2MP01023 1474 aa6.13□□□□□ -1.43
CNOT4-202ENST00000356162 FAM135AQ9P2D6 1515 aa6.13□□□□□ -1.43
CNOT4-202ENST00000356162 MADDQ8WXG6 1647 aa6.13□□□□□ -1.43
CNOT4-202ENST00000356162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.13□□□□□ -1.43
CNOT4-202ENST00000356162 ABCC5O15440 1437 aa6.13□□□□□ -1.43
CNOT4-202ENST00000356162 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
CNOT4-202ENST00000356162 POTEIP0CG38 1075 aa6.12□□□□□ -1.43
CNOT4-202ENST00000356162 ADGRL2O95490 1459 aa6.12□□□□□ -1.43
CNOT4-202ENST00000356162 RNF17Q9BXT8 1623 aaKnown RBP6.12□□□□□ -1.43
CNOT4-202ENST00000356162 RIMS1Q86UR5 1692 aaKnown RBP6.12□□□□□ -1.43
CNOT4-202ENST00000356162 DUOX2Q9NRD8 1548 aa6.11□□□□□ -1.43
CNOT4-202ENST00000356162 MROH2AA6NES4 1674 aa6.11□□□□□ -1.43
CNOT4-202ENST00000356162 MYT1LQ9UL68 1186 aa6.11□□□□□ -1.43
CNOT4-202ENST00000356162 ZC3H13Q5T200 1668 aaKnown RBP6.1□□□□□ -1.43
CNOT4-202ENST00000356162 DHX29Q7Z478 1369 aaKnown RBP6.1□□□□□ -1.43
CNOT4-202ENST00000356162 ERBINQ96RT1 1412 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 TSPY4P0CV99 314 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 TSPY10P0CW01 314 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 KIF12Q96FN5 646 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 MS4A3Q96HJ5 214 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 DCBLD2Q96PD2 775 aa6.1□□□□□ -1.43
CNOT4-202ENST00000356162 ARID4BQ4LE39 1312 aaPredicted RBP6.09□□□□□ -1.43
CNOT4-202ENST00000356162 DEPDC5O75140 1603 aa6.09□□□□□ -1.43
CNOT4-202ENST00000356162 KDM4FA0A1W2PPD8 638 aa6.09□□□□□ -1.43
CNOT4-202ENST00000356162 ANKRD30AQ9BXX3 1397 aa6.09□□□□□ -1.43
CNOT4-202ENST00000356162 CNTLNQ9NXG0 1405 aa6.09□□□□□ -1.43
CNOT4-202ENST00000356162 GCC2Q8IWJ2 1684 aa6.09□□□□□ -1.44
CNOT4-202ENST00000356162 PRDM15P57071 1507 aaPredicted RBP6.09□□□□□ -1.44
CNOT4-202ENST00000356162 FAM212AQ96EL1 285 aa6.09□□□□□ -1.44
CNOT4-202ENST00000356162 MROH1Q8NDA8 1641 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 KIF15Q9NS87 1388 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 PTPRMP28827 1452 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 KDM5DQ9BY66 1539 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 FAM50AQ14320 339 aaKnown RBP6.08□□□□□ -1.44
CNOT4-202ENST00000356162 KLHL34Q8N239 644 aa6.08□□□□□ -1.44
CNOT4-202ENST00000356162 CLTCQ00610 1675 aaKnown RBP6.08□□□□□ -1.44
CNOT4-202ENST00000356162 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
CNOT4-202ENST00000356162 C3P01024 1663 aa6.07□□□□□ -1.44
CNOT4-202ENST00000356162 PPARGC1BQ86YN6 1023 aaKnown RBP6.07□□□□□ -1.44
CNOT4-202ENST00000356162 IFNLR1Q8IU57 520 aaPredicted RBP6.07□□□□□ -1.44
CNOT4-202ENST00000356162 UNC13BO14795 1591 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms